EWM21411.1, cds9263 (CDS) Nannochloropsis gaditana

Overview
NameEWM21411.1
Unique Namecds9263
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:299739..299799 +
Alignment locationKK037252.1:300177..300346 +
Alignment locationKK037252.1:300456..300582 +
Alignment locationKK037252.1:300886..301140 +
Alignment locationKK037252.1:301354..301614 +
Alignment locationKK037252.1:301716..301950 +
Alignment locationKK037252.1:302130..302751 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21411.1
Producttrifunctional enzyme subunit mitochondrial
Orig transcript idgnl|cribi|Naga_100466g3.1607.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:299739..299799 +
KK037252.1supercontigKK037252.1:300177..300346 +
KK037252.1supercontigKK037252.1:300456..300582 +
KK037252.1supercontigKK037252.1:300886..301140 +
KK037252.1supercontigKK037252.1:301354..301614 +
KK037252.1supercontigKK037252.1:301716..301950 +
KK037252.1supercontigKK037252.1:302130..302751 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR018376Enoyl-CoA_hyd/isom_CS
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
IPR0061763-OHacyl-CoA_DH_NAD-bd
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|585101637|gb|EWM21411.1| (trifunctional enzyme subunit mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 1174.07 bits (3036), Expect = 0.000e+0
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0
Query:    1 MLRLASARASLRLNGLGAFQGTATCPSFLKRASLSTRGQYFAPVEVKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALMEGALVASLGIGCLAWLLSPRLKI 576
            MLRLASARASLRLNGLGAFQGTATCPSFLKRASLSTRGQYFAPVEVKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALMEGALVASLGIGCLAWLLSPRLKI
Sbjct:    1 MLRLASARASLRLNGLGAFQGTATCPSFLKRASLSTRGQYFAPVEVKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALMEGALVASLGIGCLAWLLSPRLKI 576          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|298708157|emb|CBJ30498.1| (Trifunctional enzyme subunit alpha [Ectocarpus siliculosus])

HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0
Identity = 341/520 (65.58%), Postives = 413/520 (79.42%), Query Frame = 0
Query:   39 QYFAPVE-VKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALMEGAL 557
            ++F PVE + +GVAIIRIDGP KMNTI  +FRQEI+ +W+ ++A D SVKA V IS KPDN+IAGADI+ I + ED A LK +C+ GHATF  + K   P++AAI+G  LGGGLE AL+CDYR+ T+SPKTVLGLPEVKLGLLPG+GGTQ LHP+VGLQAALDM LTGKNIRP KA KMGL D +VD A+LE VAVE A +LA+GSLK KRK K L+ K++EDT MGRSI++ +  + VAK+TGG+YP  TAI+D IK+G + SK  ALEYEA RF+E+AAT  S +L G+F G+TALK++++GKPA  VE VAV+GAGLMGAGIAQV+AEKG  VLLKD+D A V +G  YI DN   K+KK+RMTKY  DT  SRV+ LTDE   W + FG A+MVIEAV E+L LKH+VIQQ E+ LP   VFA+NTSA+PI  IA+AS+RP+NV+GMHYFSPVP MPLLEIIPH GTS  AAAAA +VG +QGKT I VKDVPGFYVNRCLGP+LVET AL+E  +
Sbjct:   18 RFFQPVEKLDNGVAIIRIDGPEKMNTISGDFRQEIEDIWSGQIAEDPSVKAVVFISGKPDNYIAGADIRMISATEDKADLKQICMDGHATFDILAKKGIPVIAAINGACLGGGLEWALHCDYRLATTSPKTVLGLPEVKLGLLPGWGGTQLLHPLVGLQAALDMILTGKNIRPHKALKMGLVDQLVDAASLEAVAVEAAASLADGSLKSKRKPKALMNKIIEDTPMGRSIMWKKVGEKVAKSTGGNYPNATAIVDCIKFGLSSSKQAALEYEAQRFSEMAATPESESLIGLFEGSTALKKNRFGKPAKKVEKVAVLGAGLMGAGIAQVSAEKGMTVLLKDRDSASVGKGTSYIMDNAAAKLKKRRMTKYEMDTVGSRVIPLTDEGDLWKRHFGSAEMVIEAVPENLDLKHRVIQQAEQFLPEDCVFATNTSALPIRDIAKASKRPQNVVGMHYFSPVPMMPLLEIIPHDGTSDAAAAAAVDVGGRQGKTCIVVKDVPGFYVNRCLGPFLVETCALVEAGV 537          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|219117702|ref|XP_002179641.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408694|gb|EEC48627.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 298/485 (61.44%), Postives = 361/485 (74.43%), Query Frame = 0
Query:   70 QEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPAN-PVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            +E   LW D++A+++ VKA V  SAKPD FIAGADI  I +VE+   L      G   FQ +R    PLVAAI GPALGGGLE AL+CDYRI T S KT +GLPEVKLGLLPGFGGTQNLHP+VGLQ A+DM LTGK+IRP +AKKMGL D+VV  A+LE VA+++A ALA GSLK KRK K +  K+LED S+GR++++ Q +KMV KNT G YPAP AI+D +K+G  +   Q  ++E   FA+LAAT  S AL GIF G T +K+  +G  A  PV+TVAV+GAGLMGAGIAQVTAEKG +VLLKD++   V RG+ Y+++N   K+K+KRMT+Y Y+  TS V  LTD+S  W + FG ADMVIEAVFEDL LK K++  +E     H +FA+NTSAIPIA IA+ + RPEN+IGMHYFSPVP MPLLEIIPH GTS  A A AFE+G KQGKT I VKDVPGFYVNRCLGPYLVE  AL+
Sbjct:    3 EEAKKLWKDEIASNSDVKAVVFSSAKPDMFIAGADIFDIKAVENKQDLIPFIADGVKFFQDMRGKGVPLVAAIDGPALGGGLEWALWCDYRICTDSSKTKMGLPEVKLGLLPGFGGTQNLHPVVGLQNAMDMMLTGKDIRPHQAKKMGLVDLVVAQASLERVAIDSAAALANGSLKAKRKSKSMFNKILEDNSIGRNVIWNQIDKMVQKNTNGKYPAPYAIIDCVKFGLDNPS-QKYQHEREEFAKLAATPESEALIGIFDGMTQMKKHSFGADAAIPVKTVAVMGAGLMGAGIAQVTAEKGIKVLLKDRNDEAVGRGQSYMTENWSKKLKRKRMTQYQYNLNTSNVTALTDDSPTWQRHFGNADMVIEAVFEDLDLKRKIVANVESVTKDHCIFATNTSAIPIADIAQGASRPENIIGMHYFSPVPSMPLLEIIPHTGTSDTATATAFEIGSKQGKTCIVVKDVPGFYVNRCLGPYLVEVSALV 486          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|1072233972|gb|OEU18702.1| (3HCDH_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 584.334 bits (1505), Expect = 0.000e+0
Identity = 299/518 (57.72%), Postives = 375/518 (72.39%), Query Frame = 0
Query:   39 QYFAPVE-VKDGVAIIRIDGPGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKP-ANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANW-GKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            +YF  VE  K+GVAIIR D P K+NTI      E   LW  ++ N++ VKA V  SAKPD FIAGADI  I  +E+   L  +  +G   FQ +R+   PLV AI+GPALGGGLE A++CDYR+ + SPKT LGLPEVKLGLLPGFGGTQNLH +VGLQ A+DM LTGK+IRP KAKKMGL D+VV   ++E  A+++A  +  G LK K+K K L+ ++LEDTS+G+ I++ Q  KMV KNT G+YPAP AI+  +++G  + +    E E   FA+LAAT  S AL GIF G T +K++ +    A PV+TVAV+GAGLMGAGIAQ+TAEKG  VLLKD++ A + RG  Y+ DN   K+K+KRMTK+ ++  +S VVGLTD++ N   K FG  DM+IEAVFEDL LK K++  +E+  P H VFA+NTSAIPI  IAE S+RPEN+IGMHYFSPVP MPLLEIIPH+GT++   A AF VG KQGKT I VKDVPGFYVNRCLGP+LVE  AL+
Sbjct:   55 EYFTNVEFTKEGVAIIRFDCPNKVNTISFALSDEARQLWKGEIENNSDVKAVVFSSAKPDMFIAGADIFDIKRIENKNDLVGLIEEGVTFFQHMREKKVPLVCAINGPALGGGLEWAMWCDYRVCSDSPKTKLGLPEVKLGLLPGFGGTQNLHELVGLQNAMDMMLTGKDIRPHKAKKMGLVDLVVSSQSVEKDAIQSAVDIINGKLKPKKKAKSLMNRLLEDTSIGQKIIWNQINKMVQKNTNGNYPAPNAIIRCVQHGIAN-RSTRFENEREEFAKLAATDESEALIGIFDGMTQMKKNPFDNTVAVPVKTVAVMGAGLMGAGIAQITAEKGMSVLLKDRNDAAIERGGSYMRDNWDKKLKRKRMTKFQHNLNSSNVVGLTDDNPNLVEKHFGNTDMIIEAVFEDLDLKRKIVADIEKITPDHCVFATNTSAIPIGAIAEGSKRPENIIGMHYFSPVPSMPLLEIIPHEGTNEATRATAFNVGTKQGKTCIVVKDVPGFYVNRCLGPFLVEVSALI 571          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|1210516457|dbj|GAX24624.1| (enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [Fistulifera solaris])

HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0
Identity = 306/522 (58.62%), Postives = 376/522 (72.03%), Query Frame = 0
Query:   39 QYFAPVEVKD-GVAIIRIDGPGK-MNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTAL-KQSKYGKPAN--PVETVAVVGAGLMGAGIAQVTAEK-GY-RVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            ++F  VE+ D GVA+I+ D PGK +NTI   F +E   LW  ++ N++ VKA V  SAKP+ FIAGADI  I  +E+   L  +   G   FQ  ++   PLVAAI GPALGGGLE AL+CDYR+ T S KT LGLPEVKLGLLPGFGGTQNL   VGLQ A+DM LTGK IRPDKAKKMGL D+VV PA+L   A++ A  LA G LK K+K K  + ++LEDTSMGRSI++ Q +KMV KNT GHYPAP +I+  ++YG  +   +  + E  +FA+LAAT  S AL G+F GTTAL KQ +  K  N   V+TVAV+GAGLMGAGIAQVTAEK GY ++LLKD++   V+RG+ Y+ DN   K++KKRM+ Y  +   S VV LTD + +W + F KAD++IEAVFEDL+LK K++  +E   P H VFA+NTSAIPI  IA  ++RPEN+IGMHYFSPVP MPLLEIIPH+GTS E  A AF VG KQGKT I VKDVPGFYVNRCLGPYLVE  AL+
Sbjct:   80 EFFRNVEINDKGVALIQFDCPGKSVNTISFAFAKEAQQLWQTEIHNNSRVKAVVFTSAKPNMFIAGADIFDIKQIENKQDLIPLIQNGVEFFQSWKQEGLPLVAAIEGPALGGGLEWALWCDYRVCTDSSKTKLGLPEVKLGLLPGFGGTQNLPATVGLQNAMDMMLTGKEIRPDKAKKMGLVDLVVAPASLRQAAMDAAEQLATGKLKPKKKPKSWMNRLLEDTSMGRSIIWNQIDKMVKKNTDGHYPAPFSIIQCVQYGLENPAAR-FKNEREQFAKLAATPESQALIGLFEGTTALKKQDEQFKVPNLRKVDTVAVLGAGLMGAGIAQVTAEKCGYSQILLKDRNDEAVARGQAYLYDNWTKKVQKKRMSDYQRNKNFSSVVPLTDTTPSWKQHFSKADVIIEAVFEDLTLKQKIVADMEAVTPDHCVFATNTSAIPIRDIAANAKRPENIIGMHYFSPVPNMPLLEIIPHEGTSDETKAIAFNVGTKQGKTCIVVKDVPGFYVNRCLGPYLVEVSALV 600          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|1210513109|dbj|GAX27925.1| (enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [Fistulifera solaris])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 304/522 (58.24%), Postives = 377/522 (72.22%), Query Frame = 0
Query:   39 QYFAPVEVKD-GVAIIRIDGPGK-MNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTAL-KQSKYGKPAN--PVETVAVVGAGLMGAGIAQVTAEK-GY-RVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            ++F  VE+ D GVA+I+ D PGK +NTI   F +E   LW  ++ N+++VKA V  SAKP+ FIAGADI  I  +E+   L  +   G   FQ  +K   PLVAAI GPALGGGLE AL+CDYR+ + S KT LGLPEVKLGLLPGFGGTQNL   VGLQ A+DM LTGK IRPDKAKKMGL D+VV PA+L   A++ A  LA G LK K+K K  + ++LEDTSMGRS+++ Q +KMV KNT GHYPAP +I+  ++YG  +   +  + E  +F++LAAT  S AL G+F GTTAL KQ +  K  N   V+TVAV+GAGLMGAGIAQVTAEK GY ++LLKD++   V+RG+ Y+ DN   K++KKRM+ Y  +   S VV LTD + +W + F KAD++IEAVFEDL+LK K++  +E   P H VFA+NTSAIPI  IA  ++RPEN+IGMHYFSPVP MPLLEIIPH+GTS E  A AF VG KQGKT I VKDVPGFYVNRCLGPYLVE  AL+
Sbjct:   74 EFFRNVEINDQGVALIQFDCPGKSVNTISFAFAKEAQQLWQTEIHNNSNVKAVVFTSAKPNMFIAGADIFDIKQIENKQDLIPLIQDGVEFFQSWKKEGLPLVAAIDGPALGGGLEWALWCDYRVCSDSSKTKLGLPEVKLGLLPGFGGTQNLPATVGLQNAMDMMLTGKEIRPDKAKKMGLVDLVVAPASLRQAALDAAAQLATGKLKPKKKPKSWMNRLLEDTSMGRSVIWNQIDKMVKKNTDGHYPAPFSIIQCVQYGLENPAAR-FKNEREQFSKLAATPESQALIGLFEGTTALKKQDEQFKVPNLRKVDTVAVLGAGLMGAGIAQVTAEKCGYSQILLKDRNDEAVARGQAYLYDNWTKKVQKKRMSDYQRNKNFSSVVPLTDTTPSWKQHFSKADVIIEAVFEDLTLKQKIVADMEAVTPDHCVFATNTSAIPIRDIAANAKRPENIIGMHYFSPVPNMPLLEIIPHEGTSDETKAIAFNVGTKQGKTCIVVKDVPGFYVNRCLGPYLVEVSALV 594          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|675181833|ref|XP_008899801.1| (fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica INRA-310] >gi|568100503|gb|ETN15202.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica INRA-310] >gi|570995668|gb|ETP52469.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica P10297])

HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0
Identity = 299/542 (55.17%), Postives = 368/542 (67.90%), Query Frame = 0
Query:   27 SFLKRASLSTR-------------GQYFAPVEVK-DGVAIIRIDGPG-KMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            S L+RA+LS R                F  +E + +GVAI+R+D    K+NTI      E+  +  D V ND +VK+ V+ISAKP  FIAGADI  +++ +    ++D+   G A   ++  + KP VAAI G  +GGGLEVAL C YR+   S KT L LPEV LGLLPG GGTQ L  +VG+QAALDM LTGKNI+PDKA KMGL + V DP ALE  A+  A  LA GSLK K+K KGL+ ++LEDT + R IV+ +  +MV K TGGHYPAP  IL+  + G      + LE EAT FA+L  TS + AL  IF G TALK+++YGKPA PVET+AVVGAGLMGAGIAQV+A KG RVLLKD+D A  ++GE Y+  NL  K+K+KRMT Y  D   + VV L+DE   W     KAD+ IEAVFEDL+LKHKV+  LE ++    V A+NTSA+PIA IA A +RPENVIGMHYFSPVP MPLLEII H GTS   AA A ++G +QGKT I VKDVPGFYVNRCLGPY+ ET AL+
Sbjct:    7 SILRRAALSARLASSRAFSSAASSSGAFLTMETRSNGVAIVRLDDKAAKVNTISSKMTAEMTTML-DTVENDPNVKSVVLISAKPGVFIAGADIAELNACKTEEEMRDMSRAGQAFMNRLAGSKKPFVAAIEGSCMGGGLEVALACHYRVAAKSKKTQLALPEVMLGLLPGAGGTQRLPKLVGIQAALDMMLTGKNIKPDKALKMGLVNQVADPFALENAAISAAEQLASGSLKPKKKNKGLVNRILEDTPL-RQIVFNKAGEMVEKKTGGHYPAPKLILEAAQTGIEQGITKGLEVEATNFAKLGMTSEAKALMSIFFGQTALKKNRYGKPAKPVETMAVVGAGLMGAGIAQVSAAKGVRVLLKDRDAAAAAKGEDYVRSNLDQKVKRKRMTIYDRDAVMANVVPLSDEDEVWKTHIKKADLAIEAVFEDLALKHKVLSDLENYVSKDCVIATNTSALPIADIASACKRPENVIGMHYFSPVPSMPLLEIIRHAGTSDATAAKAVDLGLRQGKTAIVVKDVPGFYVNRCLGPYIAETLALV 546          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|970642286|gb|KUF84004.1| (hypothetical protein AM587_10008513 [Phytophthora nicotianae])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 299/542 (55.17%), Postives = 368/542 (67.90%), Query Frame = 0
Query:   27 SFLKRASLSTR-------------GQYFAPVEVK-DGVAIIRIDGPG-KMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            S L+RA+LS R                F  +E + +GVAI+R+D    K+NTI      E+  +  D V ND +VK+ V+ISAKP  FIAGADI  +++ +    ++D+   G A   ++  + KP VAAI G  +GGGLEVAL C YR+   S KT L LPEV LGLLPG GGTQ L  +VG+QAALDM LTGKNI+PDKA KMGL + V DP ALE  A+  A  LA GSLK K+K KGL+ ++LEDT + R IV+ +  +MV K TGGHYPAP  IL+  + G      + LE EAT FA+L  TS + AL  IF G TALK+++YGKPA PVET+AVVGAGLMGAGIAQV+A KG RVLLKD+D A  ++GE Y+  NL  K+K+KRMT Y  D   + VV L+DE   W     KAD+ IEAVFEDL+LKHKV+  LE ++    V A+NTSA+PIA IA A +RPENVIGMHYFSPVP MPLLEII H GTS   AA A ++G +QGKT I VKDVPGFYVNRCLGPY+ ET AL+
Sbjct:    7 SILRRAALSARLASSRAFSSAASSSGAFLTMETRSNGVAIVRLDDKAAKVNTISSKMTAEMTTML-DTVENDPNVKSVVLISAKPGVFIAGADIAELNACKTEEEMRDMSRAGQAFMNRLAGSKKPFVAAIEGSCMGGGLEVALACHYRVAAKSKKTQLALPEVMLGLLPGAGGTQRLPKLVGIQAALDMMLTGKNIKPDKALKMGLVNQVADPFALENAAISAAEQLASGSLKPKKKNKGLVNRILEDTPL-RQIVFNKAGEMVEKKTGGHYPAPKLILEAAQTGIEQGITKGLEVEATNFAKLGMTSEAKALMSIFFGQTALKKNRYGKPAKPVETMAVVGAGLMGAGIAQVSAAKGVRVLLKDRDAAAAAKGEDYVRSNLDQKVKRKRMTIYDRDAVMANVVPLSDEDEVWKTHIKKADLAIEAVFEDLALKHKVLSDLENYVSKDCVIATNTSALPIADIASAXKRPENVIGMHYFSPVPSMPLLEIIRHAGTSDATAAKAVDLGLRQGKTAIVVKDVPGFYVNRCLGPYIAETLALV 546          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|566031761|gb|ETI54672.1| (fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica P1569] >gi|567969455|gb|ETK94542.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica] >gi|567997837|gb|ETL47916.