EWM21400.1, cds9272 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|585101621|gb|EWM21400.1| (proteasome subunit alpha type 5 [Nannochloropsis gaditana]) HSP 1 Score: 1278.85 bits (3308), Expect = 0.000e+0 Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0 Query: 1 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGMLRTGMKKKGAGDEGGGGREEGGDRREAGGGEEGAWEEEGVEADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGLAFHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKGAKARNKGAGDKRLLHLKSFCPSWTPSLLPDMFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFKSEGEGEGGQAEEKCCQGNRVERLHDKALGRKRNRIGSHKCIPAQAALVSEFGRG 628 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGMLRTGMKKKGAGDEGGGGREEGGDRREAGGGEEGAWEEEGVEADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGLAFHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKGAKARNKGAGDKRLLHLKSFCPSWTPSLLPDMFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFKSEGEGEGGQAEEKCCQGNRVERLHDKALGRKRNRIGSHKCIPAQAALVSEFGRG Sbjct: 1 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGMLRTGMKKKGAGDEGGGGREEGGDRREAGGGEEGAWEEEGVEADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGLAFHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKGAKARNKGAGDKRLLHLKSFCPSWTPSLLPDMFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFKSEGEGEGGQAEEKCCQGNRVERLHDKALGRKRNRIGSHKCIPAQAALVSEFGRG 628
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|553186665|ref|XP_005854465.1| (zinc-binding dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294598|gb|EKU21898.1| zinc-binding dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0 Identity = 324/331 (97.89%), Postives = 326/331 (98.49%), Query Frame = 0 Query: 1 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGMLRTGMKKKGAGDEGGGGREEGGDRREAGGGEEGAWEEEGV-EADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGLAFHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKGAKARNKGAGDK 330 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGM RTG KK+GAGDEGGGGREEGGDRREAGGGEEGAWE+EGV EADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGL FHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKG KARNKGAGDK Sbjct: 45 MAGETLAYPLRYGYALVGRVVRCGADVADRERLMGREGGGEGAAPLVFAFSPHASRAVVAASSLLVVPPGISAEDAVYFPSVETALSLVQDARPLAGERVTVVGAGLIGLLVLAVLKRFPLGSLRAVDPLTVRRHLARRMGASVAVDPGMFRTGKKKEGAGDEGGGGREEGGDRREAGGGEEGAWEKEGVQEADTSIEVSGVAAGLQTAIDQTGYGGKVVIGSWYGNHETPAALRLGLTFHRSHLRLYVSQVSRISTELQDRWTKARRYQTAWRLLKEIRPSTTLTSRVVAPEQVKEAFHALDTQPAETLAVMIDYRMKGGKARNKGAGDK 375
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|298714366|emb|CBJ27423.1| (proteasome subunit alpha [Ectocarpus siliculosus]) HSP 1 Score: 370.933 bits (951), Expect = 3.029e-122 Identity = 177/224 (79.02%), Postives = 202/224 (90.18%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGF 573 MF TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK GV+LAVEKR++SPLLEP+SVEKIMEVD+HIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+RVEALTQ +CDLAL+F E G K MSRPFGVALL+AG+DD+G QLFFSDPSG + ++K KAIGSGSEGAQ+ LQE YSDS TL EAE LA+STLKQVMEEKI+ + VEV SVT++G+ Sbjct: 1 MFATRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPSSVEKIMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQLFFSDPSGMFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINPDNVEVASVTEKGY 224
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|397629616|gb|EJK69435.1| (hypothetical protein THAOC_09311 [Thalassiosira oceanica]) HSP 1 Score: 362.073 bits (928), Expect = 8.780e-119 Identity = 185/252 (73.41%), Postives = 215/252 (85.32%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGD-EKKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFKSEGEGEGGQAEEKCCQGNRVERL 597 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTA+G+ TKHG +LAVEKR++SPLLEP+SVEKI E+D+H+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EPI VEALTQG+CDLAL+F E DGD +K+MSRPFGVALL+AG+DD G QLFFSDPSGT+ Q+KAKAIG+GSEGAQ+ L ESY++ TLEEAE+LALSTLKQVMEEKIS E VE+ VT EG+G G E+ G +ERL Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKHGSVLAVEKRLTSPLLEPSSVEKIAEIDSHVGAAMSGLVADARTLVDHARVEAQNHRFTYDEPIGVEALTQGVCDLALSFGEGADGDKDKRMSRPFGVALLIAGWDDLNGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSTLSESYNEDMTLEEAEELALSTLKQVMEEKISTENVELARVT------EGKGYHGATAEEV--GAVLERL 244
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|224009700|ref|XP_002293808.1| (proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335] >gi|220970480|gb|EED88817.1| proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 357.836 bits (917), Expect = 4.811e-117 Identity = 180/231 (77.92%), Postives = 206/231 (89.18%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGD-EKKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKE-GFKS 575 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLLEP+SVEKI E+D HIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+E I VEALTQG+CDLAL+F E DGD +K+MSRPFGVALL+AG+DD KG QLFFSDPSGT+ Q+KAKAIG+GSEGAQ++L ESY++ TLEEAE+LALS LKQVMEEKIS E VE+ VT+E G+ S Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKSGSILAVEKRLTSPLLEPSSVEKIAEIDVHIGAAMSGLVADARTLVDHARVEAQNHRFTYDEAIGVEALTQGVCDLALSFGEGSDGDKDKRMSRPFGVALLIAGHDDLKGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSSLMESYNEDMTLEEAEELALSVLKQVMEEKISTENVELARVTEERGYHS 231
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|1210528787|dbj|GAX12657.1| (20S proteasome subunit alpha 5 [Fistulifera solaris]) HSP 1 Score: 356.681 bits (914), Expect = 1.359e-116 Identity = 179/229 (78.17%), Postives = 204/229 (89.08%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGDEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKE-GF 573 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLL+P SVEKI E+D+H+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+ VEALTQ +CDLAL+F E DGD KK MSRPFGVALLLAGYDD G QLFFSDPSGT+ ++KAKAIG+GSEGAQ+NL+ESYSD+ TL+EAE LALSTLKQVMEEKIS + +E+ VT E GF Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKEGCILAVEKRLTSPLLDPASVEKIAEIDSHMGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDDLDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDTMTLDEAEVLALSTLKQVMEEKISTDNIELARVTPEKGF 229
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|1072232815|gb|OEU17546.1| (proteasome subunit alpha [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 356.681 bits (914), Expect = 1.556e-116 Identity = 176/229 (76.86%), Postives = 203/229 (88.65%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGDE-KKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFK 574 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G +LAVEKR++SPLL+P SVEKI E+D+HIGAAMSGL+ DA+TLVDHARVEAQNH F+Y+EPI VE LTQ +CDLAL+F E DGD K+MSRPFGVALLLAG+DD +G QL+FSDPSGT+ ++KAKAIG+GSEGAQ+NL+ESYSDS TL+EAE+LALSTLKQVMEEKIS E +EV T GFK Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGCVLAVEKRLTSPLLDPESVEKIAEIDSHIGAAMSGLVADAKTLVDHARVEAQNHSFTYDEPIGVEPLTQAVCDLALSFGEGSDGDSAKRMSRPFGVALLLAGWDDLEGSQLYFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDSMTLKEAEELALSTLKQVMEEKISTENIEVARATPAGFK 229
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|219121310|ref|XP_002185881.1| (proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582730|gb|ACI65351.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 356.295 bits (913), Expect = 1.906e-116 Identity = 181/229 (79.04%), Postives = 204/229 (89.08%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGDEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKE-GF 573 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR+SSPLL+P+SVEKI EVD+HIGAAMSGL+ DARTLVDHARVEAQNH F+Y+EPI VEALTQ +CDLAL+F E DGD KK MSRPFGVALLLAGYD+ G QLFFSDPSGT+ ++KAKAIG+GSEGAQ+NL+ESYS++ TL EAE+LALSTLKQVMEEKIS E +E+ VT E GF Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKDGCILAVEKRLSSPLLDPSSVEKIAEVDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDELDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSETMTLNEAEELALSTLKQVMEEKISIENIELARVTPEKGF 229
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|1210513372|dbj|GAX27769.1| (20S proteasome subunit alpha 5 [Fistulifera solaris]) HSP 1 Score: 354.755 bits (909), Expect = 8.274e-116 Identity = 178/229 (77.73%), Postives = 204/229 (89.08%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGDEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKE-GF 573 M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLL+P SVEKI E+D+H+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+ VEALTQ +CDLAL+F E DGD KK MSRPFGVALLLAGYDD G QLFFSDPSGT+ ++KAKAIG+GSEGAQ+NL+ESYS++ TL+EAE LALSTLKQVMEEKIS + +E+ VT E GF Sbjct: 1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKEGCILAVEKRLTSPLLDPASVEKIAEIDSHMGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDDLDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSETMTLDEAEVLALSTLKQVMEEKISTDNIELARVTPEKGF 229
BLAST of EWM21400.1 vs. NCBI_GenBank
Match: gi|1198313276|gb|OUM69882.1| (hypothetical protein PIROE2DRAFT_52888 [Piromyces sp. E2]) HSP 1 Score: 344.354 bits (882), Expect = 7.632e-112 Identity = 164/234 (70.09%), Postives = 198/234 (84.62%), Query Frame = 0 Query: 350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVT-KEGFKSEGEGE 580 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIK+GSTA+G+ T GVILAVEKRI+S LLEP+S+EKI+E+D+H+G AMSGL DART++DHARV+AQNH F Y+EPI+VE++TQ ICDLAL F E G+E MSRPFGVALL+AG D+ GPQLF +DPSGT+ +++AKAIGSGSEGAQT LQE+Y S TL+EAE L+L LKQVMEEK+++ V++CSVT EGF+ E E Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKMGSTAIGIQTSEGVILAVEKRITSTLLEPSSIEKILEIDSHVGCAMSGLNADARTMIDHARVQAQNHTFVYDEPIKVESITQAICDLALRFGEGAQGEESIMSRPFGVALLIAGVDENGPQLFHADPSGTFTKYQAKAIGSGSEGAQTELQENYHKSLTLKEAETLSLKVLKQVMEEKVNSVNVQLCSVTPNEGFRIYSEDE 234 The following BLAST results are available for this feature:
BLAST of EWM21400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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