EWM21444.1, cds9164 (CDS) Nannochloropsis gaditana

Overview
NameEWM21444.1
Unique Namecds9164
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:75464..75585 -
Alignment locationKK037252.1:75211..75283 -
Alignment locationKK037252.1:75077..75117 -
Alignment locationKK037252.1:74754..74886 -
Alignment locationKK037252.1:74442..74687 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21444.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100019g76.466.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:75464..75585 -
KK037252.1supercontigKK037252.1:75211..75283 -
KK037252.1supercontigKK037252.1:75077..75117 -
KK037252.1supercontigKK037252.1:74754..74886 -
KK037252.1supercontigKK037252.1:74442..74687 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21444.1 vs. NCBI_GenBank
Match: gi|585101674|gb|EWM21444.1| (hypothetical protein Naga_100019g76 [Nannochloropsis gaditana])

HSP 1 Score: 416.387 bits (1069), Expect = 2.961e-147
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 
Query:    1 MSSGKRNRSLAELEDHTHAPNDRTALQGLLYGDQVNYRSLRKMLKEIGEEKSDRFSKSQVTRTVERYLKSGALSIDDIRKAVDNAGGNGGKKERKIAKPAAKKAKPSKAGETTPAKAAEKKDDASRKESMAREGCQDSGRVDECVEWLKKIFEVKASRNSRANSTLSLTSKNKRPSGWNFKLLDVRQRGHEITRLLRHEHKVRR 204
            MSSGKRNRSLAELEDHTHAPNDRTALQGLLYGDQVNYRSLRKMLKEIGEEKSDRFSKSQVTRTVERYLKSGALSIDDIRKAVDNAGGNGGKKERKIAKPAAKKAKPSKAGETTPAKAAEKKDDASRKESMAREGCQDSGRVDECVEWLKKIFEVKASRNSRANSTLSLTSKNKRPSGWNFKLLDVRQRGHEITRLLRHEHKVRR
Sbjct:    1 MSSGKRNRSLAELEDHTHAPNDRTALQGLLYGDQVNYRSLRKMLKEIGEEKSDRFSKSQVTRTVERYLKSGALSIDDIRKAVDNAGGNGGKKERKIAKPAAKKAKPSKAGETTPAKAAEKKDDASRKESMAREGCQDSGRVDECVEWLKKIFEVKASRNSRANSTLSLTSKNKRPSGWNFKLLDVRQRGHEITRLLRHEHKVRR 204
The following BLAST results are available for this feature:
BLAST of EWM21444.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101674|gb|EWM21444.1|2.961e-147100.00hypothetical protein Naga_100019g76 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9194rna9194Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications