EWM21458.1, cds9200 (CDS) Nannochloropsis gaditana

Overview
NameEWM21458.1
Unique Namecds9200
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:164212..165396 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21458.1
Productfarnesyl pyrophosphate synthase
Orig transcript idgnl|cribi|Naga_100019g42.480.mrna
GeneFPPS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:164212..165396 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Homology
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|585101688|gb|EWM21458.1| (farnesyl pyrophosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
Query:    1 MSGKSMAIGLAAGFLLSAALLYPRVRSKTRTSKTEPDTDLSYPSSLPPDEKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            MSGKSMAIGLAAGFLLSAALLYPRVRSKTRTSKTEPDTDLSYPSSLPPDEKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK
Sbjct:    1 MSGKSMAIGLAAGFLLSAALLYPRVRSKTRTSKTEPDTDLSYPSSLPPDEKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|669163514|ref|XP_008617319.1| (hypothetical protein SDRG_13014 [Saprolegnia diclina VS20] >gi|530730899|gb|EQC29141.1| hypothetical protein SDRG_13014 [Saprolegnia diclina VS20])

HSP 1 Score: 432.95 bits (1112), Expect = 2.870e-148
Identity = 198/344 (57.56%), Postives = 265/344 (77.03%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRS 393
            E + FI+IC +L  E+LT +K++Y +P EA +WV +MI+YN  GGKLNRG++V+     +   KG     R+  +AA+LGWCIEWLQAFFLVADDVMDDS+TRRGQPCW+R+P+VK IA+ND+F+LES V+QILK HF  E +Y+ L + F+EV  QTELGQLLDLTSQP+DG  +L RFT +R+Q IV +KTA+YTFYL  A  + LSG+  PA  T A+ +CV +GEYFQVQDDYLDCY DP+++GK+GTDIQDNKCSWLVVQALA+ATP QR V++ HYGK+ ++S+A +K LY  + LE ++++YE +SY  + K + A+  ++P  VF +LL KIY+R+
Sbjct:    9 EIDEFIKICYELKEEVLTTMKTKYTMPQEAIDWVNEMIDYNCIGGKLNRGISVIHCAEALTQGKGLTPEARK--KAAILGWCIEWLQAFFLVADDVMDDSITRRGQPCWYRIPKVKQIAINDAFLLESFVYQILKTHFRGESYYLDLVETFQEVIFQTELGQLLDLTSQPLDGPTNLDRFTIERHQKIVVFKTAYYTFYLSAASAMFLSGVSDPACYTLAQEICVKIGEYFQVQDDYLDCYADPEVLGKIGTDIQDNKCSWLVVQALARATPEQRAVIKEHYGKNNEASIAVIKALYVSLDLEGVYRKYENESYDELCKLIGAVN-NMPATVFHMLLSKIYKRT 349          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|813184842|ref|XP_012206593.1| (hypothetical protein SPRG_10991 [Saprolegnia parasitica CBS 223.65] >gi|641528452|gb|KDO22676.1| hypothetical protein SPRG_10991 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 432.565 bits (1111), Expect = 4.207e-148
Identity = 198/344 (57.56%), Postives = 265/344 (77.03%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRS 393
            E + FI+IC +L  E+LT +K++Y +P EA +WV +MI+YN  GGKLNRG++V+     +   KG     R+  +AA+LGWCIEWLQAFFLVADDVMDDS+TRRGQPCW+R+P+VK IA+ND+F+LES V+QILK HF  E +Y+ L + F+EV  QTELGQLLDLTSQP+DG  +L RFT +R+Q IV +KTA+YTFYL  A  + LSG+  PA  T A+ +CV +GEYFQVQDDYLDCY DP+++GK+GTDIQDNKCSWLVVQALA+ATP QR V++ HYGK+ ++S+A +K LY  + LE ++++YE +SY  + K + A+  ++P  VF +LL KIY+R+
Sbjct:    9 EIDEFIKICYELKEEVLTTMKTKYTMPQEAIDWVNEMIDYNCIGGKLNRGISVIHCAEALTQGKGLTPEARK--KAAILGWCIEWLQAFFLVADDVMDDSITRRGQPCWYRIPKVKQIAINDAFLLESFVYQILKTHFRGESYYLDLVETFQEVIFQTELGQLLDLTSQPLDGPTNLDRFTIERHQKIVVFKTAYYTFYLSAASAMFLSGVSDPACYTLAQEICVKIGEYFQVQDDYLDCYADPEVLGKIGTDIQDNKCSWLVVQALARATPEQRAVIKEHYGKNNEASIAVIKALYVTLDLEGVYRKYENESYDELCKLIGAVN-NMPATVFHMLLSKIYKRT 349          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|1173944677|gb|OQR93384.1| (farnesyl pyrophosphate synthetase [Achlya hypogyna])

