EWM21422.1, cds9243 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|585101650|gb|EWM21422.1| (ring finger protein 10 [Nannochloropsis gaditana]) HSP 1 Score: 825.469 bits (2131), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query: 1 MDDVSSAREDKACPSSPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDRWEEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKSDPPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG 424
MDDVSSAREDKACPSSPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDRWEEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKSDPPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG
Sbjct: 1 MDDVSSAREDKACPSSPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDRWEEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKSDPPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG 424
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|553190931|ref|XP_005855295.1| (hypothetical protein NGA_0127100 [Nannochloropsis gaditana CCMP526] >gi|422293773|gb|EKU21073.1| hypothetical protein NGA_0127100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0 Identity = 356/371 (95.96%), Postives = 357/371 (96.23%), Query Frame = 0
Query: 54 MRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDRWEEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKSDPPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG 424
MRCLMAEAGGRHALLPQVVEGTV GRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDR EEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKS+PPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG
Sbjct: 1 MRCLMAEAGGRHALLPQVVEGTVFGGGDP-------GRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQPWEAARMVSGGDRREEAGEGEDGGKEGEKEGGVLSGSPSEERRALTSSFAEVIRKKGGAATTMLREEMFPALGGGGGGSPAPMSSSPPGRKSEPPPLSGAVPANGGTGGASGTGGSGGRDCSSPPSLRASAPPLGRVPEPGSGGEGGRGVWTGRTPFSVTSGTSSSLPERSEAGGMWQAGQASPGASIPPTASDGKEPPRPGKQPLQPHQQQKKKGKGGGKGIPIFSTGSQRSYG 364
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1173959799|gb|OQS05993.1| (hypothetical protein THRCLA_01935 [Thraustotheca clavata]) HSP 1 Score: 100.908 bits (250), Expect = 2.137e-19 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 16 SPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAV 158
SPS S ++GE + + FYQ+E+G FLHP+TMRCL E G LP + VLE E +V+ E R R+ FL HLP L EL L ++SP TL+ F+ ++KKR + R+ ++RAE E +R +E V
Sbjct: 287 SPSESF----IAGEESEGEVYSFYQVENGHTVFLHPITMRCLTKEFGD---FLPSSIAAKVLEIEHVVMNDENRKRFRFLSHLPSLCDFYLCELDLKD-IVSPETLQHFQGDLKKRTRARQAKKRAEANENRKRKDSIESRFV 421
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|298708832|emb|CBJ30791.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5153 bits (236), Expect = 2.157e-17 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 0
Query: 38 FYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGRRSSLTEEEIRRIQAQREKGVDLNGPQP 190
F+Q DGQ AFLHPL MR L+ +A R LP ++ VLE ET+ LTPELR R FL HLP++ + +E+ + L+L E RK RE ++RE RR+R V +EA R + L + RI A R VDL GP P
Sbjct: 560 FFQSVDGQKAFLHPLDMRQLLEDAE-RGLPLPPRIDAKVLEVETVKLTPELRKRLPFLGHLPIHCDISFLEVDM---------LDLVSDETS-----RKFREDTQKRERKRRSR-VAQEA-RLKKEEARLERDRADRIAAMRAFTVDLQGPTP 695
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1049283536|ref|XP_017538211.1| (PREDICTED: RING finger protein 10 isoform X2 [Pygocentrus nattereri]) HSP 1 Score: 94.3597 bits (233), Expect = 4.579e-17 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 0
Query: 37 HFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGR 163
+FYQ EDGQ FL P+ +RCL+ E G PQ + T++E E +T E+R R+ +L HLPL + EL L P +LS TL+ F E++KR R+++ R E+ RR R++E E ++ G+
Sbjct: 480 YFYQAEDGQQMFLQPVNVRCLLREYGSLENS-PQSITATIVEIEGHTVTEEMRRRHRYLSHLPLTCEYSICELNLQPPILSKETLDSFTDELEKRKCLRQKKARDEK----RRERKIEMEENQKQGK 601
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|938068064|gb|KPP67580.1| (RING finger protein 10-like [Scleropages formosus]) HSP 1 Score: 93.9745 bits (232), Expect = 5.710e-17 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query: 37 HFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQR 138
+FYQ EDGQ FLHP+ +RCLM E G A P TV+E + +T E+R R+ +L HLPL + ELALPP LLS TL+ F E++KR + R+++
Sbjct: 485 YFYQAEDGQQMFLHPVNVRCLMREYGSLEAS-PASFTATVVEIDGHTVTEEIRRRHRYLSHLPLTCEFSICELALPPPLLSKETLDTFSDELEKRRRLRQKK 585
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1049283534|ref|XP_017538210.1| (PREDICTED: RING finger protein 10 isoform X1 [Pygocentrus nattereri]) HSP 1 Score: 93.9745 bits (232), Expect = 5.733e-17 Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 0
Query: 37 HFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQRERAEEREAARRAREVEREAVREAGR 163
+FYQ EDGQ FL P+ +RCL+ E G PQ + T++E E +T E+R R+ +L HLPL + EL L P +LS TL+ F E++KR R+++ R E+ RR R++E E ++ G+
Sbjct: 480 YFYQAEDGQQMFLQPVNVRCLLREYGSLENS-PQSITATIVEIEGHTVTEEMRRRHRYLSHLPLTCEYSICELNLQPPILSKETLDSFTDELEKRKCLRQKKARDEK----RRERKIEMEENQKQGK 601
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1083277997|ref|XP_018587270.1| (PREDICTED: RING finger protein 10 [Scleropages formosus]) HSP 1 Score: 93.9745 bits (232), Expect = 6.409e-17 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query: 37 HFYQLEDGQLAFLHPLTMRCLMAEAGGRHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMKKRAQRRKQR 138
+FYQ EDGQ FLHP+ +RCLM E G A P TV+E + +T E+R R+ +L HLPL + ELALPP LLS TL+ F E++KR + R+++
Sbjct: 482 YFYQAEDGQQMFLHPVNVRCLMREYGSLEAS-PASFTATVVEIDGHTVTEEIRRRHRYLSHLPLTCEFSICELALPPPLLSKETLDTFSDELEKRRRLRQKK 582
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1205889383|gb|OWF40272.1| (RING finger protein 10 [Mizuhopecten yessoensis]) HSP 1 Score: 91.6633 bits (226), Expect = 3.335e-16 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 0
Query: 7 AREDKACPSSPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGG-RHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMK 129
A E PS P + PSS + G D+ A +FYQ EDGQ ++H L RCL+ E G +H P + T++E E + +T +LR R +L HLPL ++VELA+ P +LS TL+ F +++
Sbjct: 459 AAEHLEMPSHPEVA-SPSSRNSGGADN-AFYFYQAEDGQHIYMHALNARCLVKEYGALQHC--PDTITATIVEMENIFITEDLRKRLRYLGHLPLTCEFQVVELAIKPPVLSKDTLKFFSDDIE 578
BLAST of EWM21422.1 vs. NCBI_GenBank
Match: gi|1207968133|ref|XP_021374686.1| (RING finger protein 10-like [Mizuhopecten yessoensis]) HSP 1 Score: 91.6633 bits (226), Expect = 3.447e-16 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 0
Query: 7 AREDKACPSSPSASLGPSSLSGEGLDSQASHFYQLEDGQLAFLHPLTMRCLMAEAGG-RHALLPQVVEGTVLEAETLVLTPELRGRYGFLKHLPLYSSVKLVELALPPALLSPPTLELFKPEMK 129
A E PS P + PSS + G D+ A +FYQ EDGQ ++H L RCL+ E G +H P + T++E E + +T +LR R +L HLPL ++VELA+ P +LS TL+ F +++
Sbjct: 467 AAEHLEMPSHPEVA-SPSSRNSGGADN-AFYFYQAEDGQHIYMHALNARCLVKEYGALQHC--PDTITATIVEMENIFITEDLRKRLRYLGHLPLTCEFQVVELAIKPPVLSKDTLKFFSDDIE 586 The following BLAST results are available for this feature:
BLAST of EWM21422.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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