EWM29736.1, cds917 (CDS) Nannochloropsis gaditana

Overview
NameEWM29736.1
Unique Namecds917
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:723665..724025 +
Alignment locationCM002456.1:724211..724353 +
Alignment locationCM002456.1:724436..724654 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29736.1
Productriboflavin kinase
Orig transcript idgnl|cribi|Naga_100022g30.835.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:723665..724025 +
CM002456.1supercontigCM002456.1:724211..724353 +
CM002456.1supercontigCM002456.1:724436..724654 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0008531riboflavin kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009231riboflavin biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR023468Riboflavin_kinase
IPR023465Riboflavin_kinase_domain
IPR015865Riboflavin_kinase_bac/euk
Homology
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|585112316|gb|EWM29736.1| (riboflavin kinase [Nannochloropsis gaditana])

HSP 1 Score: 495.352 bits (1274), Expect = 2.469e-177
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query:    1 MRCATFWDSQQNVMGPETLAPRSASDARPARRADLARRFFTMFKSGFMGTRTGATKDTSATAVSGSRRYKVMSIESLGDGGSDGSAVNGAGGTTPQLPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAPDWRMLGTREAAWAGG 240
            MRCATFWDSQQNVMGPETLAPRSASDARPARRADLARRFFTMFKSGFMGTRTGATKDTSATAVSGSRRYKVMSIESLGDGGSDGSAVNGAGGTTPQLPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAPDWRMLGTREAAWAGG
Sbjct:    1 MRCATFWDSQQNVMGPETLAPRSASDARPARRADLARRFFTMFKSGFMGTRTGATKDTSATAVSGSRRYKVMSIESLGDGGSDGSAVNGAGGTTPQLPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAPDWRMLGTREAAWAGG 240          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|780666842|ref|XP_011694255.1| (PREDICTED: riboflavin kinase isoform X1 [Wasmannia auropunctata])

HSP 1 Score: 162.155 bits (409), Expect = 4.445e-47
Identity = 72/128 (56.25%), Postives = 97/128 (75.78%), Query Frame = 0
Query:   98 PFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            P+ +   +VKGFGRGSK LGIPTANL+   V  +  +   GIYYG++ L G+VYK VASIG NPY+KN +K++E HLLH+F DDFYGEELK ++ GY+RPE+ F+SL+EL+  I++DI +A + LE P
Sbjct:    8 PYFVSGVIVKGFGRGSKALGIPTANLSESVVNSLPKNLSTGIYYGWAALNGEVYKMVASIGWNPYYKNEKKSLEVHLLHKFEDDFYGEELKVIIGGYIRPEKDFSSLDELITEIKNDIAIAESQLEEP 135          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|751226409|ref|XP_011166636.1| (PREDICTED: riboflavin kinase [Solenopsis invicta] >gi|322787655|gb|EFZ13679.1| hypothetical protein SINV_10326, partial [Solenopsis invicta])

HSP 1 Score: 161.384 bits (407), Expect = 8.743e-47
Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPN----GIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LPF +   ++KGFGRGS+ LGIPTANL+     PVV + P     GIYYG++ L G VYK VASIG NPY+KN +K++E HLLH+F DDFYGEELK ++ GY+RPER F+SL+ELV  I++DI +A   LE P
Sbjct:    6 LPFFVSGIIIKGFGRGSRALGIPTANLS----EPVVSALPKDLNTGIYYGWASLHGTVYKMVASIGWNPYYKNEKKSMEVHLLHKFQDDFYGEELKVIISGYIRPERDFSSLDELVTEIKNDIAIAERQLEEP 134          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|815816681|ref|XP_012229444.1| (PREDICTED: riboflavin kinase [Linepithema humile])