HSP 1 Score: 431.409 bits (1108), Expect = 8.558e-148
Identity = 198/344 (57.56%), Postives = 263/344 (76.45%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRS 393
            E + FI+IC +L  E+L  +K++Y +P EA +WV +MI+YN  GGKLNRG++V+     +   KG     R+  +AA+LGWCIEWLQAFFLVADDVMDDS+TRRGQPCW+R+P+VK IA+ND+F+LES V+QILK HF  E +Y+ L + F+EV  QTELGQLLDLTSQP+DG  +L RFT +R+Q IV +KTA+YTFYL  A  + LSG+  PA  + A+ +CV +GEYFQVQDDYLDCY DPK++GK+GTDIQDNKCSWLVVQALA+ATP QR V++ HYGK+ ++S+A +K LY  + LE ++++YE  SY  + K L A  +++P  VF +LL KIY+R+
Sbjct:    9 EIDDFIKICYELKEEVLATMKNKYTMPQEAIDWVNEMIDYNCIGGKLNRGISVIHCAEALTEGKGLTPEARK--KAAILGWCIEWLQAFFLVADDVMDDSITRRGQPCWYRIPKVKQIAINDAFLLESFVYQILKTHFRGESYYLDLVETFQEVIFQTELGQLLDLTSQPLDGPTNLDRFTIERHQKIVVFKTAYYTFYLSAASAMFLSGVKDPACYSLAQEICVKIGEYFQVQDDYLDCYADPKVLGKIGTDIQDNKCSWLVVQALARATPEQRAVIKEHYGKNNEASIATIKALYVTLDLEAVYRKYENDSYDELCK-LIAAVSNMPATVFHMLLNKIYKRT 349          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|219127608|ref|XP_002184024.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404747|gb|EEC44693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 422.55 bits (1085), Expect = 2.315e-144
Identity = 205/322 (63.66%), Postives = 249/322 (77.33%), Query Frame = 0
Query:   78 EASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQP-----MDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            EA +++++M++YNV GGKLNRG TV+ V R +       L+  E ARAAVLGW IE+LQAFFLVADDVMDDS TRRGQPCW++LP V+L+A+NDSF+LES VF IL+RHFGHEPFY+ L +L  +VT +TELGQLLDLTSQP         +DL RFT  RYQ IVKYKTAFY+FYLP+A G+ILSG+    AL  AR +C LMGEYFQ+QDDYLDC+GDP +IGKVGTDIQDNKCSWLVVQALA+ TPAQR VL+ HYG+ +D  V  VK+LYRE+ L  +F  YEE SY  IQ +L+ + A +P+ VF L L KIY+RSK
Sbjct:   25 EAIDYLRRMMDYNVPGGKLNRGTTVIDVYRVLLGKA--TLTPTETARAAVLGWAIEFLQAFFLVADDVMDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRHFGHEPFYLHLLELMLDVTHKTELGQLLDLTSQPPQHHDQPHHVDLDRFTLTRYQQIVKYKTAFYSFYLPVAMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGDPAVIGKVGTDIQDNKCSWLVVQALARCTPAQRDVLQNHYGQSDDQKVETVKSLYRELQLVEVFHAYEEDSYAQIQAQLEQVHA-VPKQVFVLFLNKIYKRSK 343          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|299115584|emb|CBN75787.1| (Farnesyl pyrophosphate synthase [Ectocarpus siliculosus])

HSP 1 Score: 427.172 bits (1097), Expect = 6.776e-144
Identity = 201/354 (56.78%), Postives = 266/354 (75.14%), Query Frame = 0
Query:   42 YPSSLPPDEKEAFIEICDQLTVELLTELKSRYE-LPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            YP  LP D K++F  +   L  EL+ ++   YE +PA+  +W+++ +EYN KGGK+NRG+ VV V R    A GR L   E  R ++LGWC+EWLQAFFLVADDVMD S+TRRGQPCW+++P+V+ IA+NDSFILE++VF++LKRHF HE +Y+ L +LF +VT +TE+GQLLDLTSQPMD   DL RFTP RY++IV+YKTA+YTFYLP A G+I +G+  PA+   AR +C  +GE+FQ+QDDYLDC+GDP++IGKVGTDIQDNKCSWLVVQAL +A+ AQ+ VL  +Y   E++ +  VK LYRE+ LE ++ +YEE ++  I KEL A   DIP  VF   + KIY+RSK
Sbjct:  148 YPRELPGDPKKSFEAMHKFLVEELVADVADNYEGIPAQL-DWIQENLEYNTKGGKMNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASKAQKAVLIQNYAIDEEAKIERVKELYRELKLEKVYAKYEEDTHKQI-KELIAKVEDIPHAVFHQFIDKIYKRSK 499          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|673035386|ref|XP_008871654.1| (hypothetical protein H310_07913 [Aphanomyces invadans] >gi|574472874|gb|ETV99878.1| hypothetical protein H310_07913 [Aphanomyces invadans])

HSP 1 Score: 421.394 bits (1082), Expect = 8.004e-144
Identity = 188/344 (54.65%), Postives = 258/344 (75.00%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRS 393
            E + F+EIC +L  E+L  +  +Y +P EA EWV  MI+YN  GGK+NRG++V+     +   KG     R+  +AA+LGWCIEWLQAFFLVADDVMD+S+TRRGQPCWFR+P+VK IA+ND+F+LES V+ IL+ HF  E +Y+ L +LF+EV LQTE GQLLDLTSQP+DG  +L RFT +R+Q IV +KTA+YTFYL  AC + +SG+  PA  +  + +CV +GEYFQVQDDYLDCY DPK++GK+GTDIQDNKCSWLVVQAL++ T AQR +++ HYGK+ ++S+  +K LY ++ LE +++ YE  SY  + K ++ +  ++P  V+ +LL KIY+R+
Sbjct:   10 EIQEFVEICHELKREVLNVMTKKYTMPTEAVEWVNDMIDYNCIGGKMNRGISVIHCAEALTQGKGLTPEARK--KAAILGWCIEWLQAFFLVADDVMDESITRRGQPCWFRVPKVKQIAINDAFLLESFVYSILRTHFRSETYYIDLVELFQEVILQTEFGQLLDLTSQPLDGPTNLDRFTIERHQKIVVFKTAYYTFYLSAACAMHISGVTDPACYSQCQDICVKIGEYFQVQDDYLDCYADPKVLGKIGTDIQDNKCSWLVVQALSRGTEAQRAIIKEHYGKNNEASIQIIKDLYVQLDLEAVYRAYENDSYDELCKLINGV-TNMPTTVYHMLLSKIYKRT 350          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|821563234|gb|AKH49589.1| (farnesyl pyrophosphate synthase [Rhizosolenia setigera])

HSP 1 Score: 423.32 bits (1087), Expect = 2.425e-143
Identity = 200/346 (57.80%), Postives = 261/346 (75.43%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQI-DLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            +KE F+ +   L   +     +++E+  E   W+ +MI+Y+  GGK+NRG+TV++V RT+  + G  L+ RE ARA+V+GW IE+LQAFFLVADD+MDDS TRRGQPCW+ LP+V  IAVNDSF+LES VF  LK HFG EP+Y+ L +LF E   QTE GQLLDLTSQP D +  DL RFT +RY+ IVKYKTAFY+FYLP+A  +++SG+ +  +  TAR +C +MGEYFQ+QDD LDCYG P++IGKVGTDIQDNKCSWL+VQAL +ATP QR V+E +YGK +D+ VA +K +Y EMGL+ +F++YEE SY  IQ+EL  +  DIP+ VF L L KIY+RSK
Sbjct:   90 DKEKFLSVYPCLRDSIAEYFATKHEMVPEGVNWITEMIDYSCVGGKMNRGITVLTVARTLSGSSG--LTPREEARASVVGWGIEFLQAFFLVADDLMDDSKTRRGQPCWYLLPKVGTIAVNDSFLLESFVFTFLKEHFGKEPYYIKLVELFLETIQQTECGQLLDLTSQPKDAKTADLSRFTIERYRKIVKYKTAFYSFYLPVASAMLMSGVTNSKSFKTARNICCIMGEYFQIQDDVLDCYGTPEVIGKVGTDIQDNKCSWLIVQALDRATPEQRKVIEENYGKWDDAKVAKIKAIYNEMGLKSVFEKYEEDSYAEIQEELKKI-NDIPQEVFTLFLDKIYKRSK 432          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|695389035|ref|XP_009519331.1| (hypothetical protein PHYSODRAFT_556668 [Phytophthora sojae] >gi|348684228|gb|EGZ24043.1| hypothetical protein PHYSODRAFT_556668 [Phytophthora sojae])

HSP 1 Score: 414.461 bits (1064), Expect = 4.647e-141
Identity = 189/345 (54.78%), Postives = 266/345 (77.10%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            E+E F+ +C +L +E+L  L+++++LP EA +WV +++EYN  GGKLNRG++VV   + +  A G+VL++    +A+VLGWCIEWLQAFFLVADD+MD+S+TRRGQPCW+R P VK+IA+ND+F+LE+ VFQILK+HF  EP+Y+ L D F +V   TE+GQLLDLTSQP+DG +DL RFT +RY+ IV  KTA+YTFYL  AC + L+G+    +   A+++CV +GEYFQ+QDD+LDCYGD  +IGKVGTDIQDNKCSWLVVQAL +ATP QR  L+ +YG+++  ++AAVK LY E+ L  ++ +YE+++Y  + +E+ A    +P  VF LL+ KI++R+K
Sbjct:    4 EREEFVAVCGKLKLEVLELLRTKHQLPQEALDWVDEVVEYNCIGGKLNRGISVVHCTQAM--APGKVLTSEMKEKASVLGWCIEWLQAFFLVADDIMDESITRRGQPCWYRKPNVKMIAINDAFLLEAFVFQILKKHFRSEPYYLDLVDTFHDVVFHTEIGQLLDLTSQPLDGDVDLDRFTVERYRQIVINKTAYYTFYLSAACAMFLNGVVDEPSHNLAKKICVQIGEYFQIQDDFLDCYGDENVIGKVGTDIQDNKCSWLVVQALDRATPEQRETLKTNYGRNDSDAIAAVKKLYNELDLAAVYHRYEDETYKTLSEEI-AQVTMMPSEVFTLLVSKIFKRNK 345          
BLAST of EWM21458.1 vs. NCBI_GenBank
Match: gi|567993230|gb|ETL43413.1| (hypothetical protein L916_06069 [Phytophthora parasitica] >gi|570330906|gb|ETO78854.1| hypothetical protein F444_06317 [Phytophthora parasitica P1976])

HSP 1 Score: 410.223 bits (1053), Expect = 2.122e-139
Identity = 188/345 (54.49%), Postives = 267/345 (77.39%), Query Frame = 0
Query:   50 EKEAFIEICDQLTVELLTELKSRYELPAEASEWVKKMIEYNVKGGKLNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSVAAVKTLYREMGLEVLFKQYEEQSYTAIQKELDALPADIPRPVFELLLKKIYRRSK 394
            E+E FI +C +L +E+L  L+++++LP +A +WV +++EYN  GGKLNRG++VV   + +  A G+ L++    +A+VLGWCIEWLQAFFLVADD+MD+S+TRRGQPCW+R P VK+IA+ND+F+LE+ VFQILK+HF  EP+Y+ L + F +V   TE+GQLLDLTSQP+DG++DL RFT +RY+ IV  KTA+YTFYL  AC + L+G+   A+   A+++CV +GEYFQ+QDD+LDCYGD K+IGKVGTDIQDNKCSWLVVQAL +ATP QR  L+ +YG+++  ++A VK LY E+ L  ++ +YE+++Y  + +E+ A    +P  VF LL+ KI++R+K
Sbjct:    4 EREEFIAVCGKLKLEVLELLRTKHQLPQDALDWVDEVVEYNCIGGKLNRGISVVHCTQAM--APGKELTSELKEKASVLGWCIEWLQAFFLVADDIMDESITRRGQPCWYRKPNVKMIAINDAFLLEAFVFQILKKHFRSEPYYLDLVETFHDVVFHTEIGQLLDLTSQPLDGEVDLDRFTVERYRQIVINKTAYYTFYLSAACAMFLNGVVDEASHNLAKKICVRIGEYFQIQDDFLDCYGDEKVIGKVGTDIQDNKCSWLVVQALDRATPEQRETLKKNYGRNDPDAIAVVKKLYNELELATVYHRYEDETYKTLSEEI-AQVTIMPSEVFNLLVSKIFKRNK 345          
The following BLAST results are available for this feature:
BLAST of EWM21458.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101688|gb|EWM21458.1|0.000e+0100.00farnesyl pyrophosphate synthase [Nannochloropsis g... [more]
gi|669163514|ref|XP_008617319.1|2.870e-14857.56hypothetical protein SDRG_13014 [Saprolegnia dicli... [more]
gi|813184842|ref|XP_012206593.1|4.207e-14857.56hypothetical protein SPRG_10991 [Saprolegnia paras... [more]
gi|1173944677|gb|OQR93384.1|8.558e-14857.56farnesyl pyrophosphate synthetase [Achlya hypogyna... [more]
gi|219127608|ref|XP_002184024.1|2.315e-14463.66predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|299115584|emb|CBN75787.1|6.776e-14456.78Farnesyl pyrophosphate synthase [Ectocarpus silicu... [more]
gi|673035386|ref|XP_008871654.1|8.004e-14454.65hypothetical protein H310_07913 [Aphanomyces invad... [more]
gi|821563234|gb|AKH49589.1|2.425e-14357.80farnesyl pyrophosphate synthase [Rhizosolenia seti... [more]
gi|695389035|ref|XP_009519331.1|4.647e-14154.78hypothetical protein PHYSODRAFT_556668 [Phytophtho... [more]
gi|567993230|gb|ETL43413.1|2.122e-13954.49hypothetical protein L916_06069 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9230rna9230Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications