EWM21399.1, cds9274 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|585101619|gb|EWM21399.1| (atp-binding cassette superfamily, partial [Nannochloropsis gaditana]) HSP 1 Score: 1582.39 bits (4096), Expect = 0.000e+0 Identity = 805/805 (100.00%), Postives = 805/805 (100.00%), Query Frame = 0
Query: 1 PHTPSLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDEGEGKVGWEMGEGMEGKERKEEAREKKAGKEEGPRGRLSPLSSPPSPPLPPPPLSLPPPPPPPPPPPPPPPPPPPPPPSSSSHLQDVLADTGRLGGRVGGREVFDRLPPPPPVTLAFENVSYTVPAPRSPCLPWRAGGRAGRRAE 805
PHTPSLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDEGEGKVGWEMGEGMEGKERKEEAREKKAGKEEGPRGRLSPLSSPPSPPLPPPPLSLPPPPPPPPPPPPPPPPPPPPPPSSSSHLQDVLADTGRLGGRVGGREVFDRLPPPPPVTLAFENVSYTVPAPRSPCLPWRAGGRAGRRAE
Sbjct: 1 PHTPSLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDEGEGKVGWEMGEGMEGKERKEEAREKKAGKEEGPRGRLSPLSSPPSPPLPPPPLSLPPPPPPPPPPPPPPPPPPPPPPSSSSHLQDVLADTGRLGGRVGGREVFDRLPPPPPVTLAFENVSYTVPAPRSPCLPWRAGGRAGRRAE 805
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|585109399|gb|EWM27219.1| (abc transporter g family member 29 [Nannochloropsis gaditana]) HSP 1 Score: 437.573 bits (1124), Expect = 4.459e-131 Identity = 257/656 (39.18%), Postives = 368/656 (56.10%), Query Frame = 0
Query: 6 LTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTT--TEAFESAFLASSHGQSLASSLSSPSPS-----LPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVN 654
L+G V YN A S FH+ +L C V D P LTV ETL+F+GAC+ P+PT L + AL + SL + L G + RP R A + + E +++LL L C T +GDA RG+SGGERRR++L E LMG+++VTC DEISNGLDSA+ DIVR+ RA + + S+++L QPAPEV+ALFD VLVLR+G LV+QG P GYFE LGF P VADF++ +T P+ SF E ++T S P + F + F+ A + S H ++ +S + S S L +W +E+R F W+ S ++ HR+F L RD S + +R LQ + LG +TG ++ + +A +T FGALYQ++LT+AFQTAA +P+Y R +FYKQ+ AG+F+C LLAST PLV++D++LFG +VY+ GF G H FL +L +GWAMM+FF+ T+L +LT AA +G++TFF LLFSGFI+ +P + W+M+ +P+FY +Q LA NEF+ + Y +P S+ I G +L Q+GLF + W + G NL + + Y+ +T +AM + W +PV+
Sbjct: 247 LSGSVLYNGEEA--------GSGGFHMTSLACFVEEVDNNEPLLTVRETLVFSGACIAPVPTRKLLQTDYGRALVE------------------SLDVDEATKKELRACRG--VGRPKIRYALARQKAETVMTLLGLQGCADTIIGDASRRGVSGGERRRVTLAEVLMGEYSVTCLDEISNGLDSAAAFDIVRMARASVQAFQYCSIIALNQPAPEVLALFDQVLVLRKGALVYQGPPDEAKGYFE-GLGFRCPPRTDVADFLVG-VTGPAFKSF-RASLDELAETGISPAQVQWPGSTKDFVQRFRKSEPGRHLFQEATM-SPHKKANSSIKTESSDSGIRRILEAAWRENEQRKFY-NTWMTSFVICFHREFKLTFRDRSYVVSRILQDIFLGALTGLVFLNLRTEAV-ATRFGALYQSLLTIAFQTAACIPAYFVRRHVFYKQKNAGFFSCSSYLLASTTASAPLVLLDAVLFGTLVYWCAGFARDQH-------------GLHFFVFLAHLTMVGWAMMSFFKLTTFLTANLTSAAAASGIVTFFLLLFSGFIISVKDVPNFYTWVMFLNPLFYGFQGLAVNEFIAK-NYGALLPGSTETI--GETVLGQKGLFTNARWVWLGLLANLGITLFYLCLTLVAMMYLEWLQPVS 852
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|585102598|gb|EWM22171.1| (atp-binding cassette superfamily [Nannochloropsis gaditana]) HSP 1 Score: 259.225 bits (661), Expect = 6.837e-69 Identity = 203/686 (29.59%), Postives = 304/686 (44.31%), Query Frame = 0
Query: 3 TPSLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLL--------------PLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEF-----LFRARYTPSVPDSSP--------------------PISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRW 649
T L G VTYN +A S F LP + V +D + LTV+ET+ FA C+ PLP+ LA L + S S+ + + PSS S R + +R +VE L +L L+ C+HT VG+ + RGISGGE++RL+ E G V D IS GLDSA+T DI + L R L+ V+ LLQP PEV LFD V+++ G +V+QG + +FE LGF RPL VADF++ TS G++ + A P PPT+TE F AF + + + +L P PS P W +R FS W S L L R + RD L R +Q LL+G + G +++Q+ + V L+ +++ + A++P+ + R +FYKQR+AG+F A++A L+ +P+ V++++F + YF + + GA T++L + + FR + +L PSL + + F++FSG + +P + W+ W +P+ + +ALA NEF Y P VP + P +S G L G W G L L V + +T LAMR +RW
Sbjct: 261 TSVLKGRVTYNGDTA--------ESHRFSLPKVVAFVSQDDCHASTLTVQETVQFAYDCMNGPQAKIGLPSRLRNPLPSHRELAKH---LLQEQEAASSSSAPSASICAPSSTLGSE--------------RYGANKRN---GKVEQTLRVLGLSRCQHTIVGNTLCRGISGGEKKRLTTAEMTGGQVNVLLMDSISTGLDSAATFDICKTLSGCTRALQANIVVCLLQPPPEVFDLFDDVILMDAGHIVYQGPRELILDHFE-NLGFRRPLRKDVADFLVEVTTSA------------GAEFIIPAAQRYAAGIPD------PPTSTEEFVRAFQETEIYEHMIDNLERP-PSFAP-WLRRQRCEFS-NGWFRSTWLCLQRQARITLRDRVFLRGRIMQVLLMGAMAGTLFYQLDAHDWSDKV-CMLFFSLMFITLGNLATIPTVMEQRAVFYKQRDAGFFPTSSAVVAQMLVQIPIQFVETMVFTSLAYFLSALSR-------------ADYGAFYLTYVLVAFSTALGIGQIFRLVVHLVPSLAQAQPICSLFVLLFVVFSGLTIKGEDIPFYWTWLYWINPLAWGLRALAVNEFSSPTYSQHIIYPPPVPRAIPCDPRRPEALLQYTGSNGPFQCLSEGEIYLINLGFKTKRDWIVYGVLFLLALWSVMLMLTMLAMRLIRW 882 HSP 2 Score: 72.0182 bits (175), Expect = 3.971e-9 Identity = 84/361 (23.27%), Postives = 149/361 (41.27%), Query Frame = 0
Query: 133 VEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLRE-GRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSL-----PPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTV--FGALYQTILTVAFQTAAS-LPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGF 484
VE +L+LL L+ +G+ G+ GER+R+++G L+ + +V DE + GLD+A +++R ++ A R+ + ++ QP+ + +FD +L+LR GR V+ G PLG D + P + TG + L + P+A P A E + LA + + + SLS P S P ++ P Q L + + + R + F R S+L+ + G ++ V G +Y + V S +P R FY+++ + ++ F ++ L+ LP + V + LF V Y+ G
Sbjct: 1093 VEDMLALLELSGIADRVIGEDAGSGLLMGERKRVTIGVELVANPSVLFLDEPTTGLDAAKAFEVMRSVKKIAASGRSV-LCTIHQPSCAIFEMFDMLLLLRHGGRTVYFG-----------------PLGKRSKDLINYLEAVPGVIPLRTGGVNPANWMLECIGAGIEPAAQPLDFA-------EYYRDHALARRN-EEICDSLSRPFDSHGHGLEPIAFDSRYAAPLKVQ-----LRACMAKAIKNYWRSPNYNFTRMFISVLVAVVFGSVFHDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLVELPYIFVSTGLFINVFYWFIGL 1422
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|566028496|gb|ETI51407.1| (hypothetical protein F443_05227, partial [Phytophthora parasitica P1569]) HSP 1 Score: 252.677 bits (644), Expect = 7.128e-69 Identity = 194/662 (29.31%), Postives = 297/662 (44.86%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSP-SPSLPPSWTPH-ERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPD----SSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRD 660
+L G VTYN T A HLP V D LTV+ETL FA AC L+ D +P ++L A RA H ++++ L L +C++T VGDA+ RG+SGGER+R++ GE G+ V DEIS GLDSA+T DI+ R+ A+ R T V+SLLQP+PEV LFD V++L EG +++ G + GYFE LGF P VADF+L G K+ + AP P T+ F AF SS L L SP P L H +P Q + S LL+ R + RD++ L R + + ++G + +++Q+ V G ++ ++L ++ +A +P+ + AR +FYKQR A +F +L+S+ LP ++++S++FG +VY+ GF +GA + F+L L A AFF L P+ V ++ V FF+LF GF++ + +P WI W +PI + +ALA N++ T D S +VG L + W + G + ++ ++++A+ R+ P NV + +
Sbjct: 141 TLEGEVTYNGTPANEMQK--------HLPQFVSYVTQRDKHYSLLTVKETLEFAHAC-----CGGGLSKRDEQHFTNGTPEENKAAL-------------------------------DAARAMFKHYPDIVIQQLGLDNCQNTIVGDAMTRGVSGGERKRVTTGEMEFGNKYVMMMDEISTGLDSAATFDIITTQRSIAKKFRKTVVISLLQPSPEVFELFDDVVILNEGHVMYHGPRAEALGYFE-SLGFKCPPRRDVADFLLDL-----------GTSKQVQYEVQVAPGVCIPR------------TSSEFADAFTRSSIHHQLLVDLESPVHPGLVHDKELHMNAQPEFHQNFWDSTALLMKRQMRVTLRDSAALVGRLVMNTIMGLLYSSVFYQVN-PTNAQLVMGVIFASVLCLSLGQSAQIPTVMAAREVFYKQRGANFFRTASYVLSSSASQLPPILLESIVFGSIVYWMCGF--------------VDTIGAFI-LFILMLCITNLAFTAFFFFLASAAPNFNVANPISSVSILFFILFGGFVITKEQIPDYLIWIYWINPIAWCVRALAVNQYSDSTFDTCVYGDVNFCESFNQTVGDYSLSTFEVPSEKFWLWYGIVFMAAAYIFFMFLSYIALEFHRYESPENVTLDSE 718
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|570332201|gb|ETO80149.1| (hypothetical protein F444_05274, partial [Phytophthora parasitica P1976]) HSP 1 Score: 249.98 bits (637), Expect = 8.595e-68 Identity = 190/674 (28.19%), Postives = 305/674 (45.25%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPS--LPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPD-----SSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDEGEGKVGWEMG 671
++ G VTYN +SS S LP V D P LTV+ETL FA AC L + D +P +L A RA H ++++ L L +C++T VGDA+ RG+SGGER+R++ GE G+ V DEIS GLDSA+T DI+ R+ A+ R T V+SLLQP+PEV LFD V++L EGR+++ G + YFE LGF P VADF+L G K+ + S PS S P T +E + F S + L P PS L + P ++ S ++ R L +RDT+ L R + +L+G + ++Q + V G ++ ++ VA A +P++I AR +FYKQR + +F +L++++ +P+ ++S +FG ++Y+ G+ + A+L F L L A A+F L+ P L V ++ V F+LF+GF + + +P F W+ W +P+ + +ALA N++ +++ V + +S +++G L + W + G V+++ M+++A+ R+ P NV + E +G + G
Sbjct: 142 TVEGEVTYN--------GMSSDSLSNRLPQFVSYVNQRDKHYPSLTVKETLEFAHAC-----CGGGLPARDEQHFVNGTPEENKVAL-------------------------------DAARAMFKHYPDIVIQQLGLDNCQNTIVGDAMTRGVSGGERKRVTTGEMEFGNKYVMLMDEISTGLDSAATFDIITTQRSIAKKFRKTIVISLLQPSPEVFDLFDDVVILNEGRVMYHGPRADALSYFE-NLGFKCPPRRDVADFLLDL-----------GTDKQSQYEVSSIPS-----------GSIPRTASE-YADVFTRSRIYSRMMDDLHGPIPSNLLEDNEKQFAAVPEFHLGFVESTKDVVQRQLKLLSRDTAFLMGRAVMVILMGLLYASTFYQFD-ETNSQLVMGIIFNAVMFVALGQQAQIPTFIAAREVFYKQRRSNFFRTASFVLSNSVSQIPVAAIESAVFGSIIYWMCGY--------------VSTIEAYL-VFELMLFVTNLAFTAWFFFLSCASPDLNVANPLSMVSVLLFVLFAGFTITKDQIPDYFIWLYWLNPMSWGVRALAVNQYS-DSKFDVCVFEGVDYCASFNMTMGEYSLTTFEVPTEKFWLWYGIVFMAAAYVLFMFMSYMALEFHRFEGPENVTLD-SENKGNATDDYG 729
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|567965816|gb|ETK91284.1| (hypothetical protein L915_05097, partial [Phytophthora parasitica]) HSP 1 Score: 247.284 bits (630), Expect = 2.871e-67 Identity = 189/674 (28.04%), Postives = 304/674 (45.10%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPS--LPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPD-----SSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDEGEGKVGWEMG 671
++ G VTYN +SS S LP V D P LTV+ETL FA AC L + D +P +L A RA H ++++ L L +C++T VGDA+ RG+SGGER+R++ GE G+ V DEIS GLDSA+T DI+ R+ A+ R T V+SLLQP+PEV LFD V++L EGR+++ G + YFE LGF P VADF+L G K+ + S PS S P T +E + F S + L P PS L + P ++ S ++ R L +RDT+ L R + + +G + ++Q + V G ++ ++ VA A +P++I AR +FYKQR + +F +L++++ +P+ ++S +FG ++Y+ G+ + A+L F L L A A+F L+ P L V ++ V F+LF+GF + + +P F W+ W +P+ + +ALA N++ +++ V + +S +++G L + W + G V+++ M+++A+ R+ P NV + E +G + G
Sbjct: 142 TVEGEVTYN--------GMSSDSLSNRLPQFVSYVNQRDKHYPSLTVKETLEFAHAC-----CGGGLPARDEQHFVNGTPEENKVAL-------------------------------DAARAMFKHYPDIVIQQLGLDNCQNTIVGDAMTRGVSGGERKRVTTGEMEFGNKYVMMMDEISTGLDSAATFDIITTQRSIAKKFRKTIVISLLQPSPEVFDLFDDVVILNEGRVMYHGPRADALSYFE-NLGFKCPPRRDVADFLLDL-----------GTDKQSQYEVSSIPS-----------GSIPRTASE-YADVFTRSRIYSRMMDDLHGPIPSNLLEDNEKQFAAVPEFHLGFVESTKDVVQRQLKLLSRDTAFLMGRAVMVIFMGLLYASTFYQFD-ETNSQLVMGIIFNAVMFVALGQQAQIPTFIAAREVFYKQRRSNFFRTASFVLSNSVSQIPVAAIESAVFGSIIYWMCGY--------------VSTIEAYL-VFELMLFVTNLAFTAWFFFLSCASPDLNVANPLSMVSVLLFVLFAGFTITKDQIPDYFIWLYWLNPMSWGVRALAVNQYS-DSKFDVCVFEGVDYCASFNMTMGEYSLTTFEVPTEKFWLWYGIVFMAAAYVLFMFMSYMALEFHRFEGPENVTLD-SENKGNATDDYG 729
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|301111151|ref|XP_002904655.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262095972|gb|EEY54024.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 253.447 bits (646), Expect = 4.098e-67 Identity = 193/663 (29.11%), Postives = 298/663 (44.95%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSP-SPSLPPSWTPH-ERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPD----SSPPISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDE 661
++ G VTYN T A HLP V D LTV+ETL FA AC L+ D + ++L A RA H ++++ L L +C++T VGDA+ RG+SGGER+R++ GE G+ V+ DEIS GLDSA+T DI+ R+ A+ R T V+SLLQP+PEV LFD V++L EG +++ G + GYFE LGF P VADF+L G K+ + AP + P T+ F AF SS L L SP P L H +P + S LL+ R + RD++ L R L + ++G + +++Q V G ++ ++L ++ +A +P+ + AR +FYKQR A +F +L+S+ LP ++++S++FG +VY+ GF +GA + FL+ L A AFF L P+ +V ++ V FF+LF GF++ + +P WI W +PI + +ALA N++ T D + +VG L + W + G V ++ +++LA+ R+ P NV + ++
Sbjct: 141 TVDGQVTYNGTPANDMQK--------HLPQFVSYVTQRDKHYSLLTVKETLQFAHAC-----CGGGLSKRDEQHFANGTLEENKAAL-------------------------------DAARAMFKHYPDIVIQQLGLDNCQNTIVGDAMTRGVSGGERKRVTTGEMEFGNKYVSLMDEISTGLDSAATFDIITTQRSIAKKFRKTVVISLLQPSPEVFDLFDDVVILNEGHVMYHGPRAEALGYFE-SLGFKCPPRRDVADFLLDL-----------GTSKQSQYEVQVAPGVSIPR------------TSSDFADAFRRSSIYHQLLVDLESPVHPGLVHDKELHMNAQPEFHLNFWDSTALLMKRQMRVTLRDSAALVGRLLMNTIMGLLYSSVFYQFD-PTNAQLVMGVIFASVLCLSLGQSAQIPTVMAARDVFYKQRGANFFRTASYVLSSSASQLPPILLESIVFGSIVYWMCGF--------------VDTIGAFI-LFLIMLSITNLACTAFFFFLGSAAPNFSVANPISSVSILFFILFGGFVITKDQIPDYLIWIYWMNPIAWCVRALAVNQYRDSTFDTCVYGDINFCENFNQTVGDYSLSTFEVPTQKFWLWYGIVFMAAAYVFFMFLSYLALEFHRYESPENVTLDSED 719 HSP 2 Score: 92.8189 bits (229), Expect = 1.656e-15 Identity = 144/555 (25.95%), Postives = 219/555 (39.46%), Query Frame = 0
Query: 126 RAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVL-REGRLVFQGA----PSAVSGYFEFELGFSR-PLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSL-----SSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFP--STVFGALYQTILTVAFQTAAS----LPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFF-RALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEF----------LFRARYTPSVPDSSPP-ISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWRE 651
+F V L LL+L + D + RG S + +RL++G L +V DE ++GLD+ S I+ +R A RT V ++ QP+ EV ++FD +L+L R G VF G + YFE G +R A ++L + + V + G + F F AS H L S+L + PSP P T ++R +E + L+ R F L+ R S RF SL+LG + G Y ++ ++ G +Y L V F S LP R +FY++R A + F S++ +P + LLF Y GF G G L TF L +++ + A+ L +L PS+ V + +L LLF GF P +P + W+ P Y A++T F +VP S P ++V + + S WR AI L V + +T LAMR V ++
Sbjct: 873 NSFKYDSVNECLELLDLHP-----IADQIIRGSSVEQMKRLTIGVELAAQPSVLFLDEPTSGLDARSAKLIMDGVRKVANTGRTV-VCTIHQPSTEVFSVFDSLLLLKRGGETVFAGELGKNACEMIAYFESINGVTRLEENYNPATWMLEVI--GAGVGNSNGDKTD-------------------------------FVKVFQASKHFDFLQSNLDRDGVTRPSPDFPE-LTYSDKRAATEATQMK---FLMQRFFNLYWRTASFNLTRFFVSLVLGLVFGVTYVGAEYTSYSGINSGMGMMY---LAVGFLGIGSFNSALPVASQERAVFYRERAAQTYNAFWYFFGSSVAEIPYTFLAVLLFMATFYPMVGFT---------------GFGDFL-TFWLT-VSLQVLLQAYIGEFLVFLLPSVEVAQILGMLLALICLLFMGFSPPAGDLPTGYKWLYHITPQKYTMAAMSTIVFGNCPSDGDGSEVGCEQMTNVPPSLPSGLTVKDYLEDVFLMKHSQIWR--NCAIVLAFLVFFRVLTLLAMRFVNHQK 1362
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|301112032|ref|XP_002905095.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262095425|gb|EEY53477.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 253.062 bits (645), Expect = 5.606e-67 Identity = 186/664 (28.01%), Postives = 306/664 (46.08%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPS--LPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSP-----PISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVYVGMTWLAMRNVRWREPVNVVMGRDE 661
++ G VTYN LP L V D P LTV+ETL FA +FA + +L S+ ++++ S A H ++++ L L +C+ T VGD ++RG+SGGER+R++ GE G V DEIS GLDSA+T DI+ R+ A + T V++LLQPAPEV LFD VL+L EG +++ G V GYF +GF+RP G +AD++L T Q ++ +LP ++ P LP+ F S F S Q + L P L + P +Q++ + L+ R +L R+T+ L R + +++G I ++ + K + G L+Q+IL +A A+ +P+++ AR +FYKQR A ++ +L+ ++ LPL +SL+FG +VY+ GF AE H F++ LI A A+F +T L + V+ +A + FF++F+GF++ + +P F WI W DPI + +A+A N++ + + V D + +++G + + W GA + V++G+ + + R+ P +V++ + E
Sbjct: 135 TVKGVVTYNGEQQETLSK--------RLPQLVSYVPQRDKHFPLLTVKETLEFA---------------HEFAG------KKVIHQGEKRLTNGSAEENATALDVS---------------EALFEHYPDVVIRQLGLDNCQDTIVGDVMHRGVSGGERKRVTTGEMEFGTKTVVFMDEISTGLDSAATFDIINTQRSVATKMNKTVVIALLQPAPEVFDLFDDVLILNEGDVMYHGPREEVEGYFA-SMGFARPPGRDLADYLL---------DLGTNQQRQYQQSLPVGVNNFPL-----LPSEFG--------SIFRQSRIHQDMLRKLEEPHKHELLSHKVEDMDSVPEYQQSFWGNTASLMRRQVMLTMRNTAFLRGRAIIIVVMGLINASTFWDVDPKNV-QVMLGVLFQSILFLALGQASQIPTFMAARDIFYKQRGANFYRSSAYVLSCSVAQLPLAAGESLVFGTLVYWLCGFVSSAE---------------HFIIFMILLILTNMAFAAWFFFVTALARDIHVSKPIAMISIVFFIVFAGFVVSKDQIPDYFIWIYWIDPISWCLRAMAVNQYR-SSSFDVCVYDGTDYCAQFGMNMGEYYMSLFDVSSEKYWIVCGAIFMVAAYTVFMGLGFFVLEYKRYESPEHVMISKKE 714
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|570940390|gb|ETP05647.1| (hypothetical protein F441_17783 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 252.677 bits (644), Expect = 7.400e-67 Identity = 188/665 (28.27%), Postives = 313/665 (47.07%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPP-----ISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVY---VGMTWLAMRNVRWREPVNVVMGRDE 661
++ G VTYN +LS LP L V D P LTV+ETL FA +FA KL+ S+ ++ L + +A S H ++++ L L +C+ T VGD ++RG+SGGER+R++ GE G V DEIS GLDSA+T DI+ + R+ A L T V++LLQPAPEV LFD VL+L EG +++ G V YF +GF RP G +AD++L T Q ++ +LP ++ P P + F + + + H Q L + + S+P F + W + L+ R +L R+T+ L R + +++G I ++ + K + G L+Q+IL +A A+ +P+++ AR +FYKQR A ++ +L+ ++ LP +SL+FG ++Y+ GF AE H F++ LI A A+F +T + + V+ +A + FF++F+GF++ + +P F WI W DPI + +A+A N++ A + V + + +++G + LF + ++ A +F+ V Y +G+ ++A+ R+ P +VV+ + E
Sbjct: 133 TVEGAVTYN---GELLENLSK-----RLPQLVSYVPQRDKHFPLLTVKETLEFA---------------HEFAG--------------KKLIHEGE---QRLTKGSVEENMNAL----NVSKALSDHYPDVVIRQLGLENCQDTIVGDVMHRGVSGGERKRVTTGEMEFGTKTVVLMDEISTGLDSAATFDIINMQRSVATKLNKTVVIALLQPAPEVFDLFDDVLILNEGEVMYHGPREEVESYFA-SMGFVRPPGRDLADYLL---------DLGTKQQRQYQQSLPVGVTTFPL-IPSEFGSIFRQSRVHQNMLRKMEAPHRQELLDTKAEDMDSVP---------EFQQSFW-ENTATLMRRQAMLTVRNTAFLRGRAIIIIVMGLINASTFWDVDPKNV-QVMLGVLFQSILFLALGQASQIPTFMAARDIFYKQRGANFYRSSAYVLSCSVAQLPFAAGESLVFGTLIYWLCGFVSSAE---------------HFVIFMVLLILTNMAFAAWFFFVTAIARDIHVSKPIAMISIVFFIVFAGFVVSKDQIPDYFIWIYWIDPISWCLRAMAVNQYR-SATFDVCVYEGTDYCAQFGMNMGEYYM---SLFEVSSEKYWIACGAIFMVVAYTAFMGLGFIALEYKRYESPEHVVLSKKE 712
BLAST of EWM21399.1 vs. NCBI_GenBank
Match: gi|675175101|ref|XP_008896435.1| (hypothetical protein PPTG_04299 [Phytophthora parasitica INRA-310] >gi|568104157|gb|ETN18814.1| hypothetical protein PPTG_04299 [Phytophthora parasitica INRA-310]) HSP 1 Score: 252.677 bits (644), Expect = 7.610e-67 Identity = 188/665 (28.27%), Postives = 313/665 (47.07%), Query Frame = 0
Query: 5 SLTGHVTYNHTSATPFPSLSSSSPPFHLPALTCLVGAEDVLSPFLTVEETLLFAGACLLPLPTSAYLASSDFAALCQASPPSLPSSLATKLLPPSSLPSSSSPPPSLPPSLGRLLRRPSARRAFSAHRVEMILSLLNLTSCRHTRVGDAVNRGISGGERRRLSLGEALMGDHAVTCFDEISNGLDSASTLDIVRVLRAWARHLRTTSVMSLLQPAPEVVALFDHVLVLREGRLVFQGAPSAVSGYFEFELGFSRPLGMGVADFVLACLTSPSKVSFATGQPKEGSDTLPSAPSSAPPSAPPSLPASFPPTTTEAFESAFLASSHGQSLASSLSSPSPSLPPSWTPHERRPFSEQAWLPSLLLLLHRDFLLHARDTSLLFARFLQSLLLGFITGFIYFQIGVKAFPSTVFGALYQTILTVAFQTAASLPSYINARPLFYKQREAGYFACFPALLASTLIGLPLVVVDSLLFGIVVYFGTGFNEGAEGRGGGGGDGAGGVGAHLGTFLLNLIAIGWAMMAFFRALTYLCPSLTVTAAVAGVLTFFFLLFSGFILPRPSMPGAFAWIMWTDPIFYAYQALATNEFLFRARYTPSVPDSSPP-----ISVGHAILKQRGLFLSPAWRFKGAAINLFLCVVY---VGMTWLAMRNVRWREPVNVVMGRDE 661
++ G VTYN +LS LP L V D P LTV+ETL FA +FA KL+ S+ ++ L + +A S H ++++ L L +C+ T VGD ++RG+SGGER+R++ GE G V DEIS GLDSA+T DI+ + R+ A L T V++LLQPAPEV LFD VL+L EG +++ G V YF +GF RP G +AD++L T Q ++ +LP ++ P P + F + + + H Q L + + S+P F + W + L+ R +L R+T+ L R + +++G I ++ + K + G L+Q+IL +A A+ +P+++ AR +FYKQR A ++ +L+ ++ LP +SL+FG ++Y+ GF AE H F++ LI A A+F +T + + V+ +A + FF++F+GF++ + +P F WI W DPI + +A+A N++ A + V + + +++G + LF + ++ A +F+ V Y +G+ ++A+ R+ P +VV+ + E
Sbjct: 133 TVEGAVTYN---GELLENLSK-----RLPQLVSYVPQRDKHFPLLTVKETLEFA---------------HEFAG--------------KKLIHEGE---QRLTKGSVEENMNAL----NVSKALSDHYPDVVIRQLGLENCQDTIVGDVMHRGVSGGERKRVTTGEMEFGTKTVVLMDEISTGLDSAATFDIINMQRSVATKLNKTVVIALLQPAPEVFDLFDDVLILNEGEVMYHGPREEVESYFA-SMGFVRPPGRDLADYLL---------DLGTKQQRQYQQSLPVGVTTFPL-IPSEFGSIFRQSRVHQNMLRKMEAPHRQELLDTKAEDMDSVP---------EFQQSFW-ENTATLMRRQAMLTVRNTAFLRGRAIIIIVMGLINASTFWDVDPKNV-QVMLGVLFQSILFLALGQASQIPTFMAARDIFYKQRGANFYRSSAYVLSCSVAQLPFAAGESLVFGTLIYWLCGFVSSAE---------------HFVIFMVLLILTNMAFAAWFFFVTAIARDIHVSKPIAMISIVFFIVFAGFVVSKDQIPDYFIWIYWIDPISWCLRAMAVNQYR-SATFDVCVYEGTDYCAQFGMNMGEYYM---SLFEVSSEKYWIACGAIFMVVAYTAFMGLGFIALEYKRYESPEHVVLSKKE 712 The following BLAST results are available for this feature:
BLAST of EWM21399.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|