EWM21471.1, cds9186 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|553196113|ref|XP_005856272.1| (dhhc zinc finger domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422292786|gb|EKU20088.1| dhhc zinc finger domain containing protein [Nannochloropsis gaditana CCMP526] >gi|585101701|gb|EWM21471.1| dhhc zinc finger domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query: 1 MPVLDAEPIERACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNTFHKGERL 258
MPVLDAEPIERACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNTFHKGERL
Sbjct: 1 MPVLDAEPIERACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNTFHKGERL 258
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|675196115|ref|XP_008906942.1| (hypothetical protein PPTG_12999 [Phytophthora parasitica INRA-310] >gi|566021403|gb|ETI44314.1| hypothetical protein F443_10979 [Phytophthora parasitica P1569] >gi|568056457|gb|ETM53169.1| hypothetical protein L914_03340 [Phytophthora parasitica] >gi|568092856|gb|ETN07657.1| hypothetical protein PPTG_12999 [Phytophthora parasitica INRA-310] >gi|570325019|gb|ETO72967.1| hypothetical protein F444_11048 [Phytophthora parasitica P1976] >gi|570981894|gb|ETP42194.1| hypothetical protein F442_10873 [Phytophthora parasitica P10297]) HSP 1 Score: 138.272 bits (347), Expect = 8.409e-37 Identity = 84/247 (34.01%), Postives = 124/247 (50.20%), Query Frame = 0
Query: 5 DAEPIERACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCG--RKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFL---ILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
DAE R + + + TNG+C +GR +LC R+ G FP C VGP W CML+TY + P+ FF +L+ +V+ V+ S LT F++ ACSDPG+VF L + D E+G I C++CE+ RP+ ASHC +C VCV++LDHHCPWTGKC+G + +++FY+FLTF+++H + +G+V +T
Sbjct: 4 DAELSARQGEEVEPTAKYTPSTRTNGRCCVR---VGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFFFADDMLLGLKVALVV------SICLTTASFTMVACSDPGVVFQDLEVANALQG-DVETG-------------------------------------------IICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAVCLVT 197
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|567958736|gb|ETK84322.1| (hypothetical protein L915_10701 [Phytophthora parasitica] >gi|567987457|gb|ETL37761.1| hypothetical protein L916_10592 [Phytophthora parasitica] >gi|570948871|gb|ETP14128.1| hypothetical protein F441_10898 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 137.502 bits (345), Expect = 1.710e-36 Identity = 84/247 (34.01%), Postives = 124/247 (50.20%), Query Frame = 0
Query: 5 DAEPIERACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCG--RKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFL---ILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
DAE R + + + TNG+C +GR +LC R+ G FP C VGP W CML+TY + P+ FF +L+ +V+ V+ S LT F++ ACSDPG+VF L + D E+G I C++CE+ RP+ ASHC +C VCV++LDHHCPWTGKC+G + +++FY+FLTF+++H + +G+V +T
Sbjct: 4 DAELSARQGEEVEPTAKYTPSTRTNGRCCVR---VGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFFFADDMLLGLKVALVV------SICLTTASFTMVACSDPGVVFQDLEVANPLQG-DVETG-------------------------------------------IICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAVCLVT 197
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|568016727|gb|ETL90904.1| (hypothetical protein L917_10498 [Phytophthora parasitica]) HSP 1 Score: 134.806 bits (338), Expect = 1.531e-35 Identity = 76/213 (35.68%), Postives = 112/213 (52.58%), Query Frame = 0
Query: 39 IGRMILLCG--RKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFL---ILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
+GR +LC R+ G FP C VGP W CML+TY + P+ FF +L+ +V+ V+ S LT F++ ACSDPG+VF L + D E+G I C++CE+ RP+ ASHC +C VCV++LDHHCPWTGKC+G + +++FY+FLTF+++H + +G+V +T
Sbjct: 35 VGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFFFADDMLLGLKVALVV------SICLTTASFTMVACSDPGVVFQDLEVANALQG-DVETG-------------------------------------------IICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAVCLVT 197
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|669151634|ref|XP_008611379.1| (hypothetical protein SDRG_07329 [Saprolegnia diclina VS20] >gi|530736853|gb|EQC35095.1| hypothetical protein SDRG_07329 [Saprolegnia diclina VS20]) HSP 1 Score: 126.716 bits (317), Expect = 2.427e-32 Identity = 70/199 (35.18%), Postives = 99/199 (49.75%), Query Frame = 0
Query: 53 FPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNT 251
FP C VGP+WPCM T+ ++ PS F+ +++ ++ V + S +LT F++ ACSDPGI+ E ++P A +G + C+ C + RP A HCYECEVC+ LDHHCPWTGKCIG++ L++FYLFLT +T+H+ F SV I T
Sbjct: 57 FPSVCHVGPNWPCMTFTFALILAPS--FICSFDRNITAWVIAVLVLSIVLTFLSFAMVACSDPGII--------REDYVNP------------------------------AGEDEG----------VLCAHCRIRRPANAVHCYECEVCIDGLDHHCPWTGKCIGKRTLKWFYLFLTMITLHLTFSISVLVYYIIRGT 205
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|635362165|emb|CCI49022.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 125.946 bits (315), Expect = 1.646e-31 Identity = 80/215 (37.21%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 39 IGRMILLCGRKDGI---FPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLA---SFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQ-IPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
IG +LC G FP C +GPD ML+TYT++ P I + +S+ + A + LTL FS+TACSDPG++F EER N S+ P T L A + S PV + I C+ C +SRP+ ASHCY+C C+ +LDHHCPWTGKCIG++ L +FY FL +T H++ A T
Sbjct: 59 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIF-------EERK----------------NISLEVYTPGSPPVTLLTAPME---SEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLVVAAITIAYT 247
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|813131727|ref|XP_012197712.1| (hypothetical protein SPRG_03753 [Saprolegnia parasitica CBS 223.65] >gi|641537989|gb|KDO31833.1| hypothetical protein SPRG_03753 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 124.405 bits (311), Expect = 1.974e-31 Identity = 70/205 (34.15%), Postives = 100/205 (48.78%), Query Frame = 0
Query: 47 GRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNT 251
G FP C VGP+WPCM T+ ++ PS F+ + ++ ++ V + S +LT F++ ACSDPGI+ E ++P G +G + C+ C + RP A HCYEC+VC+ LDHHCPWTGKCIG++ L++FYLFLT +T+H+ F SV I T
Sbjct: 51 GATATAFPSVCHVGPNWPCMTFTFALILAPS--FICSLDRNIAPWVIAVLVLSVVLTFISFAMVACSDPGII--------REDHVNPAGG------------------------------DEG----------VLCAHCRIRRPADAVHCYECDVCIDGLDHHCPWTGKCIGKRTLKWFYLFLTTITLHLTFSISVLVYYIIRGT 205
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|635362164|emb|CCI49021.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 125.946 bits (315), Expect = 2.053e-31 Identity = 80/215 (37.21%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 39 IGRMILLCGRKDGI---FPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLA---SFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQ-IPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
IG +LC G FP C +GPD ML+TYT++ P I + +S+ + A + LTL FS+TACSDPG++F EER N S+ P T L A + S PV + I C+ C +SRP+ ASHCY+C C+ +LDHHCPWTGKCIG++ L +FY FL +T H++ A T
Sbjct: 65 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIF-------EERK----------------NISLEVYTPGSPPVTLLTAPME---SEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLVVAAITIAYT 253
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|635362166|emb|CCI49023.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 124.405 bits (311), Expect = 2.434e-31 Identity = 80/215 (37.21%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 39 IGRMILLCGRKDGI---FPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLA---SFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQ-IPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMT 246
IG +LC G FP C +GPD ML+TYT++ P I + +S+ + A + LTL FS+TACSDPG++F EER N S+ P T L A + S PV + I C+ C +SRP+ ASHCY+C C+ +LDHHCPWTGKCIG++ L +FY FL +T H++ A T
Sbjct: 29 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIF-------EERK----------------NISLEVYTPGSPPVTLLTAPME---SEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLVVAAITIAYT 217
BLAST of EWM21471.1 vs. NCBI_GenBank
Match: gi|698800152|ref|XP_009833105.1| (hypothetical protein H257_08764 [Aphanomyces astaci] >gi|574111824|gb|ETV77318.1| hypothetical protein H257_08764 [Aphanomyces astaci]) HSP 1 Score: 118.627 bits (296), Expect = 3.173e-29 Identity = 70/207 (33.82%), Postives = 102/207 (49.28%), Query Frame = 0
Query: 40 GRMILLCGRKDG--IFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIF-LGSVT 243
GR LC R FP VGP+ CMLITY+++ P++ F+ A ++S + + + S LT FS+ ACSDPG++ N ++ ++G I C+ C++ RP+ A HCYECEVC+ +DHHCPWTGKCIG+K L +FYLFL + +H+ F +G+V
Sbjct: 42 GRTRFLCQRSANAFYFPHVLHVGPNLGCMLITYSIILAPTLIFVF--ANSLASWVSVLLIVSIALTFLSFSMVACSDPGVIREHYVN-----AVGDDAG-------------------------------------------ILCAHCQIRRPLNAIHCYECEVCIDGMDHHCPWTGKCIGKKTLYWFYLFLWMICIHMTFGIGTVV 198 The following BLAST results are available for this feature:
BLAST of EWM21471.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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