EWM21402.1, cds9273 (CDS) Nannochloropsis gaditana

Overview
NameEWM21402.1
Unique Namecds9273
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:334941..335447 -
Alignment locationKK037252.1:333171..334742 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21402.1
Productabc transporter g family member 39
Orig transcript idgnl|cribi|Naga_100300g1.3769.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:334941..335447 -
KK037252.1supercontigKK037252.1:333171..334742 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR013525ABC_2_trans
IPR003593AAA+_ATPase
Homology
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|585101623|gb|EWM21402.1| (abc transporter g family member 39 [Nannochloropsis gaditana])

HSP 1 Score: 1403.27 bits (3631), Expect = 0.000e+0
Identity = 692/692 (100.00%), Postives = 692/692 (100.00%), Query Frame = 0
Query:    1 MEEGREEAKEGRVTQEAASQTRTSPTRSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPGSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGPAQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQWWTEGGGEEGGEATIVVFNPATRTFEKASKWGVIQWFFGGKDEGGGIFRFSFVHRWRNLCLMVVFILACNVLLMAALQWRRFERR 692
            MEEGREEAKEGRVTQEAASQTRTSPTRSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPGSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGPAQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQWWTEGGGEEGGEATIVVFNPATRTFEKASKWGVIQWFFGGKDEGGGIFRFSFVHRWRNLCLMVVFILACNVLLMAALQWRRFERR
Sbjct:    1 MEEGREEAKEGRVTQEAASQTRTSPTRSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPGSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGPAQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQWWTEGGGEEGGEATIVVFNPATRTFEKASKWGVIQWFFGGKDEGGGIFRFSFVHRWRNLCLMVVFILACNVLLMAALQWRRFERR 692          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|585102598|gb|EWM22171.1| (atp-binding cassette superfamily [Nannochloropsis gaditana])

HSP 1 Score: 313.923 bits (803), Expect = 1.284e-88
Identity = 216/645 (33.49%), Postives = 330/645 (51.16%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPV--LTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPP-GSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP--AQGKDGVVAYLDSIPGVPPVEA-GENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAW-RVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQWWTEGGGEEGGEATIVVFNPATRTFEKASKWGVIQWFFGGKDEGGGIFRFSFVHRWRNLCLMVVFI 673
