EWM21495.1, cds9163 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|585101725|gb|EWM21495.1| (atp-dependent rna helicase mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1150.58 bits (2975), Expect = 0.000e+0 Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 0
Query: 1 MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG 560
MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG
Sbjct: 1 MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG 560
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1021517595|ref|XP_016202305.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial [Arachis ipaensis]) HSP 1 Score: 401.364 bits (1030), Expect = 2.418e-130 Identity = 226/522 (43.30%), Postives = 300/522 (57.47%), Query Frame = 0
Query: 66 TAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDL-----------------------------------YFLCDLTD-------------------MLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
++AS+T H TTST S I + + D +PH WY QAR+ R +ILHVGPTNSGKTH+AL++++ + SG+YCGPLRLLAWE+ ++LN +V C+L TGQE +EV+G++H S TVEMADVS Y AVVDE Q++G RG ++TR +LG+ A E+HLCG PA V ++QE+ + GDDVEV Y RLSPL P K + S++ I GDC+V FSR+ +++LK +IE + C +VYG LPPE R QA +FN+ S ++V+VA+DAIGMGLNL I R+IFS L+KFDG R L+ EIKQIAGRAGR+ F A DL Y C + D +L VA +++E PL+L D+Y FCI+P D L FA Y R V+L +I + VP TP LK LE +H VLD+Y+WL R E+ F + + A CS LIEE L+ L
Sbjct: 34 SSASSTKVHPYTTSTHGS--------------IRNDFTDLTSPHTWYPQARRKHRRIILHVGPTNSGKTHQALKQLESSDSGLYCGPLRLLAWEIAKRLNKANVLCDLITGQEREEVDGAKHKSVTVEMADVSFDYQCAVVDEIQMLGCTSRGHSFTRALLGIAADELHLCGDPASVPLIQEILKVTGDDVEVHYYERLSPLVPLKVPLGSYSNIRNGDCIVTFSRRDIYKLKKKIE--NQGKHLCSVVYGSLPPETRTRQASMFNDATSEFDVLVASDAIGMGLNLNISRIIFSTLKKFDGFEFRDLTVPEIKQIAGRAGRYGSNFPVGEVTCINAGDLPLLHSSLNSPSPTLKCAGLLPTFDLMYMYSRLHPEYGFCQILDHFLGNAKLSANYFIVNCEQLLKVAAVIDEFPLSLHDKYLFCISPADMDDEISAQGLTQFAENYAKRGLVRL-REIFTPGTLTVPKTPAALKELESIHKVLDLYVWLSFRL-EESFPDRELAASQKAICSMLIEEFLERL 537
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000753|ref|XP_010256129.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X3 [Nelumbo nucifera]) HSP 1 Score: 397.512 bits (1020), Expect = 5.841e-129 Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D PH WY AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN VPC+L TGQE +E++G++H S TVEMADV+ Y AV+DE Q++G K RG+++TR +LGL A E+HLCG A V ++QE+ GD ++V+ Y RLSPL P K + S+++I+ GDC+V FSR++++ LKN+IE + C +VYG LPPE R QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG R L+ +EIKQIAGRAGRF KF A+D L+ L +G +++E +PL L D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R ED F + + A CS LIEE L+ L
Sbjct: 51 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 532
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000745|ref|XP_010256127.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Nelumbo nucifera]) HSP 1 Score: 397.897 bits (1021), Expect = 6.156e-129 Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D PH WY AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN VPC+L TGQE +E++G++H S TVEMADV+ Y AV+DE Q++G K RG+++TR +LGL A E+HLCG A V ++QE+ GD ++V+ Y RLSPL P K + S+++I+ GDC+V FSR++++ LKN+IE + C +VYG LPPE R QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG R L+ +EIKQIAGRAGRF KF A+D L+ L +G +++E +PL L D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R ED F + + A CS LIEE L+ L
Sbjct: 58 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 539
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000756|ref|XP_010256130.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Nelumbo nucifera]) HSP 1 Score: 397.512 bits (1020), Expect = 6.448e-129 Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D PH WY AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN VPC+L TGQE +E++G++H S TVEMADV+ Y AV+DE Q++G K RG+++TR +LGL A E+HLCG A V ++QE+ GD ++V+ Y RLSPL P K + S+++I+ GDC+V FSR++++ LKN+IE + C +VYG LPPE R QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG R L+ +EIKQIAGRAGRF KF A+D L+ L +G +++E +PL L D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R ED F + + A CS LIEE L+ L
Sbjct: 50 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 531
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1191635526|gb|OTF87669.1| (putative ATP-dependent RNA helicase [Helianthus annuus]) HSP 1 Score: 396.356 bits (1017), Expect = 1.029e-128 Identity = 216/499 (43.29%), Postives = 298/499 (59.72%), Query Frame = 0
Query: 89 RQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF---------------------------QAQDLYFLCDLTDM-------LGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
RQ S + + D PH WY AR+ KR++ LHVGPTNSGKT+ AL+R+++++SG+YCGPLRLLAWEV ++LN +VPC+L TGQE + V+G+RH + TVEMADVS YD AV+DE Q+IG + RG+++TR +LG+PA E+HLCG A V ++QE+ GD++EV+ Y RLSPL P K + S+++I GDC+V FSR+ +++LK IE R C +VYG LPPE R QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS +EKFDG R LS EIKQIAGRAGR+ KF ++ L+ DL M +G+ +++EE +P++L D+Y FC++P D L L FA QY + V+L +I + +VP T ELK LE +H VL++Y+WL R +D F + D A C LIE+ L+ L
Sbjct: 33 RQFSSSTGTVKIDFTDLTRPHTWYPAARRKKRNVFLHVGPTNSGKTYSALKRLEQSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKEIVDGARHKAVTVEMADVSHDYDCAVIDEIQMIGCRSRGFSFTRALLGIPADELHLCGDAAAVPLIQEILSVTGDNIEVQYYDRLSPLVPSKIPLRSFSDIRTGDCIVTFSRRNIYKLKKRIE--DDGRHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNLNISRIIFSEMEKFDGLEMRPLSVPEIKQIAGRAGRYGSKFPVGEVTCLDKKDLPLIHSSLNCPSPILESAGLFPTFDLLYMYSRSHVNVGLCQILEEFVENAKLSENYFITNCEEMLKVAAVLDELPISLHDKYLFCLSPADMNDEILSQGLTQFACQYAKNRIVRLK-EIFTPGTLKVPKTQAELKELESIHKVLELYVWLSFRL-DDSFPDRDLAASQKSICGMLIEDFLERL 527
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000749|ref|XP_010256128.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X2 [Nelumbo nucifera]) HSP 1 Score: 397.127 bits (1019), Expect = 1.299e-128 Identity = 215/486 (44.24%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEEI----------------------------PLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D PH WY AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN VPC+L TGQE +E++G++H S TVEMADV+ Y AV+DE Q++G K RG+++TR +LGL A E+HLCG A V ++QE+ GD ++V+ Y RLSPL P K + S+++I+ GDC+V FSR++++ LKN+IE + C +VYG LPPE R QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG R L+ +EIKQIAGRAGRF KF A+D L+ L +G +++E PL L D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R ED F + + A CS LIEE L+ L
Sbjct: 57 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 538
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1162513101|ref|XP_020418252.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X2 [Prunus persica]) HSP 1 Score: 395.201 bits (1014), Expect = 3.371e-128 Identity = 212/486 (43.62%), Postives = 289/486 (59.47%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDLYFL--------------------------------CDLTDMLG----------------------VARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D +PH WY +AR +R +ILH+GPTNSGKTH AL+R++ + SGIYCGPLRLLAWEV ++LN +VPC+L TGQE +E++G++H + TVEMADV+ Y A++DE Q++G K RG+++TR +LG+ A E+HLCG PA V ++QE+ + GD +EV Y RLSPL P K + S++ I GDC+V FSR K+++LK EIE + C +VYG LPPE R QA FN+ S ++V+VA+DAIGMGLNL I R+IFS ++KFDG R L+ E+KQIAGRAGR+ KF A DL L C L +L VA +++E+PL L+D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R E+ F + + A CS LIEE L+ L
Sbjct: 36 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEKRELTVPEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLHPECGLYQILAHFVENAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRL-REIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEEFLERL 517
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1162513099|ref|XP_020418248.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X1 [Prunus persica] >gi|1139793716|gb|ONI26334.1| hypothetical protein PRUPE_1G018300 [Prunus persica]) HSP 1 Score: 395.586 bits (1015), Expect = 5.840e-128 Identity = 212/486 (43.62%), Postives = 289/486 (59.47%), Query Frame = 0
Query: 102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDLYFL--------------------------------CDLTDMLG----------------------VARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
+ D +PH WY +AR +R +ILH+GPTNSGKTH AL+R++ + SGIYCGPLRLLAWEV ++LN +VPC+L TGQE +E++G++H + TVEMADV+ Y A++DE Q++G K RG+++TR +LG+ A E+HLCG PA V ++QE+ + GD +EV Y RLSPL P K + S++ I GDC+V FSR K+++LK EIE + C +VYG LPPE R QA FN+ S ++V+VA+DAIGMGLNL I R+IFS ++KFDG R L+ E+KQIAGRAGR+ KF A DL L C L +L VA +++E+PL L+D+Y FCI+PVD L FA+ Y + V+L +I + +VP T LK LE +H VLD+Y+WL R E+ F + + A CS LIEE L+ L
Sbjct: 62 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEKRELTVPEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLHPECGLYQILAHFVENAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRL-REIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEEFLERL 543
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|922417987|ref|XP_013607123.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Brassica oleracea var. oleracea]) HSP 1 Score: 395.201 bits (1014), Expect = 1.151e-127 Identity = 219/499 (43.89%), Postives = 295/499 (59.12%), Query Frame = 0
Query: 94 SEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQ-------------------------------------IAGRAGRF---------------------------NGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIA-----PVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLK 520
SEP S + D PH WY AR+ KR +ILHVGPTNSGKT+ AL++++R++SG+YCGPLRLLAWEV ++LN +VPC+L TGQE + VEG+ H + TVEMADV+ YD A++DE Q++G K+RG+++TR +LG+ A E+HLCG PA V +V+++ + GDDVEV Y RLSPL P K V S ++I+ GDC+V FSRK ++ KN IE A + C +VYG LPPE R QA FN+ + ++V+VA+DAIGMGLNL I R+IFS LEKFDG R L+ +EIKQ I RAG F N K + YF+ ++ DM+ A LV+E+PL L+D+Y F ++ PVD FA+ Y + VKL +ILS+ +VP TP ELK LE +H VLD+Y+WL LR ED F + + A C+ LIE+ L+
Sbjct: 68 SEPSSSFDFTDLTCPHTWYPIARRKKRKVILHVGPTNSGKTYNALKQLERSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKELVEGANHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFSFTRALLGIAANELHLCGDPAVVPLVEDILKVTGDDVEVLTYERLSPLVPLKVPVRSVSDIKTGDCLVTFSRKDIYRHKNTIEKAG--KHLCSVVYGSLPPETRTAQATRFNDATNDFDVLVASDAIGMGLNLNISRIIFSTLEKFDGTETRDLTVSEIKQIAGRAGRFRSQFPVGEVTCLHKEDLPLLHSSLKSPSPIIERAGLFPTYDLLSRYSQAHPKLGLYKILEHFVENAKLSSN--YFISNVEDMMKAAALVDELPLKLQDKYLFVVSLCFCSPVDINDEISGRGFAQFAQNYSKTRVVKL-REILSDDTVKVPRTPTELKELESIHKVLDLYVWLSLRL-EDSFPDREVAASQKSICNVLIEQFLE 560 The following BLAST results are available for this feature:
BLAST of EWM21495.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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