EWM21418.1, cds9244 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|585101646|gb|EWM21418.1| (dhhc zinc finger domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 748.043 bits (1930), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 Query: 1 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN 368 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN Sbjct: 1 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN 368
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|553183546|ref|XP_005853919.1| (dhhc zinc finger domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|553190915|ref|XP_005855290.1| dhhc zinc finger domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293768|gb|EKU21068.1| dhhc zinc finger domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422295140|gb|EKU22439.1| dhhc zinc finger domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0 Identity = 353/368 (95.92%), Postives = 353/368 (95.92%), Query Frame = 0 Query: 1 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN 368 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPF ARHHYLIYLSPPPPSSSLGPS PSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN Sbjct: 1 MLSPIAESPLKEQAAEQDEEGETKNVNHSRDVEHVVEEDEENLLSADALRRRIQESTRCGKPFRGTPMEMESGCEALRTPSPWLSSAPYISLGTTSMPSSAPAGHLGATHSPLPSRSASSSRTNPWRRPLDLLISTRNIVGQILSFSRGGMECPLPVLYDEDHPDPFV------------TARHHYLIYLSPPPPSSSLGPSLPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRVEN 356
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|1173945023|gb|OQR93699.1| (dhhc zinc finger domain-containing protein [Thraustotheca clavata]) HSP 1 Score: 129.798 bits (325), Expect = 3.319e-32 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0 Query: 214 GRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSV----PPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLA 351 G + VGPHW GV+ T+ L+ +++ LFI C L ++ L + +T+ L +T C DPG++ R P + YC IC ++ HC+DCGVCIE DHHCPWMG C+G NM F FN W+ Y++FV+A Sbjct: 73 GPIILVGPHWIGVLVTLALIVVSTILFIDQQCSQLNGWYTLASLACASITIYFLFQTTCTDPGIVPRGTIQTDPAIIAHCSYCDICDVHQQRGTEHCDDCGVCIENYDHHCPWMGKCIGKKNMKWFQLFNMAWVLYLVFVIA 214
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|669162078|ref|XP_008616601.1| (hypothetical protein SDRG_12314 [Saprolegnia diclina VS20] >gi|530731792|gb|EQC30034.1| hypothetical protein SDRG_12314 [Saprolegnia diclina VS20]) HSP 1 Score: 129.798 bits (325), Expect = 4.870e-32 Identity = 62/152 (40.79%), Postives = 84/152 (55.26%), Query Frame = 0 Query: 219 VGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLI----TRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRV 366 VGPHW GV+ T+ L+ +++ LFI C L ++ L + T L +T C DPG++ T+S P L YC IC ++ HC+DCGVCIE DHHCPWMG C+G NM F FN W+ Y++FVL + A+RV Sbjct: 82 VGPHWIGVLVTLGLIIVSTILFIGQQCAELDAWYTLASLGMAAATSYFLFQTTCTDPGIVARGTTQSDPAILATCSYCDICDVHQFRGTEHCDDCGVCIEKYDHHCPWMGKCIGKKNMKWFQLFNLAWIVYLVFVLTVTMQNASSNFVASRV 233
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|813178410|ref|XP_012205674.1| (hypothetical protein SPRG_11139 [Saprolegnia parasitica CBS 223.65] >gi|641529520|gb|KDO23691.1| hypothetical protein SPRG_11139 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 128.642 bits (322), Expect = 1.683e-31 Identity = 60/152 (39.47%), Postives = 81/152 (53.29%), Query Frame = 0 Query: 219 VGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSV----PPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNATRV 366 VGPHW GV+ T L+ +++ LFI C L ++ L + T L +T C DPG++ R P + YC IC ++ HC+DCGVCIE DHHCPWMG C+G NM F FN W+ Y++FVL + A+RV Sbjct: 83 VGPHWIGVLVTTGLIIVSTILFIGQQCAALDAWYTLASLAMATATCYFLFQTTCTDPGIVARGTTQTDPAIIATCSYCDICDVHQFRGTEHCDDCGVCIEKYDHHCPWMGKCIGKKNMKWFQLFNLAWIVYLVFVLTVTMQNASSNFVASRV 234
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|1214685010|gb|OWZ02246.1| (Transmembrane protein [Phytophthora megakarya]) HSP 1 Score: 128.642 bits (322), Expect = 6.381e-31 Identity = 75/225 (33.33%), Postives = 107/225 (47.56%), Query Frame = 0 Query: 165 DPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPP----------------SLP----------RRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFGNA 363 DP CLC + H Y+++ S++G + +L VGPHW GV+ T+ ++ +++ +F+S + + L+ G+TL L +T C DPG++ LP RR+YC IC + T HCEDCGVC+ G DHHCPWMG C+G GNM AF FN W+ YV FVL +A S +G+A Sbjct: 63 DPLSCLC----CCKFKRLGHSYILH--ERRVVSAIGATET----------KLLIVGPHWIGVLVTLGIILVSTSMFLSQHVKTMKWYETLITLGLCGMTLYYLFQTTCTDPGIVRHKQKEVSQTEDENEVAELEAGQLPTEAFGSRRPSRRRYCDICGIDQDRTTDHCEDCGVCVAGFDHHCPWMGKCIGRGNMYAFKMFNVSWVVYVCFVLF-IAITSVDWGHA 270
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|813232273|ref|XP_012213165.1| (hypothetical protein SPRG_18337 [Saprolegnia parasitica CBS 223.65] >gi|641519306|gb|KDO16126.1| hypothetical protein SPRG_18337 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 124.405 bits (311), Expect = 7.154e-31 Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 0 Query: 219 VGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSV----PPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVL 350 VGPHW GV+ T L+ +++ LFI C L ++ L + T L +T C DPG++ R P + YC IC ++ HC+DCGVCIE DHHCPWMG C+G NM F FN W+ Y++FVL Sbjct: 3 VGPHWIGVLVTTGLIIVSTILFIGQQCAALDAWYTLASLAMATATCYFLFQTTCTDPGIVARGTTQTDPAIIATCSYCDICDVHQFRGTEHCDDCGVCIEKYDHHCPWMGKCIGKKNMKWFQLFNLAWIVYLVFVL 138
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|1173949180|gb|OQR97248.1| (dhhc zinc finger domain-containing protein [Achlya hypogyna]) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-30 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 0 Query: 219 VGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLI----TRSVPPSLPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVL 350 VGPHW GV+ T+ L+ ++ LFI C L ++ + + T L +T C DPG++ T++ P + YC IC ++ HC+DCGVCIE DHHCPWMG C+G NM F FN W+ Y++FVL Sbjct: 101 VGPHWIGVLVTLSLILASTILFIGQQCAELEAWYTVASLGMASATTYFLFKTTCTDPGIVPRGTTQTDPAVVATCSYCDICDVHQFRGTEHCDDCGVCIEKYDHHCPWMGKCIGKKNMKWFQLFNLAWILYLVFVL 236
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|566012840|gb|ETI35751.1| (hypothetical protein F443_17971 [Phytophthora parasitica P1569] >gi|570940289|gb|ETP05546.1| hypothetical protein F441_17839 [Phytophthora parasitica CJ01A1] >gi|570970559|gb|ETP33678.1| hypothetical protein F442_17813 [Phytophthora parasitica P10297]) HSP 1 Score: 120.553 bits (301), Expect = 5.534e-28 Identity = 70/221 (31.67%), Postives = 99/221 (44.80%), Query Frame = 0 Query: 165 DPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLI----------------------------------TRSVPPSLP-RRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVL 350 DP CLC + H Y+++ +G + + + +L VGPHW GV+ TV ++ +++ +F+S + + L+ +TL L +T C DPG+I + P P RR+YC IC + + HCEDCGVCI G DHHCPWMG C+G NM AF FN W+ YV FVL Sbjct: 59 DPLSCLCCC----KFKRLGHSYILH------ERRVGSADGTKT-------KLVIVGPHWIGVLVTVGIILVSTAMFLSQHVETMAWYNTLITLGLCSVTLYYLFQTTCTDPGIIRPPRQKDVSQTEDESEGMELEAGQAPVVEGAMLPAEAFGPRRPSRRRYCDICGIEQDRSTDHCEDCGVCIAGYDHHCPWMGKCIGRDNMHAFKMFNVAWVVYVCFVL 262
BLAST of EWM21418.1 vs. NCBI_GenBank
Match: gi|675175197|ref|XP_008896483.1| (hypothetical protein PPTG_04344 [Phytophthora parasitica INRA-310] >gi|568104222|gb|ETN18879.1| hypothetical protein PPTG_04344 [Phytophthora parasitica INRA-310]) HSP 1 Score: 120.553 bits (301), Expect = 6.458e-28 Identity = 70/221 (31.67%), Postives = 99/221 (44.80%), Query Frame = 0 Query: 165 DPFECLCNLINMPRVPAARHHYLIYLSPPPPSSSLGPSPPSSSCPPPPGGRLYTVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLI----------------------------------TRSVPPSLP-RRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVL 350 DP CLC + H Y+++ +G + + + +L VGPHW GV+ TV ++ +++ +F+S + + L+ +TL L +T C DPG+I + P P RR+YC IC + + HCEDCGVCI G DHHCPWMG C+G NM AF FN W+ YV FVL Sbjct: 59 DPLSCLCCC----KFKRLGHSYILH------ERRVGSADGTKT-------KLVIVGPHWIGVLVTVGIILVSTAMFLSQHVETMAWYNTLITLGLCSVTLYYLFQTTCTDPGIIRPPRQKDVSQTEDESEGMELEAGQAPVVEGAMLPAEAFGPRRPSRRRYCDICGIEQDRSTDHCEDCGVCIAGYDHHCPWMGKCIGRDNMHAFKMFNVAWVVYVCFVL 262 The following BLAST results are available for this feature:
BLAST of EWM21418.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|