            L+  + G   PG + AL+G+SG+GKTTLLDVLAGRKT  G + G IL+NG   P   R    +  YV+Q  ++VHSP+ T  E L FSA LRLP     +  A     V  +L+LL +  I   ++G   GSGL   E KRV+I  E+VA PS+LFLDEPTT LDA  +F V+R ++ +A             G S++ +IHQPS  +F  FD LL+L  GG+ VY GP   + KD ++ YL+++PGV P+   G NPA+W+L C+             AG      P+DF  +Y   A           A+R  +  ++ + P    G G                      P A           QL  C  +A    WR P+Y ++R+  +  +A+V   ++H +P +T  D+VG +GL++LS +F   +N  +V+ +M +ER AFYRE+ +  Y V AY +S+ LVE+PY+ V + LF+   Y+ +G +   + +  ++W F  LY++     GQ L  L P+ QTAQ    +IA I ++  G    P  +   W  ++ L P +   EG+VM+Q+  EG          +   PA +          I   FGG+        F++  +W+++ +++++I
Sbjct:  992 LVKGVTGYARPGSLTALMGSSGAGKTTLLDVLAGRKTT-GCIIGEILVNG--FPKEQRAFSRVMGYVEQ--TDVHSPHSTVREALLFSATLRLPYT--QVTAAQREVFVEDMLALLELSGIADRVIGEDAGSGLLMGERKRVTIGVELVANPSVLFLDEPTTGLDAAKAFEVMRSVKKIA-----------ASGRSVLCTIHQPSCAIFEMFDMLLLLRHGGRTVYFGPLGKRSKD-LINYLEAVPGVIPLRTGGVNPANWMLECI------------GAGIEPAAQPLDFAEYYRDHAL----------ARRNEEICDSLSRPFDSHGHG--------------------LEPIAFDSRYAAPLKVQLRACMAKAIKNYWRSPNYNFTRMFISVLVAVVFGSVFHDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLVELPYIFVSTGLFINVFYWFIGLAAEPFSKFVYYWVFFALYIVCLVFIGQFLICLLPNQQTAQVAGASIAAIMNLFGGYLCTPRTITPFWKFVYYLVPSHYMLEGLVMSQF--EGDSTPVQPIYGLQATPADQ---------YIYDHFGGE--------FTYGAKWKDIGVLLLYI 1556          

HSP 2 Score: 88.1965 bits (217), Expect = 3.427e-14
Identity = 143/640 (22.34%), Postives = 250/640 (39.06%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGR--KTGHGRMTGSILLNGRALPPAL--RPVLTAYVDQNSSEVHSPYMTPWEILRFS-AALRLPRACPALPPALYPDL-----------------------------------------------VHAILSLLRMQRIKHSIVGPP-GSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGPAQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLH-------VCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYML--FATAFG-----QALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            +L D+ G + PGR+  L+G  GSGK++ L  LAGR  +T    + G +  NG          P + A+V Q+  + H+  +T  E ++F+   +  P+A   LP  L   L                                               V   L +L + R +H+IVG     G+S  E KR++ A       ++L +D  +T LD+  +F + + L    R  +           +IV  + QP  E+F  FD ++++   G +VY GP   ++ ++ + +++    P+   ++ A +++                  T    A    P     +A          E  RA+Q +E   E + D     L R                  PP+  P L    C   +       +C +R      R   +   RI     M  +   +++   Q    D    + ++F SL F    N   +  +M Q R  FY++R AG +   +  ++ +LV++P   V++++F    YF    S A +      AF   Y+L  F+TA G     + +  L PS   AQ + +    +F + SG+T    D+P  W  L+ + PL      + + ++
Sbjct:  221 ILKDLRGVLLPGRLTLLLGPPGSGKSSFLKALAGRVKRTRTSVLKGRVTYNGDTAESHRFSLPKVVAFVSQD--DCHASTLTVQETVQFAYDCMNGPQAKIGLPSRLRNPLPSHRELAKHLLQEQEAASSSSAPSASICAPSSTLGSERYGANKRNGKVEQTLRVLGLSRCQHTIVGNTLCRGISGGEKKRLTTAEMTGGQVNVLLMDSISTGLDSAATFDICKTLSGCTRALQA----------NIVVCLLQPPPEVFDLFDDVILMD-AGHIVYQGP---RELILDHFENLGFRRPLR--KDVADFLVEV----------------TTSAGAEFIIPAAQRYAAGIPDPPTSTEEFVRAFQETEI-YEHMIDN----LER------------------PPSFAPWLRRQRCEFSNGWFRSTWLCLQRQARITLRDRVFLRGRIMQVLLMGAMAGTLFY---QLDAHDWSDKVCMLFFSLMFITLGNLATIPTVMEQ-RAVFYKQRDAGFFPTSSAVVAQMLVQIPIQFVETMVFTSLAYFLSALSRADY-----GAFYLTYVLVAFSTALGIGQIFRLVVHLVPSLAQAQPICSLFVLLFVVFSGLTIKGEDIPFYWTWLYWINPLAWGLRALAVNEF 794          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|553189606|ref|XP_005855037.1| (atp-binding cassette superfamily [Nannochloropsis gaditana CCMP526] >gi|422294022|gb|EKU21322.1| atp-binding cassette superfamily [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 300.827 bits (769), Expect = 2.849e-86
Identity = 207/595 (34.79%), Postives = 308/595 (51.76%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPV--LTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVG-PPGSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLV-IRMLR-ILARGREG-------------GREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP--AQGKDGVVAYLDSIPGVPPVEA-GENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAW-RVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            L+  + G   PG + AL+G+SG+GKTTLLDVLAGRKT  G + G IL+NG   P   R    +  YV+Q  ++VHSP+ T  E L FSA LRLP     +  A     V  +L+LL +  I   ++G   GSGL   E KRV+I  E+VA PS+LFLDEPTT LDA  +F V IR  +  + RG +                ++    G S++ +IHQPS  +F  FD LL+L  GG+ VY GP   + KD ++ YL+++PGV P+   G NPA+W+L C+             AG      P+DF  +Y   A           A+R  +  ++ + P    G G                      P A           QL  C  +A    WR P+Y ++R+  +  +A+V   ++H +P +T  D+VG +GL++LS +F   +N  +V+ +M +ER AFYRE+ +  Y V AY +S+ LVE+PY+ V + LF+   Y+ +G +   + +  ++W F  LY++     GQ L  L P+ QTAQ    +IA I ++  G    P  +   W  ++ L P +   EG+VM+Q+
Sbjct:  357 LVKGVTGYARPGSLTALMGSSGAGKTTLLDVLAGRKT-TGCIIGEILVNG--FPKEQRAFSRVMGYVEQ--TDVHSPHSTVREALLFSATLRLPYT--QVTAAQREVFVEDMLALLELSGIADRVIGEDAGSGLLMGERKRVTIGVELVANPSVLFLDEPTTGLDAAKAFEVGIRSEQPNIFRGDQSEVSAFVSSMSVMRSVKKIAASGRSVLCTIHQPSCAIFEMFDMLLLLRHGGRTVYFGPLGKRSKD-LINYLEAVPGVIPLRTGGVNPANWMLECI------------GAGIEPAAQPLDFAEYYRDHAL----------ARRNEEICDSLSRPFDSHGHG--------------------LEPIAFDSRYAAPLKVQLRACMAKAIKNYWRSPNYNFTRMFISVLVAVVFGSVFHDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLVELPYIFVSTGLFINVFYWFIGLAAEPFSKFVYYWVFFALYIVCLVFIGQFLICLLPNQQTAQVAGASIAAIMNLFGGYLCTPRTITPFWKFVYYLVPSHYMLEGLVMSQF 901          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|553195811|ref|XP_005856212.1| (hypothetical protein NGA_2038100, partial [Nannochloropsis gaditana CCMP526] >gi|422292846|gb|EKU20148.1| hypothetical protein NGA_2038100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 272.707 bits (696), Expect = 5.677e-85
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query:  423 TAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTA 559
            TAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTA
Sbjct:    1 TAAMALVLSGIYHGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTA 137          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|743798799|ref|XP_011011592.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Populus euphratica])

HSP 1 Score: 296.975 bits (759), Expect = 6.198e-83
Identity = 191/586 (32.59%), Postives = 302/586 (51.54%), Query Frame = 0
Query:   27 RSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIY--HGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            R  P K   LL+DI G   PG + AL+G SG+GKTTLLDVL+GRKTG G + G I + G          ++ Y +Q  +++HSP +T  E + +SA LRLP   P +      + ++ +L  + +  IK S+VG PG SGLS E+ KR+++A E+VA PS++F+DEPT+ LDA  + +V+R+++ +A   E GR        +IV +IHQPS ++F  FD L+++  GG+++Y GP  Q    V+ Y ++IPGVP ++   NPA+W+L               ++ T + D  +DF   Y  SA ++  +  V++      GS+    P                          TCFP         +   QL  C  +   + WR PSY   RI   +  AL+   ++   G       DL    G ++  + F    N + VL  + +ER  FYRERFAG Y   AY+ + +LVEVPY+ ++ +L+++  Y  +G+S +A+++ W +  +F  +LF    G  L +LTP+ Q A  L        +  SG       +P+ W+ L+ +CP +     M+ +Q+
Sbjct:  873 RGFPQKKLQLLSDITGAFRPGILTALMGVSGAGKTTLLDVLSGRKTG-GTIEGEIRIGGYPKVQDSFARVSGYCEQ--TDIHSPQITVEESVIYSAWLRLP---PEIDTKTKYEFINQVLETIELDEIKDSLVGIPGISGLSIEQRKRLTVAVELVANPSIIFMDEPTSGLDARAAAIVMRVVKNIA---ETGR--------TIVCTIHQPSIDIFEAFDELILMKIGGRIIYSGPLGQRSSKVIQYFENIPGVPKIKNRYNPATWMLEV-------------SSKTAEADLGVDFGEAYEGSALYEENKELVKQLSSPTPGSKDLHFP--------------------------TCFPQ--------NGWEQLKACLWKQNLSYWRSPSYNLLRIVFMSFGALLFGLLFWQQGNKINNQQDLFSIAGSMYSIIIFFGINNCSPVLPFVARERTVFYRERFAGMYSSWAYSFAQVLVEVPYLLIEGILYVIITYPMIGYSLSAYKIFWSFYSMFCMLLFFNYLGMLLVSLTPNIQVASNLAAFAYTTLNFFSGFIVPKPYIPKWWVWLYYICPSSWTLNAMLTSQY 1394          

HSP 2 Score: 92.8189 bits (229), Expect = 1.163e-15
Identity = 77/268 (28.73%), Postives = 122/268 (45.52%), Query Frame = 0
Query:   26 TRSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAAL--------------RLPRACPALPP-----------------ALYPDLVHAILSLLRMQRIKHSIVGPP-GSGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP 261
            +RS+     +++ D++G + PGRM  L+G  G GKTTLL  L+G+ +   ++TG I  NG  L   +     AYV Q   ++H P MT  E + FSA                R  +    LP                  AL  D    IL +L +     ++VG P   G+S  + KR+S    VV     LF+DE +  LD+  +F ++  ++ LA               +++ S+ QP+ E+F  FD ++++   G +VY GP
Sbjct:  178 SRSKQRTKISIIKDVSGIIKPGRMTLLLGPPGCGKTTLLKALSGKPSNSLKVTGEISYNGHRLEEFVPQKTAAYVSQ--YDLHIPEMTVRETVDFSARCQGTGSQAEILMEISRKEKQAGILPDTDLDTYMKGISEEGEKIALQTDY---ILEILGLDICADTMVGDPMRRGISGGQKKRLSTGEMVVGPMKALFMDEISNGLDSSTTFQIVSCMQHLAHITNA----------TVLISLLQPAPEIFDLFDDIMLMAE-GMVVYHGP 429          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|566191130|ref|XP_002316074.2| (hypothetical protein POPTR_0010s16350g [Populus trichocarpa] >gi|550329936|gb|EEF02245.2| hypothetical protein POPTR_0010s16350g [Populus trichocarpa])

HSP 1 Score: 295.434 bits (755), Expect = 1.529e-82
Identity = 190/586 (32.42%), Postives = 302/586 (51.54%), Query Frame = 0
Query:   27 RSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIY--HGQPQETVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            R  P K   LL+DI G   PG + AL+G SG+GKTTL+DVL+GRKTG G + G I + G          ++ Y +Q  +++HSP +T  E + +SA LRLP   P +      + V+ +L  + +  IK S+VG PG SGLS E+ KR+++A E+VA PS++F+DEPT+ LDA  + +V+R+++ +    E GR        +IV +IHQPS ++F  FD L+++  GG+++Y GP  Q    V+ Y ++IPGVP ++   NPA+W+L               ++ T + D  +DF                      A++GS    E      +  L +Q + P    +   + TCFP         +   QL  C  +   + WR PSY   RI   +  AL+   ++   G       DL    G ++  + F    N + VL  + +ER  FYRERFAG Y   AY+ + +LVEVPY+ ++ +L+++  Y  +G+S +A+++ W +  +F  +LF    G  L +LTP+ Q A  L        +  SG       +P+ W+ L+ +CP +     M+ +Q+
Sbjct:  811 RGFPQKKLQLLSDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTG-GTIEGEIRIGGYPKVQDSFARVSGYCEQ--TDIHSPQITVEESVIYSAWLRLP---PEIDTKTKYEFVNQVLETIELDEIKDSLVGIPGISGLSIEQRKRLTVAVELVANPSIIFMDEPTSGLDARAAAIVMRVVKNIV---ETGR--------TIVCTIHQPSIDIFEAFDELILMKIGGRIIYSGPLGQRSSKVIEYFENIPGVPKIKNRYNPATWMLEV-------------SSKTAEADLGVDFG--------------------EAYEGSTLYEE------NKELVKQLSSPTPGSKDLHFPTCFPQ--------NGWEQLKACLWKQHLSYWRSPSYNLLRIVFMSFGALLFGLLFWQQGNKINNQQDLFSIAGSMYSIIIFFGINNCSPVLAFVARERTVFYRERFAGMYSSWAYSFAQVLVEVPYLLIEGILYVIITYPMIGYSLSAYKIFWSFYSMFCMLLFFNYLGMLLVSLTPNIQVASNLAAFAYTTLNFFSGFIVPKPYIPKWWVWLYYICPSSWTLNAMLTSQY 1332          

HSP 2 Score: 83.9593 bits (206), Expect = 5.591e-13
Identity = 76/290 (26.21%), Postives = 127/290 (43.79%), Query Frame = 0
Query:    7 EAKEGRVTQEAASQT-RTSP-----TRSRPLKGRTLLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSA-----------ALRLPRACPALPPALYPDL-----------------VHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP 261
            E K   V  EA  +  R  P     + ++ +   +++ D++G + PGRM  L+G  G GKTTLL  L+G+ +   ++ G I  NG  L   +     AYV Q   ++H P MT  E + FSA            + + R           DL                    +L +L +     ++VG     G+S  + KR+S    VV     LF+DE +  LD+  +F ++  ++ LA   +           +++ S+ QP+ E+F  FD ++++   G +VY GP
Sbjct:  140 EVKYRNVCVEADCEVVRGKPLPTLWSTAKSILSISIIKDVSGIIKPGRMTLLLGPPGCGKTTLLKALSGKPSNSLKVAGEISYNGHRLEEFVPQKTAAYVSQ--YDLHIPEMTVRETVDFSARCQGTGSQAEILMEISRKEKQAGILQDTDLDTYMKGISEEGAKITLQTDYVLEILGLDICADTMVGDTMRRGISGGQKKRLSTGEMVVGPMKALFMDEISNGLDSSTTFQIVSCMQHLAHITDA----------TVLISLLQPAPEIFDLFDDIMLMAE-GMVVYHGP 416          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|755573298|gb|AJK30641.1| (pleiotropic drug resistance transporter, partial [Panax ginseng])

HSP 1 Score: 285.034 bits (728), Expect = 6.593e-82
Identity = 182/577 (31.54%), Postives = 301/577 (52.17%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQE--TVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            LL +I G   PG + AL+G SG+GKTTLLDVL+GRK+  G + G+I + G          ++ Y +Q  +++HSP +T  E L +SA LRLP     +  +   + V  +L ++ +  +K ++VG PG SG+S E+ KR++IA E+V+ PS++F+DEPT+ LDA  + +V+R+++ +   R            ++V +IHQPS ++F  FD L+++ RGGQ++Y G   Q    ++ Y +++PGVP ++   NPA+W+L               +A  R G   +DF   Y  S     + RR +E                      LAR+ + P    +   + TCF          +   Q   C  +   + WR P Y  +R+      +L+L  I  G+ +E  +  DL+  LG +F+ L F    N ++VL ++  ER   YRERFAG Y   AY+ + +++E+PY+ +Q+VLFL+  Y  +GF  +  RV +++  +F  ML+ T  G  L ++T S Q A  + +    + S+ SG       +PR W   + +CP   +  G++ +Q+
Sbjct:  229 LLHEITGSFRPGILTALMGVSGAGKTTLLDVLSGRKSS-GIIEGNIRIGGYPKVQDTYARISGYCEQ--TDIHSPQITIEESLTYSAWLRLP---AQIHQSKKSEFVAEVLEMIELNDVKDALVGFPGVSGISNEQRKRLTIAVELVSNPSIIFMDEPTSGLDARSAAIVMRVVKNIVNTRR-----------TVVCTIHQPSIDIFESFDELILMKRGGQIIYSGELGQHSSKLIEYFENVPGVPKIQENHNPATWMLEV----------SSSSAEARLG---LDFGQLYKESH----LCRRTKE----------------------LARELSYPPQDSKELQFSTCFSQ--------NGWEQFKACLWKHNLSYWRNPKYNLARLTFITMASLLLGAILWGKGKEINSEQDLLNILGSMFIFLQFLGISNCSSVLSIISTERTILYRERFAGMYSSWAYSFAQVIIEIPYIFLQAVLFLIITYPAIGFYWSVDRVFFYFYTMFCTMLYFTYLGMLLVSMTSSLQMASVMASFCYTMISLFSGFLIPEPRIPRWWSWCYWICPPAWSLRGLITSQY 741          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|947119625|gb|KRH67874.1| (hypothetical protein GLYMA_03G192500 [Glycine max])

HSP 1 Score: 280.026 bits (715), Expect = 2.086e-81
Identity = 185/560 (33.04%), Postives = 286/560 (51.07%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQETVP--DLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLW 591
            LL D +G   PG + AL+G SG+GKTTL+DVLAGRKTG G + GSI ++G     A    ++ Y +QN  ++HSPY+T +E L FSA LRLP    A    ++   V  ++ L+ + +I++++VG PG  GLS E+ KRV+IA E+VA PS++F+DEPT+ LDA  + +V+R +R      + GR        ++V +IHQPS ++F  FD LL++ RGGQ++Y GP       ++ Y +SI GV  ++ G NPA+W+L    P               +    IDF   Y  S    T+ +R +E  +     E +T P   +GS  L                        P     SF  Q   C  + + + WR PSY   R+  T A+ ++   I+  + +      DL   LG ++ ++ F    N+  V  ++  ER   YRER AG Y    YA+S + +E  Y   Q+ +F + +Y  +GF   A +   F+ F+ + +++ T +G  + A+TPS Q A    +    I++   G       +PR  IP+W
Sbjct:   51 LLHDASGAFRPGILTALMGVSGAGKTTLMDVLAGRKTG-GYIEGSISISGYPKNQATFARVSGYCEQN--DIHSPYVTVYESLLFSAWLRLPSDVKAQNRKMF---VEEVMELVELNQIRNALVGLPGVDGLSTEQRKRVTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR---NTVDTGR--------TVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGHHSQKLIEYFESIAGVQKIKDGYNPATWMLEVSTPSI-------------EAHLGIDFAEIYTNS----TLYQRNQELIK-----ELSTPP---QGSSDLR----------------------FPTKYSQSFFVQCKACFWKQYWSYWRNPSYNAVRLFFTIAIGIMFGLIFWNKAKNIKKQQDLFDLLGAMYAAVMFLGTSNTMGVQPIVDIERTVLYRERAAGMYSTLTYAISQVAIEAIYSATQTTIFSVIIYSMMGFEWTARKFLSFYYFMLMCLIYYTLYGMMIVAVTPSFQIAAVCNSFFLTIWNTFCGFV-----IPRTQIPIW 541          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|755573296|gb|AJK30640.1| (pleiotropic drug resistance transporter, partial [Panax ginseng])

HSP 1 Score: 286.189 bits (731), Expect = 2.269e-79
Identity = 182/577 (31.54%), Postives = 301/577 (52.17%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQE--TVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            LL +I G   PG + AL+G SG+GKTTLLDVL+GRK+  G + G+I + G          ++ Y +Q  +++HSP +T  E L +SA LRLP     +  +   + V  +L ++ +  +K ++VG PG SG+S E+ KR++IA E+V+ PS++F+DEPT+ LDA  + +V+R+++ +   R            ++V +IHQPS ++F  FD L+++ RGGQ++Y G   Q    ++ Y +++PGVP ++   NPA+W+L               +A  R G   +DF   Y  S     + RR +E                      LAR+ + P    +   + TCF          +   Q   C  +   + WR P Y  +R+      +L+L  I  G+ +E  +  DL+  LG +F+ L F    N ++VL ++  ER   YRERFAG Y   AY+ + +++E+PY+ +Q+VLFL+  Y  +GF  +  RV +++  +F  ML+ T  G  L ++T S Q A  + +    + S+ SG       +PR W   + +CP   +  G++ +Q+
Sbjct:  794 LLHEITGSFRPGILTALMGVSGAGKTTLLDVLSGRKSS-GIIEGNIRIGGYPKVQDTYARISGYCEQ--TDIHSPQITIEESLTYSAWLRLP---AQIHQSKKSEFVAEVLEMIELNDVKDALVGFPGVSGISNEQRKRLTIAVELVSNPSIIFMDEPTSGLDARSAAIVMRVVKNIVNTRR-----------TVVCTIHQPSIDIFESFDELILMKRGGQIIYSGELGQHSSKLIEYFENVPGVPKIQENHNPATWMLEV----------SSSSAEARLG---LDFGQLYKESH----LCRRTKE----------------------LARELSYPPQDSKELQFSTCFSQ--------NGWEQFKACLWKHNLSYWRNPKYNLARLTFITMASLLLGAILWGKGKEINSEQDLLNILGSMFIFLQFLGISNCSSVLSIISTERTILYRERFAGMYSSWAYSFAQVIIEIPYIFLQAVLFLIITYPAIGFYWSVDRVFFYFYTMFCTMLYFTYLGMLLVSMTSSLQMASVMASFCYTMISLFSGFLIPEPRIPRWWSWCYWICPPAWSLRGLITSQY 1306          
BLAST of EWM21402.1 vs. NCBI_GenBank
Match: gi|755573294|gb|AJK30639.1| (pleiotropic drug resistance transporter, partial [Panax ginseng])

HSP 1 Score: 286.189 bits (731), Expect = 3.065e-79
Identity = 182/577 (31.54%), Postives = 301/577 (52.17%), Query Frame = 0
Query:   36 LLTDINGCVPPGRMMALIGASGSGKTTLLDVLAGRKTGHGRMTGSILLNGRALPPALRPVLTAYVDQNSSEVHSPYMTPWEILRFSAALRLPRACPALPPALYPDLVHAILSLLRMQRIKHSIVGPPG-SGLSFEEMKRVSIAAEVVALPSLLFLDEPTTYLDAEHSFLVIRMLRILARGREGGREEGWKGGMSIVASIHQPSRELFAQFDSLLVLGRGGQLVYVGP-AQGKDGVVAYLDSIPGVPPVEAGENPASWVLRCVQPEAWLAREGPGAAGTRQGDAPIDFPGWYARSAWHDTMRRRVREAQRAWQGSETATEPLTDKGSGRLARQETDPKGRPRGATWRTCFPPALPPSLPPSFCTQLHVCTRRAWSTCWRRPSYQWSRIGGTAAMALVLSGIYHGQPQE--TVPDLVGYLGLIFLSLTFTACINSTAVLELMHQERPAFYRERFAGAYGVPAYALSWLLVEVPYVGVQSVLFLLFLYFPLGFSTAAWRVAWFWAFLFLYMLFATAFGQALAALTPSTQTAQTLFNTIAPIFSIMSGMTFMPGDVPRGWIPLWVLCPLNKAFEGMVMTQW 608
            LL +I G   PG + AL+G SG+GKTTLLDVL+GRK+  G + G+I + G          ++ Y +Q  +++HSP +T  E L +SA LRLP     +  +   + V  +L ++ +  +K ++VG PG SG+S E+ KR++IA E+V+ PS++F+DEPT+ LDA  + +V+R+++ +   R            ++V +IHQPS ++F  FD L+++ RGGQ++Y G   Q    ++ Y +++PGVP ++   NPA+W+L               +A  R G   +DF   Y  S     + RR +E                      LAR+ + P    +   + TCF          +   Q   C  +   + WR P Y  +R+      +L+L  I  G+ +E  +  DL+  LG +F+ L F    N ++VL ++  ER   YRERFAG Y   AY+ + +++E+PY+ +Q+VLFL+  Y  +GF  +  RV +++  +F  ML+ T  G  L ++T S Q A  + +    + S+ SG       +PR W   + +CP   +  G++ +Q+
Sbjct:  862 LLHEITGSFRPGILTALMGVSGAGKTTLLDVLSGRKSS-GIIEGNIRIGGYPKVQDTYARISGYCEQ--TDIHSPQITIEESLTYSAWLRLP---AQIHQSKKSEFVAEVLEMIELNDVKDALVGFPGVSGISNEQRKRLTIAVELVSNPSIIFMDEPTSGLDARSAAIVMRVVKNIVNTRR-----------TVVCTIHQPSIDIFESFDELILMKRGGQIIYSGELGQHSSKLIEYFENVPGVPKIQENHNPATWMLEV----------SSSSAEARLG---LDFGQLYKESH----LCRRTKE----------------------LARELSYPPQDSKELQFSTCFSQ--------NGWEQFKACLWKHNLSYWRNPKYNLARLTFITMASLLLGAILWGKGKEINSEQDLLNILGSMFIFLQFLGISNCSSVLSIISTERTILYRERFAGMYSSWAYSFAQVIIEIPYIFLQAVLFLIITYPAIGFYWSVDRVFFYFYTMFCTMLYFTYLGMLLVSMTSSLQMASVMASFCYTMISLFSGFLIPEPRIPRWWSWCYWICPPAWSLRGLITSQY 1374          
The following BLAST results are available for this feature:
BLAST of EWM21402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101623|gb|EWM21402.1|0.000e+0100.00abc transporter g family member 39 [Nannochloropsi... [more]
gi|585102598|gb|EWM22171.1|1.284e-8833.49atp-binding cassette superfamily [Nannochloropsis ... [more]
gi|553189606|ref|XP_005855037.1|2.849e-8634.79atp-binding cassette superfamily [Nannochloropsis ... [more]
gi|553195811|ref|XP_005856212.1|5.677e-85100.00hypothetical protein NGA_2038100, partial [Nannoch... [more]
gi|743798799|ref|XP_011011592.1|6.198e-8332.59PREDICTED: pleiotropic drug resistance protein 3-l... [more]
gi|566191130|ref|XP_002316074.2|1.529e-8232.42hypothetical protein POPTR_0010s16350g [Populus tr... [more]
gi|755573298|gb|AJK30641.1|6.593e-8231.54pleiotropic drug resistance transporter, partial [... [more]
gi|947119625|gb|KRH67874.1|2.086e-8133.04hypothetical protein GLYMA_03G192500 [Glycine max][more]
gi|755573296|gb|AJK30640.1|2.269e-7931.54pleiotropic drug resistance transporter, partial [... [more]
gi|755573294|gb|AJK30639.1|3.065e-7931.54pleiotropic drug resistance transporter, partial [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9303rna9303Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications