EWM21389.1, cds9278 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|585101606|gb|EWM21389.1| (Cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0 Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0 Query: 1 MGIDLHLPLPDLPPNMAWGGMLEAYFANAEALAELAAAARSAGVSKQTVVEVVALLVVSAITYYRMYHQLPYPPDPAREPRLRPCPLQTEATEDEHVVPQGFSHEGQPASEPTASLPAILNHLYATLAAARLHAPPTLPLPSLPSLAMDPLTSFPAKLLAEMQEKLAAVVKEGEEAEWAWLCLLLQRVLHKEDGTDGDRETGQTSLATRMLSAAMAQCRPFRWPGEGPGQGLGEGGREEGRERVEGKPAQSMFGWPIADTTTHDDVCDIDTEEAEAAAEAAAAAAAALAAASKAVPPPHFLSTGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGEGEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPPPPQGVGHTEACVLHSVKEALREGRAGIEGRKEGGKGGGRALMGRGGAAGAVSTLAAHLSEQAAMMMRRGGGAAVVEVGGGGRVEEVGQVHRDGLLHHVSEWLLPPVVPGGGG 582 MGIDLHLPLPDLPPNMAWGGMLEAYFANAEALAELAAAARSAGVSKQTVVEVVALLVVSAITYYRMYHQLPYPPDPAREPRLRPCPLQTEATEDEHVVPQGFSHEGQPASEPTASLPAILNHLYATLAAARLHAPPTLPLPSLPSLAMDPLTSFPAKLLAEMQEKLAAVVKEGEEAEWAWLCLLLQRVLHKEDGTDGDRETGQTSLATRMLSAAMAQCRPFRWPGEGPGQGLGEGGREEGRERVEGKPAQSMFGWPIADTTTHDDVCDIDTEEAEAAAEAAAAAAAALAAASKAVPPPHFLSTGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGEGEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPPPPQGVGHTEACVLHSVKEALREGRAGIEGRKEGGKGGGRALMGRGGAAGAVSTLAAHLSEQAAMMMRRGGGAAVVEVGGGGRVEEVGQVHRDGLLHHVSEWLLPPVVPGGGG Sbjct: 1 MGIDLHLPLPDLPPNMAWGGMLEAYFANAEALAELAAAARSAGVSKQTVVEVVALLVVSAITYYRMYHQLPYPPDPAREPRLRPCPLQTEATEDEHVVPQGFSHEGQPASEPTASLPAILNHLYATLAAARLHAPPTLPLPSLPSLAMDPLTSFPAKLLAEMQEKLAAVVKEGEEAEWAWLCLLLQRVLHKEDGTDGDRETGQTSLATRMLSAAMAQCRPFRWPGEGPGQGLGEGGREEGRERVEGKPAQSMFGWPIADTTTHDDVCDIDTEEAEAAAEAAAAAAAALAAASKAVPPPHFLSTGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGEGEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIVPPPPQGVGHTEACVLHSVKEALREGRAGIEGRKEGGKGGGRALMGRGGAAGAVSTLAAHLSEQAAMMMRRGGGAAVVEVGGGGRVEEVGQVHRDGLLHHVSEWLLPPVVPGGGG 582
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|553187906|ref|XP_005854704.1| (hypothetical protein NGA_0367500 [Nannochloropsis gaditana CCMP526] >gi|422294360|gb|EKU21660.1| hypothetical protein NGA_0367500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 152.525 bits (384), Expect = 2.191e-40 Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0 Query: 385 GGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQA-RAMMADF 465 G WRHFYSVFELEWAAWLCAGRNRE+SCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGH +A R + A F Sbjct: 38 GSWRHFYSVFELEWAAWLCAGRNREESCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHRGRAYRGLRAPF 119
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|1210515034|dbj|GAX25997.1| (hypothetical protein FisN_4Hu508 [Fistulifera solaris]) HSP 1 Score: 107.457 bits (267), Expect = 2.804e-21 Identity = 57/169 (33.73%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 304 GLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGE----GEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIV 468 LP + Q+ ++ +L PRD++ + V++A RL + VW+T W + + V+ ++ R A+ G + + + FY F L +L AG+N D C VG+ G +YDL+ FL +HPGS ET++ +AG DAT FF + HSA AR + C+V Sbjct: 171 SLPLDAQIHMLSFLHPRDIVNVACVNKACNRLIDEGPSSSLVWKTIWNRDYAWL-----VESWDIGRLAKERSGIEPNFS--------KDFYFRFSLASTNYLLAGQNNYDRCLVGIGGHIYDLSLFLAVHPGSPETVMAHAGQDATDFFARINHSAGARQIAKSHCVV 326
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|1072228507|gb|OEU13242.1| (hypothetical protein FRACYDRAFT_241578 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 102.449 bits (254), Expect = 3.547e-20 Identity = 55/171 (32.16%), Postives = 91/171 (53.22%), Query Frame = 0 Query: 304 GLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGEGEQ------VWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIV 468 G+P +V ++I +L PRDV+ L+ VS+A + + +W+T W + I V + + ++A R++ T + FY +F + ++ AG N +C VG+ +YD+T FL HPGS +T++V++G DAT FF D+GHS AR + C+V Sbjct: 135 GIPPDVHVQIASFLHPRDVVTLSCVSKAYHTITDESNNTTSVAIWKTLWNRDYSWI-----VYQWTIGKQAFL----RSNCTQWSYS---KDFYFLFGQSYLDYVIAGHNTLTNCLVGIHSNIYDITPFLFSHPGSPDTLMVHSGRDATRFFDDMGHSTGARRIAMSMCVV 293
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|219127913|ref|XP_002184170.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404401|gb|EEC44348.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.3673 bits (246), Expect = 1.341e-18 Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 0 Query: 303 TGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGE----GEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCI 467 T LP + + I+ +L P+DV+ V ++ + E E +W++ W + + + + R A G D E FY +F L + ++ AG+N DSC +GL G +YDLT FL HPGS ET++V AG D+T+FF + HS+ AR + C+ Sbjct: 159 TRLPPDALVNILSFLLPKDVVSFACVDKSCQDAVECGETSEALWKSLWHRDYAWL-----IHAWTIGRGAFDRSGLVPPIYDKE-------FYFLFGLSYLNYVLAGQNTFDSCLIGLNGHIYDLTPFLMNHPGSPETVMVQAGRDSTSFFHSIRHSSGARKIAQSLCV 315
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|219130219|ref|XP_002185268.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403447|gb|EEC43400.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 98.9821 bits (245), Expect = 1.417e-18 Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 0 Query: 303 TGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRLGE----GEQVWRTKWAARFGPIWRSAPVQKAEMARKARRADGQRASATDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCI 467 T LP + + I+ +L P+DV+ V ++ + E E +W++ W + + + + R A G D E FY +F L + ++ AG+N DSC +GL G +YDLT FL HPGS ET++V AG D+T+FF + HS+ AR + C+ Sbjct: 159 TRLPPDALVNILSFLLPKDVVSFACVDKSCQDAVECGETSEALWKSLWHRDYAWL-----IHAWTIGRGAFDRSGLVPPIYDKE-------FYFLFGLSYLNYVLAGQNTFDSCLIGLNGHIYDLTPFLMNHPGSPETVMVQAGRDSTSFFHSIRHSSGARKIAQSLCV 315
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|224000720|ref|XP_002290032.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973454|gb|EED91784.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 87.8113 bits (216), Expect = 1.520e-14 Identity = 58/226 (25.66%), Postives = 91/226 (40.27%), Query Frame = 0 Query: 299 HFLSTGLPDEVQLEIVEYLQPRDVLRLTPVSRAARRL-----------GEGEQ---------VWRTKWAARFGPIWRSAPVQKAEMARKARR----------------------------------ADGQRASA--TDGEMEGGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCIV 468 +F + LP + ++ I +L P+DVL T +RA RR+ E + +W+ + F + + K AR + +DG A T G + + Y F W + AG N + C +GL V+D++ F++ HPGS ET+L+ AG DAT FF+ +GHS AR + C+V Sbjct: 285 NFDISLLPSDAEILIFSFLHPKDVLNFTCTNRAGRRMLDDGLAIANEKTESQHDKAGDSALLIWKALFQRDFAWVLSDWKIGKEAFARSMIKYKLRGWQEEFSSSDEESHGGRVMQHLLSSVGESTSDGANALLPPTYGSTQISMKELYFTFAEAWLNYTIAGCNSTEKCLIGLHNHVFDISNFVDSHPGSTETLLLQAGKDATVFFESMGHSMGARKLALSMCVV 510
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|1150138420|ref|XP_020212890.1| (cytochrome b5 [Cajanus cajan] >gi|1012358633|gb|KYP69817.1| putative cytochrome b5 isoform 2 [Cajanus cajan]) HSP 1 Score: 77.411 bits (189), Expect = 2.160e-13 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 389 HFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCI----VPPP 471 +FY++ EL + N +D CW+ ++G VYD+T +L+ HPG + IL G DAT F+DVGHS AR +M +CI PP Sbjct: 6 NFYAIEEL-------SQHNTKDDCWILVDGKVYDVTQYLDDHPGGDDVILATTGKDATEEFEDVGHSKSARELMEQYCIGELDTSPP 85
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|1174754103|gb|OQV22110.1| (putative Cytochrome b5 [Hypsibius dujardini]) HSP 1 Score: 77.7962 bits (190), Expect = 2.558e-13 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0 Query: 404 AGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCI 467 A N +D CW+ + G VYD+T FLE HPG +E ++ N+G DAT F+DVGHS AR MM D+ I Sbjct: 18 ASHNNKDDCWLIINGKVYDVTKFLEEHPGGEEVLIENSGRDATENFEDVGHSTDAREMMKDYLI 81
BLAST of EWM21389.1 vs. NCBI_GenBank
Match: gi|1009149645|ref|XP_015892588.1| (PREDICTED: cytochrome b5 [Ziziphus jujuba]) HSP 1 Score: 77.0258 bits (188), Expect = 2.946e-13 Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 0 Query: 385 GGWRHFYSVFELEWAAWLCAGRNREDSCWVGLEGGVYDLTAFLEIHPGSKETILVNAGGDATAFFQDVGHSAQARAMMADFCI 467 GG R YS+ ++ + N ++CW+ +EG V+D+T FLE HPG E +L G DAT F+DVGHS ARAMM +F + Sbjct: 2 GGERKVYSLAQV-------SAHNSRENCWLVIEGKVFDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSTSARAMMDEFYV 77 The following BLAST results are available for this feature:
BLAST of EWM21389.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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