HSP 1 Score: 160.999 bits (406), Expect = 1.395e-46
Identity = 71/129 (55.04%), Postives = 97/129 (75.19%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP+ +  +V++GFGRGSK LGIPTANL    V  +     NGIYYG++ L+G+V+K VASIG NPY+KN +K++E H+LH+F +DFYGEELK ++ GY+RPER F+SLEEL+  I++DI +    LE P
Sbjct:    6 LPYFVSGTVIRGFGRGSKALGIPTANLPEPVVNALSKDLDNGIYYGWASLRGEVHKMVASIGWNPYYKNEKKSMEVHILHKFQNDFYGEELKVIIAGYIRPERDFSSLEELIKEIKNDIAITEQQLEEP 134          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|752873624|ref|XP_011254098.1| (PREDICTED: riboflavin kinase [Camponotus floridanus] >gi|307182662|gb|EFN69796.1| Riboflavin kinase [Camponotus floridanus])

HSP 1 Score: 159.458 bits (402), Expect = 4.762e-46
Identity = 71/129 (55.04%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP+ +  +V+KGFGRGSK LGIPTAN +   V  + +    GIYYG++ L G VYK V SIG NPY+KN +K++E HLLH+F DDFYG+++K ++ GY+RPER F+SLEELV  I++DI +A   LE P
Sbjct:    6 LPYFISGTVIKGFGRGSKALGIPTANFSESVVNDLPEDLNTGIYYGWASLHGQVYKMVTSIGWNPYYKNEKKSMEVHLLHKFHDDFYGKQIKVIITGYIRPERDFSSLEELVREIKNDITIAEQKLEDP 134          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|795113710|ref|XP_011882808.1| (PREDICTED: riboflavin kinase [Vollenhovia emeryi])

HSP 1 Score: 158.303 bits (399), Expect = 1.351e-45
Identity = 74/129 (57.36%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP  +   +VKGFGRGS+ LGIPTANL    V  +      GIYYG++ L G+VYK VASIG NPY+KN  K++E HLLHEF DDFYGEELK ++ GY+RPE+ F+SL+EL+  I++DI VA   LE P
Sbjct:    6 LPCFVSGVIVKGFGRGSRTLGIPTANLPQTVVDALPKDLSTGIYYGWASLHGEVYKMVASIGWNPYYKNKTKSMEVHLLHEFEDDFYGEELKVIISGYIRPEKDFSSLDELIVEIKNDIVVAERQLEEP 134          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|1059870260|ref|XP_017789962.1| (PREDICTED: riboflavin kinase [Habropoda laboriosa] >gi|915663108|gb|KOC65476.1| Riboflavin kinase [Habropoda laboriosa])

HSP 1 Score: 157.918 bits (398), Expect = 2.192e-45
Identity = 71/133 (53.38%), Postives = 98/133 (73.68%), Query Frame = 0
Query:   94 TPQLPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAPD 226
            T  LP+ L   VVKGFGRGSK LG+PTANL+ + V  +      GIYYG++C+ G V+K VASIG NP++KN +KTVE HLLH+F +DFYG+++K ++  Y+RPE+ F S+EEL+ AI++DI VA+  L+  D
Sbjct:    3 TKNLPYFLSGLVVKGFGRGSKDLGVPTANLDDEVVHNLPSDLNTGIYYGWACINGQVHKMVASIGWNPFYKNEKKTVEVHLLHKFENDFYGKQIKVIIMDYIRPEKDFTSVEELMKAIQNDIAVAKKQLQQSD 135          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|749755818|ref|XP_011140404.1| (PREDICTED: riboflavin kinase [Harpegnathos saltator] >gi|307205600|gb|EFN83892.1| Riboflavin kinase [Harpegnathos saltator])

HSP 1 Score: 155.992 bits (393), Expect = 1.180e-44
Identity = 70/129 (54.26%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP+    ++VKGFGRGSK LGIPTAN +   V  + D    GIYYG++ L+  +YK VASIG NPY+KN +K+VE HLLH+F DD YGEELK ++ GY+RPE+ F+S EEL+  I++DI +A   L+ P
Sbjct:    6 LPYFAAGTIVKGFGRGSKALGIPTANFSESVVNTLPDDLNTGIYYGWASLQKQIYKMVASIGWNPYYKNEKKSVEVHLLHKFQDDLYGEELKVIIAGYIRPEKDFSSEEELIKEIKNDIAIAEKRLDEP 134          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|826436581|ref|XP_012529435.1| (PREDICTED: riboflavin kinase [Monomorium pharaonis])

HSP 1 Score: 156.377 bits (394), Expect = 1.222e-44
Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPNGIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP+ +   + KGFGRGS+ LGIPTANL    V  +      G+YYG++ L G+VYK VASIG NPY+KN +K++E HLLH+F D+FYG+ELK ++ GY+RPER F+SL+EL+A I++DI +A   LE P
Sbjct:   14 LPYFVSGIITKGFGRGSRALGIPTANLPESVVNTLPKDLNTGVYYGWASLHGEVYKMVASIGWNPYYKNEKKSLEVHLLHKFQDEFYGKELKIIIGGYIRPERDFSSLDELIAEIKNDIAIAERQLEEP 142          
BLAST of EWM29736.1 vs. NCBI_GenBank
Match: gi|759045507|ref|XP_011331706.1| (PREDICTED: riboflavin kinase [Ooceraea biroi] >gi|607364412|gb|EZA58624.1| Riboflavin kinase [Ooceraea biroi])

HSP 1 Score: 155.606 bits (392), Expect = 1.389e-44
Identity = 76/133 (57.14%), Postives = 97/133 (72.93%), Query Frame = 0
Query:   97 LPFLLKASVVKGFGRGSKLLGIPTANLNMDQVGPVVDSWPN----GIYYGFSCLKGDVYKAVASIGTNPYFKNSQKTVEPHLLHEFPDDFYGEELKFLVCGYVRPERSFASLEELVAAIRSDIEVARTALEAP 225
            LP+     V++GFGRGSK LGIPTANL      PV+++ PN    GIYYG++ L G VYK VASIG NPY+KN +K++E HLLHEF +DFYGEELK ++ GY+R E+ F+S EELV AI++DI +A   LE P
Sbjct:    6 LPYFASGPVIRGFGRGSKELGIPTANL----PEPVINALPNDLDTGIYYGWASLHGQVYKMVASIGWNPYYKNQKKSLEVHLLHEFQNDFYGEELKVIITGYIRQEKDFSSEEELVKAIKNDIAIADERLEEP 134          
The following BLAST results are available for this feature:
BLAST of EWM29736.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112316|gb|EWM29736.1|2.469e-177100.00riboflavin kinase [Nannochloropsis gaditana][more]
gi|780666842|ref|XP_011694255.1|4.445e-4756.25PREDICTED: riboflavin kinase isoform X1 [Wasmannia... [more]
gi|751226409|ref|XP_011166636.1|8.743e-4757.89PREDICTED: riboflavin kinase [Solenopsis invicta] ... [more]
gi|815816681|ref|XP_012229444.1|1.395e-4655.04PREDICTED: riboflavin kinase [Linepithema humile][more]
gi|752873624|ref|XP_011254098.1|4.762e-4655.04PREDICTED: riboflavin kinase [Camponotus floridanu... [more]
gi|795113710|ref|XP_011882808.1|1.351e-4557.36PREDICTED: riboflavin kinase [Vollenhovia emeryi][more]
gi|1059870260|ref|XP_017789962.1|2.192e-4553.38PREDICTED: riboflavin kinase [Habropoda laboriosa]... [more]
gi|749755818|ref|XP_011140404.1|1.180e-4454.26PREDICTED: riboflavin kinase [Harpegnathos saltato... [more]
gi|826436581|ref|XP_012529435.1|1.222e-4454.26PREDICTED: riboflavin kinase [Monomorium pharaonis... [more]
gi|759045507|ref|XP_011331706.1|1.389e-4457.14PREDICTED: riboflavin kinase [Ooceraea biroi] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna917rna917Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications