EWM21408.1, cds9265 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21408.1 vs. NCBI_GenBank
Match: gi|585101634|gb|EWM21408.1| (Protein kinase, ATP binding site, partial [Nannochloropsis gaditana]) HSP 1 Score: 265.388 bits (677), Expect = 1.303e-89 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 TSLVETEPAVESTQERVGTGAEAGEGDGEWIPFRELRFLEAVGAGRSGTLWRGVWKGREVAVKVVKVAAGATGKGEGGGRTNEGKEVGEARRAFERERRIVRGLRHQNLCPLLGVTREGRREAGGRYWPWCTPSWRAGL 139
TSLVETEPAVESTQERVGTGAEAGEGDGEWIPFRELRFLEAVGAGRSGTLWRGVWKGREVAVKVVKVAAGATGKGEGGGRTNEGKEVGEARRAFERERRIVRGLRHQNLCPLLGVTREGRREAGGRYWPWCTPSWRAGL
Sbjct: 1 TSLVETEPAVESTQERVGTGAEAGEGDGEWIPFRELRFLEAVGAGRSGTLWRGVWKGREVAVKVVKVAAGATGKGEGGGRTNEGKEVGEARRAFERERRIVRGLRHQNLCPLLGVTREGRREAGGRYWPWCTPSWRAGL 139
BLAST of EWM21408.1 vs. NCBI_GenBank
Match: gi|255077041|ref|XP_002502175.1| (predicted protein [Micromonas commoda] >gi|226517440|gb|ACO63433.1| predicted protein [Micromonas commoda]) HSP 1 Score: 59.6918 bits (143), Expect = 8.676e-8 Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 0
Query: 18 GTGAEAGEGDGEW-IPFRELRFLEAVGAGRSGTLWRGVWKGREVAVKVVKVAAGATGKGEGGGRTNEGKEVGEARRAFERERRIVRGLRHQNLCPLLG 114
G A AG D EW I +L F+E + +G G L+RG + G+EVA+KV+K GG + E E R F +E I+R +RH+N+ L+G
Sbjct: 166 GEKALAGASDSEWEIQEVQLNFMEKIASGAFGVLYRGSYCGQEVAIKVLKT---------GGKSSQE-----EVYREFAQELSILRKVRHKNIVQLIG 249
BLAST of EWM21408.1 vs. NCBI_GenBank
Match: gi|156370900|ref|XP_001628505.1| (predicted protein [Nematostella vectensis] >gi|156215483|gb|EDO36442.1| predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 59.6918 bits (143), Expect = 1.064e-7 Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 0
Query: 31 IPFRELRFLEAVGAGRSGTLWRGVWKGREVAVKVVKVAAGATGKGEGGGRTNEGKEVGEARRAFERERRIVRGLRHQNLCPLLGVTRE 118
IPFR + ++ +G G G ++RG+W+ EVAVKV RT+ ++ + + ++E RI LRHQN+ LLGV+ E
Sbjct: 70 IPFRNIELIDVIGVGAFGKVYRGIWRDEEVAVKV--------------ARTDNYEDFTQTLDSVKKEARIFSMLRHQNIVGLLGVSLE 143 The following BLAST results are available for this feature:
BLAST of EWM21408.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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