EWM21409.1, cds9264 (CDS) Nannochloropsis gaditana

Overview
NameEWM21409.1
Unique Namecds9264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:305610..305672 -
Alignment locationKK037252.1:305365..305425 -
Alignment locationKK037252.1:305204..305253 -
Alignment locationKK037252.1:304931..305051 -
Alignment locationKK037252.1:304570..304734 -
Alignment locationKK037252.1:304425..304483 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21409.1
ProductProtein kinase, catalytic domain protein
Orig transcript idgnl|cribi|Naga_100466g5.1605.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:305610..305672 -
KK037252.1supercontigKK037252.1:305365..305425 -
KK037252.1supercontigKK037252.1:305204..305253 -
KK037252.1supercontigKK037252.1:304931..305051 -
KK037252.1supercontigKK037252.1:304570..304734 -
KK037252.1supercontigKK037252.1:304425..304483 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|585101635|gb|EWM21409.1| (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 359.762 bits (922), Expect = 5.938e-126
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 
Query:    1 MDVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGLVWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGLLAPRSDPQTHVHPDSGHLKADTSRDRRRGSGGWRECLRCGGEGSQLEALPCGCKLMCRKVAKQSDKLITNNG 172
            MDVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGLVWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGLLAPRSDPQTHVHPDSGHLKADTSRDRRRGSGGWRECLRCGGEGSQLEALPCGCKLMCRKVAKQSDKLITNNG
Sbjct:    1 MDVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGLVWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGLLAPRSDPQTHVHPDSGHLKADTSRDRRRGSGGWRECLRCGGEGSQLEALPCGCKLMCRKVAKQSDKLITNNG 172
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|298707384|emb|CBJ30019.1| (serine/threonine protein kinase [Ectocarpus siliculosus])

HSP 1 Score: 156.762 bits (395), Expect = 1.640e-41
Identity = 74/109 (67.89%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL----------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL 100
            DV  GM YLH  G+MHRDLKPDN+L+DA  R VIADFGL            ETGTYR+MA EVIRHEPYS AADVYSFG+VLW+ L+R+QPFKG+TP+QAAF+V RQGL
Sbjct:  511 DVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFSHPTNDHTAETGTYRWMAPEVIRHEPYSQAADVYSFGVVLWQILARKQPFKGLTPLQAAFSVARQGL 619
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|635372021|emb|CCI39983.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 142.895 bits (359), Expect = 5.298e-37
Identity = 69/109 (63.30%), Postives = 81/109 (74.31%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQ 98
            DVA GM YLH   ++HRDLK  N+LID+ G V I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE ++++QPF+GMTPIQAAFAV RQ
Sbjct:  356 DVAMGMNYLHLCSVIHRDLKSGNILIDSHGLVKISDFGLSCLLDNGSTSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWEMIAKDQPFRGMTPIQAAFAVARQ 464
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|970635507|gb|KUF80380.1| (serine/threonine-protein kinase [Phytophthora nicotianae])

HSP 1 Score: 144.05 bits (362), Expect = 5.552e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  451 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 571
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|325180262|emb|CCA14665.1| (serine/threonine protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 140.969 bits (354), Expect = 6.732e-37
Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQ 98
            D+A GM YLH   ++HRDLK  N+LID+ G + ++DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE ++++QPF+GMTPIQAAFAV RQ
Sbjct:  250 DIAMGMNYLHLCSVIHRDLKSGNILIDSHGLIKVSDFGLSCLVDNGSTSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWEIIAKDQPFRGMTPIQAAFAVARQ 358
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|970656467|gb|KUF94474.1| (Alcohol dehydrogenase 3 [Phytophthora nicotianae])

HSP 1 Score: 144.05 bits (362), Expect = 6.896e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  507 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 627
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|570319579|gb|ETO67527.1| (TKL protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 144.05 bits (362), Expect = 7.410e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  538 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 658
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|675172555|ref|XP_008895162.1| (TKL protein kinase [Phytophthora parasitica INRA-310] >gi|566015820|gb|ETI38731.1| TKL protein kinase [Phytophthora parasitica P1569] >gi|567981944|gb|ETL32378.1| TKL protein kinase [Phytophthora parasitica] >gi|568041357|gb|ETM38774.1| TKL protein kinase [Phytophthora parasitica] >gi|568104656|gb|ETN19301.1| TKL protein kinase [Phytophthora parasitica INRA-310] >gi|570974231|gb|ETP36680.1| TKL protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 144.05 bits (362), Expect = 7.410e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  538 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 658
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|567953290|gb|ETK78947.1| (TKL protein kinase [Phytophthora parasitica] >gi|568011442|gb|ETL85620.1| TKL protein kinase [Phytophthora parasitica] >gi|570943386|gb|ETP08643.1| TKL protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 144.05 bits (362), Expect = 7.483e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  538 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 658
[Close]
BLAST of EWM21409.1 vs. NCBI_GenBank
Match: gi|301115766|ref|XP_002905612.1| (serine/threonine protein kinase [Phytophthora infestans T30-4] >gi|262110401|gb|EEY68453.1| serine/threonine protein kinase [Phytophthora infestans T30-4])

HSP 1 Score: 144.05 bits (362), Expect = 8.002e-37
Identity = 73/121 (60.33%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    2 DVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGL------------VWETGTYRYMASEVIRHEPYSTAADVYSFGIVLWETLSREQPFKGMTPIQAAFAVVRQGL--LAPRSDPQ 108
            ++A GM YLH   IMHRDLK  N+LID+ G   I+DFGL              ETGTYR+MA EVIRHEPYS+ ADVYSFGIVLWE L+R+QPF+G+TPIQAAFAV RQ +    PR  PQ
Sbjct:  545 EMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLEIGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQQMRPALPRQTPQ 665
The following BLAST results are available for this feature:
BLAST of EWM21409.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101635|gb|EWM21409.1|5.938e-126100.00Protein kinase, catalytic domain protein [Nannochl... [more]
gi|298707384|emb|CBJ30019.1|1.640e-4167.89serine/threonine protein kinase [Ectocarpus silicu... [more]
gi|635372021|emb|CCI39983.1|5.298e-3763.30unnamed protein product [Albugo candida][more]
gi|970635507|gb|KUF80380.1|5.552e-3760.33serine/threonine-protein kinase [Phytophthora nico... [more]
gi|325180262|emb|CCA14665.1|6.732e-3760.55serine/threonine protein kinase putative [Albugo l... [more]
gi|970656467|gb|KUF94474.1|6.896e-3760.33Alcohol dehydrogenase 3 [Phytophthora nicotianae][more]
gi|570319579|gb|ETO67527.1|7.410e-3760.33TKL protein kinase [Phytophthora parasitica P1976][more]
gi|675172555|ref|XP_008895162.1|7.410e-3760.33TKL protein kinase [Phytophthora parasitica INRA-3... [more]
gi|567953290|gb|ETK78947.1|7.483e-3760.33TKL protein kinase [Phytophthora parasitica] >gi|5... [more]
gi|301115766|ref|XP_002905612.1|8.002e-3760.33serine/threonine protein kinase [Phytophthora infe... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9294rna9294Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications