EWM21453.1, cds9233 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|585101683|gb|EWM21453.1| (hypothetical protein Naga_100019g4 [Nannochloropsis gaditana]) HSP 1 Score: 387.497 bits (994), Expect = 2.928e-136 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 Query: 1 MPISCLALAMTRITLTNSHARHALQTLRESTIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA 189 MPISCLALAMTRITLTNSHARHALQTLRESTIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA Sbjct: 1 MPISCLALAMTRITLTNSHARHALQTLRESTIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA 189
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|553185855|ref|XP_005854322.1| (hypothetical protein NGA_0208701 [Nannochloropsis gaditana CCMP526] >gi|553188713|ref|XP_005854850.1| hypothetical protein NGA_0208702 [Nannochloropsis gaditana CCMP526] >gi|422294204|gb|EKU21504.1| hypothetical protein NGA_0208702 [Nannochloropsis gaditana CCMP526] >gi|422294737|gb|EKU22037.1| hypothetical protein NGA_0208701 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 123.25 bits (308), Expect = 2.022e-32 Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 0 Query: 37 DDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA 189 DDK +++ WY +S+AYV+ A+ A+ ET FAAIWSML+L I+IGGT+ R++TP+ATGV LG M+SQ++L+LF IF ++ + E+ + A A FAFFL +++ VFS+ L +R Y+ + + +SYA Sbjct: 5 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 157
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|585112693|gb|EWM30061.1| (hypothetical protein Naga_100170g6 [Nannochloropsis gaditana]) HSP 1 Score: 123.25 bits (308), Expect = 4.332e-32 Identity = 61/153 (39.87%), Postives = 93/153 (60.78%), Query Frame = 0 Query: 37 DDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA 189 DDK +++ WY +S+AYV+ A+ A+ ET FAAIWSML+L I+IGGT+ R++TP+ATGV LG M+SQ++L+LF IF ++ + E+ + A A FAFFL +++ VFS+ L +R Y+ + + +SYA Sbjct: 41 DDKGRLLKLTWYTCMAVSVAYVIAALVLASRLSKSETPVATQPTAFAAIWSMLVLLAILIGGTLVFNRVQTPVATGVLLGCTAMFSQIELMLFTIFEAHSRDAVTASEKSAGQATATFAFFLAVIFGVFSIFLLMWRQYLHVGSSQSSMDSYA 193
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|635370030|emb|CCI41851.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 97.0561 bits (240), Expect = 8.729e-22 Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 0 Query: 33 KMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVG---LAQT-----SSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAEN 186 ++ ++ R ++ YLW+ ++ Y + AI AA + + + GFA IW+M+++ + +GGT+ M++ +TP+A G F+G IM S L +FVG LA+ + D +N A AVF+FF+F LY +F L R VI + P+ E Sbjct: 13 RLCGENPRLLVTYLWFSTLVVGFMYAITAIVAAVENSG-RNLSDSKSLGFAGIWAMILMIGLSVGGTLVMRKFQTPLAVGFFIGVVIMMSFQMFSLTVLFVGESYLAKEERTLFNKTDTNIHTNEAAAVFSFFMFTLYAIFGAVLVKHRSIVIREVPSTTEK 173
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|298710050|emb|CBJ31767.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.3521 bits (220), Expect = 1.773e-19 Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = 0 Query: 52 LLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVI-------DDAPAP 183 ++ +A++ +AA + D + + GFAA+W++L+L + +GG++ M++ +T +A G FLG I+ SQ L+LFA+F G A T+ E+ ++ A A F FFL+I+Y+ F+ L FR +I +D P P Sbjct: 1 MVMVAFICACASAAHSDGD-----GSASLGFAAVWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVIIMSQTMLVLFAVFAGRASTAEDVDEKPADRAFAAFCFFLWIVYSTFAGMLAVFREDIIMDDTTKYEDDPVP 134
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|325190846|emb|CCA25334.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 90.1225 bits (222), Expect = 1.500e-18 Identity = 55/168 (32.74%), Postives = 91/168 (54.17%), Query Frame = 0 Query: 24 LQTLRE--STIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAA--NQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVG---LAQT-----SSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDD 179 L T+ E ++ ++ R ++ YLW+ ++ Y + AI AA N +L + + + GFA IW+M+++ + +GGT+ M++ +TP+A G F+G IM S L +FVG LA+ ++ D +N A AVF+FF+F LY +F L R VI + Sbjct: 81 LPTIHEIKEKARLCGENPRLLVTYLWFSTLVVGFMYAITAIVAAVYNNGHNL---SDSKSLGFAGIWTMILMIGLSVGGTLVMRKYQTPLAVGFFIGVVIMMSFQMFSLTILFVGGSYLAKEERTLFNNTDTNIHTNQAAAVFSFFMFALYAIFGAVLVKHRSIVIKE 245
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|325189148|emb|CCA23673.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 90.1225 bits (222), Expect = 1.750e-18 Identity = 55/168 (32.74%), Postives = 91/168 (54.17%), Query Frame = 0 Query: 24 LQTLRE--STIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAA--NQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVG---LAQT-----SSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDD 179 L T+ E ++ ++ R ++ YLW+ ++ Y + AI AA N +L + + + GFA IW+M+++ + +GGT+ M++ +TP+A G F+G IM S L +FVG LA+ ++ D +N A AVF+FF+F LY +F L R VI + Sbjct: 91 LPTIHEIKEKARLCGENPRLLVTYLWFSTLVVGFMYAITAIVAAVYNNGHNL---SDSKSLGFAGIWTMILMIGLSVGGTLVMRKYQTPLAVGFFIGVVIMMSFQMFSLTILFVGGSYLAKEERTLFNNTDTNIHTNQAAAVFSFFMFALYAIFGAVLVKHRSIVIKE 255
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|695391610|ref|XP_009520078.1| (hypothetical protein PHYSODRAFT_484403 [Phytophthora sojae] >gi|348684975|gb|EGZ24790.1| hypothetical protein PHYSODRAFT_484403 [Phytophthora sojae]) HSP 1 Score: 86.2705 bits (212), Expect = 1.629e-17 Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = 0 Query: 30 STIKMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLA-----QTSSGD--VERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDA 180 S + ++ + +I YLW+ L Y + AI AA D E + + + GF +W+M+++ + +GGT+ M++ +TP+A G +G +M S L IF G A + + GD SN A +VF+FF+FILY VF++ L R+ VI + Sbjct: 6 SKARKCINNPKMLITYLWFSTMLFGFMYAIAAIVAAV-NNDGEGESDSKSLGFVGVWAMILIVALSVGGTMVMRKHQTPLAVGFLIGVVLMMSLQMFSLSIIFAGAAYLARIERAKGDEHTNVHSNEAGSVFSFFMFILYAVFAIVLVRHRNIVIKEG 162
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|698786974|ref|XP_009826519.1| (hypothetical protein H257_03912 [Aphanomyces astaci] >gi|698786976|ref|XP_009826520.1| hypothetical protein, variant [Aphanomyces astaci] >gi|574119347|gb|ETV84827.1| hypothetical protein H257_03912 [Aphanomyces astaci] >gi|574119348|gb|ETV84828.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 85.5001 bits (210), Expect = 2.554e-17 Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 33 KMVCDDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLA----QTSSGDVER-------RSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDA 180 K C + + VI YLW++ ++ + + A+ AAN + + + GFA IW M ++ + IGGT+ M++ +TPIA G F+G IM S L + G A ++++G + S+ A AVF+FF+F+LY F+V L R +I D Sbjct: 12 KACCANPKLVITYLWFIILFFAVMFSLGAMVFAANNNG-DGPQYSKSLGFAGIWMMFLVIALSIGGTMVMRKYQTPIAVGFFIGVVIMMSFNMFSLSVLCAGAAYLAKRSNNGTLNDGNWKGPVHSDEASAVFSFFMFVLYFAFAVVLVKHRAVIIKDG 169
BLAST of EWM21453.1 vs. NCBI_GenBank
Match: gi|675202041|ref|XP_008909905.1| (hypothetical protein PPTG_14695 [Phytophthora parasitica INRA-310] >gi|567996913|gb|ETL47009.1| hypothetical protein L916_03204 [Phytophthora parasitica] >gi|568026111|gb|ETM00108.1| hypothetical protein L917_03137 [Phytophthora parasitica] >gi|568090131|gb|ETN04968.1| hypothetical protein PPTG_14695 [Phytophthora parasitica INRA-310] >gi|570994409|gb|ETP51545.1| hypothetical protein F442_03341 [Phytophthora parasitica P10297]) HSP 1 Score: 82.8037 bits (203), Expect = 3.185e-16 Identity = 48/151 (31.79%), Postives = 82/151 (54.30%), Query Frame = 0 Query: 37 DDKRKVIAYLWYLNALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTITMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLA-----QTSSGD--VERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDA 180 ++ + +I YLW++ L Y + AI AA D E + + + GF +W+M+++ + +GGT+ M++ +TP+A G +G +M S L IF G A + + GD SN A +VF+FF+F+ Y F++ L R+ VI + Sbjct: 17 NNPKMLITYLWFVTMLFGFMYAIAAIVAAV-NNDGEGESDSKSLGFVGVWAMILIIALSVGGTMVMRKHQTPLAVGFLIGVVLMMSLQMFSLSIIFAGAAYLARIERAKGDEHTNVHSNEAGSVFSFFMFVCYLAFTIVLVRHRNIVIKEG 166 The following BLAST results are available for this feature:
BLAST of EWM21453.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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