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica] >gi|568027060|gb|ETM01028.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica] >gi|568057544|gb|ETM54206.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica] >gi|570335483|gb|ETO83431.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica P1976] >gi|570959544|gb|ETP24523.1| fatty acid oxidation complex, alpha subunit, mitochondrial [Phytophthora parasitica CJ01A1])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 299/542 (55.17%), Postives = 368/542 (67.90%), Query Frame = 0
Query:   27 SFLKRASLSTR-------------GQYFAPVEVK-DGVAIIRIDGPG-KMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSLKGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQALEYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEASQRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALM 553
            S L+RA+LS R                F  +E + +GVAI+R+D    K+NTI      E+  +  D V ND +VK+ V+ISAKP  FIAGADI  +++ +    ++D+   G A   ++  + KP VAAI G  +GGGLEVAL C YR+   S KT L LPEV LGLLPG GGTQ L  +VG+QAALDM LTGKNI+PDKA KMGL + V DP ALE  A+  A  LA GSLK K+K KGL+ ++LEDT + R IV+ +  +MV K TGGHYPAP  IL+  + G      + LE EAT FA+L  TS + AL  IF G TALK+++YGKPA PVET+AVVGAGLMGAGIAQV+A KG RVLLKD+D A  ++GE Y+  NL  K+K+KRMT Y  D   + VV L+DE   W     KAD+ IEAVFEDL+LKHKV+  LE ++    V A+NTSA+PIA IA A +RPENVIGMHYFSPVP MPLLEII H GTS   AA A ++G +QGKT I VKDVPGFYVNRCLGPY+ ET AL+
Sbjct:    7 SILRRAALSARLASSRAFSSAASSSGAFLTMETRSNGVAIVRLDDKAAKVNTISSKMTAEMTTML-DTVENDPNVKSVVLISAKPGVFIAGADIAELNACKTEEEMRDMSRAGQAFMNRLAGSKKPFVAAIEGSCMGGGLEVALACHYRVAAKSKKTQLALPEVMLGLLPGAGGTQRLPKLVGIQAALDMMLTGKNIKPDKALKMGLVNQVADPFALENAAISAAEQLASGSLKPKKKNKGLVNRILEDTPL-RQIVFNKAGEMVEKKTGGHYPAPKLILEAAQTGIEQGLTKGLEVEATNFAKLGMTSEAKALMSIFFGQTALKKNRYGKPAKPVETMAVVGAGLMGAGIAQVSAAKGVRVLLKDRDAAAAAKGEDYVRSNLDQKVKRKRMTIYDRDAVMANVVPLSDEDEVWKTHIKKADLAIEAVFEDLALKHKVLSDLENYVSKDCVIATNTSALPIADIASACKRPENVIGMHYFSPVPSMPLLEIIRHAGTSDATAAKAVDLGLRQGKTAIVVKDVPGFYVNRCLGPYIAETLALV 546          
BLAST of EWM21411.1 vs. NCBI_GenBank
Match: gi|397569529|gb|EJK46802.1| (hypothetical protein THAOC_34515 [Thalassiosira oceanica])

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 296/525 (56.38%), Postives = 367/525 (69.90%), Query Frame = 0
Query:   39 QYFAPVEVKD-GVAIIRIDG-PGKMNTIDDNFRQEIDALWTDKVANDASVKAAVIISAKPDNFIAGADIKFIDSVEDFASLKDVCLKGHATFQKIRKANKPLVAAIHGPALGGGLEVALYCDYRIVTSSPKTVLGLPEVKLGLLPGFGGTQNLHPIVGLQAALDMTLTGKNIRPDKAKKMGLADVVVDPAALETVAVETARALAEGSL-KGKRKGKGLLQKVLEDTSMGRSIVYGQTEKMVAKNTGGHYPAPTAILDTIKYGFTHSKPQAL---EYEATRFAELAATSVSAALRGIFTGTTALKQSKYGKPANPVETVAVVGAGLMGAGIAQVTAEKGYRVLLKDKDLAGVSRGEKYISDNLKGKMKKKRMTKYAYDTTTSRVVGLTDESANWGKQFGKADMVIEAVFEDLSLKHKVIQQLEEHLPPHAVFASNTSAIPIARIAEAS---QRPENVIGMHYFSPVPQMPLLEIIPHKGTSKEAAAAAFEVGKKQGKTVIFVKDVPGFYVNRCLGPYLVETGALME 554
            ++F  VEV   GVA+IR D    K+NT+      E  A+W  +V  +A VK+ V  SAK   F+AGADI  I SVED ++L  V  +    F  ++    P+VAAIHGPALGGGLE AL+CDYRI T S  T +GLPEVKLGLLPGFGGTQNL  +VG+Q A+D+ LTGK+IRP KAK+MGL D+VV P +LE VA+ETA  LA G++ K   K K L+ +++EDT  GR +++ Q +KMV KNT G+YPAP  I+D +KYG  +  P  L   ++E   FA+LAATS S +L GIF G   LK+        PV  VAV+GAGLMGAGIAQVTAEKGY VLLKD+D A + RG  Y++DN   K K++RMT+Y  +   SRV  L+D + +W + F  AD+VIEAVFE+L LK K+I Q+EE  P H VFA+NTSAIPIA IA       RP+NV+GMHYFSPVP MPLLEIIPH+GTS+EA A AF VG KQGKT + VKDVPGFYVNRCLGP LVET AL++
Sbjct:  107 RFFRNVEVTPAGVAVIRFDNREKKVNTLSFELMHEAKAMWDAEVHANADVKSVVFTSAKESGFVAGADIFDISSVEDKSTLVPVIEEALDFFLHMKSKGAPMVAAIHGPALGGGLEWALWCDYRICTDSSSTKMGLPEVKLGLLPGFGGTQNLPALVGVQGAIDIMLTGKDIRPKKAKQMGLVDLVVAPQSLEAVAIETAEGLANGTVRKSGPKKKSLVNRLVEDTPPGRHVMWNQVKKMVDKNTAGNYPAPYEIIDCVKYGLAN--PDGLGKYKHEREGFAKLAATSESESLIGIFDGMNKLKKHDSDASPVPVRKVAVMGAGLMGAGIAQVTAEKGYDVLLKDRDDASLGRGVSYMTDNWSKKTKRRRMTQYQNNLNQSRVTPLSDATPSWPRHFAGADLVIEAVFENLELKRKIISQVEEVTPDHCVFATNTSAIPIADIAAPGPEVSRPQNVVGMHYFSPVPSMPLLEIIPHEGTSEEATATAFAVGTKQGKTCVVVKDVPGFYVNRCLGPVLVETSALVK 629          
The following BLAST results are available for this feature:
BLAST of EWM21411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101637|gb|EWM21411.1|0.000e+0100.00trifunctional enzyme subunit mitochondrial [Nannoc... [more]
gi|298708157|emb|CBJ30498.1|0.000e+065.58Trifunctional enzyme subunit alpha [Ectocarpus sil... [more]
gi|219117702|ref|XP_002179641.1|0.000e+061.44predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072233972|gb|OEU18702.1|0.000e+057.723HCDH_N-domain-containing protein [Fragilariopsis ... [more]
gi|1210516457|dbj|GAX24624.1|0.000e+058.62enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA... [more]
gi|1210513109|dbj|GAX27925.1|0.000e+058.24enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA... [more]
gi|675181833|ref|XP_008899801.1|0.000e+055.17fatty acid oxidation complex, alpha subunit, mitoc... [more]
gi|970642286|gb|KUF84004.1|0.000e+055.17hypothetical protein AM587_10008513 [Phytophthora ... [more]
gi|566031761|gb|ETI54672.1|0.000e+055.17fatty acid oxidation complex, alpha subunit, mitoc... [more]
gi|397569529|gb|EJK46802.1|0.000e+056.38hypothetical protein THAOC_34515 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9293rna9293Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications