EWM21495.1, cds9163 (CDS) Nannochloropsis gaditana

Overview
NameEWM21495.1
Unique Namecds9163
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:72825..73863 -
Alignment locationKK037252.1:72546..72685 -
Alignment locationKK037252.1:71630..72133 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21495.1
Productatp-dependent rna helicase mitochondrial-like protein
Orig transcript idgnl|cribi|Naga_100019g77.517.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:72825..73863 -
KK037252.1supercontigKK037252.1:72546..72685 -
KK037252.1supercontigKK037252.1:71630..72133 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016817hydrolase activity, acting on acid anhydrides
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR022192SUV3_C
IPR001650Helicase_C
Homology
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|585101725|gb|EWM21495.1| (atp-dependent rna helicase mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1150.58 bits (2975), Expect = 0.000e+0
Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 0
Query:    1 MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG 560
            MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG
Sbjct:    1 MLRRVQWIIPGHKRRLKRALIGTPSSCRPPHSGRPVAATIINILARRRNECILFRDSLYLSTATGTAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLVKGEGGGEQGGEEWGRPGSDERRQIDAGEGG 560          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1021517595|ref|XP_016202305.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial [Arachis ipaensis])

HSP 1 Score: 401.364 bits (1030), Expect = 2.418e-130
Identity = 226/522 (43.30%), Postives = 300/522 (57.47%), Query Frame = 0
Query:   66 TAASTTPAHASTTSTGWSRGKGRRQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDL-----------------------------------YFLCDLTD-------------------MLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            ++AS+T  H  TTST  S              I + + D  +PH WY QAR+  R +ILHVGPTNSGKTH+AL++++ + SG+YCGPLRLLAWE+ ++LN  +V C+L TGQE +EV+G++H S TVEMADVS  Y  AVVDE Q++G   RG ++TR +LG+ A E+HLCG PA V ++QE+ +  GDDVEV  Y RLSPL P K  + S++ I  GDC+V FSR+ +++LK +IE     +  C +VYG LPPE R  QA +FN+  S ++V+VA+DAIGMGLNL I R+IFS L+KFDG   R L+  EIKQIAGRAGR+   F         A DL                                   Y  C + D                   +L VA +++E PL+L D+Y FCI+P D         L  FA  Y  R  V+L  +I +     VP TP  LK LE +H VLD+Y+WL  R  E+ F + + A      CS LIEE L+ L
Sbjct:   34 SSASSTKVHPYTTSTHGS--------------IRNDFTDLTSPHTWYPQARRKHRRIILHVGPTNSGKTHQALKQLESSDSGLYCGPLRLLAWEIAKRLNKANVLCDLITGQEREEVDGAKHKSVTVEMADVSFDYQCAVVDEIQMLGCTSRGHSFTRALLGIAADELHLCGDPASVPLIQEILKVTGDDVEVHYYERLSPLVPLKVPLGSYSNIRNGDCIVTFSRRDIYKLKKKIE--NQGKHLCSVVYGSLPPETRTRQASMFNDATSEFDVLVASDAIGMGLNLNISRIIFSTLKKFDGFEFRDLTVPEIKQIAGRAGRYGSNFPVGEVTCINAGDLPLLHSSLNSPSPTLKCAGLLPTFDLMYMYSRLHPEYGFCQILDHFLGNAKLSANYFIVNCEQLLKVAAVIDEFPLSLHDKYLFCISPADMDDEISAQGLTQFAENYAKRGLVRL-REIFTPGTLTVPKTPAALKELESIHKVLDLYVWLSFRL-EESFPDRELAASQKAICSMLIEEFLERL 537          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000753|ref|XP_010256129.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X3 [Nelumbo nucifera])

HSP 1 Score: 397.512 bits (1020), Expect = 5.841e-129
Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D   PH WY  AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN   VPC+L TGQE +E++G++H S TVEMADV+  Y  AV+DE Q++G K RG+++TR +LGL A E+HLCG  A V ++QE+    GD ++V+ Y RLSPL P K  + S+++I+ GDC+V FSR++++ LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG   R L+ +EIKQIAGRAGRF  KF         A+D                          L+    L   +G  +++E                             +PL L D+Y FCI+PVD         L  FA+ Y  +  V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  ED F + + A      CS LIEE L+ L
Sbjct:   51 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 532          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000745|ref|XP_010256127.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Nelumbo nucifera])

HSP 1 Score: 397.897 bits (1021), Expect = 6.156e-129
Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D   PH WY  AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN   VPC+L TGQE +E++G++H S TVEMADV+  Y  AV+DE Q++G K RG+++TR +LGL A E+HLCG  A V ++QE+    GD ++V+ Y RLSPL P K  + S+++I+ GDC+V FSR++++ LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG   R L+ +EIKQIAGRAGRF  KF         A+D                          L+    L   +G  +++E                             +PL L D+Y FCI+PVD         L  FA+ Y  +  V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  ED F + + A      CS LIEE L+ L
Sbjct:   58 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 539          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000756|ref|XP_010256130.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Nelumbo nucifera])

HSP 1 Score: 397.512 bits (1020), Expect = 6.448e-129
Identity = 215/486 (44.24%), Postives = 292/486 (60.08%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D   PH WY  AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN   VPC+L TGQE +E++G++H S TVEMADV+  Y  AV+DE Q++G K RG+++TR +LGL A E+HLCG  A V ++QE+    GD ++V+ Y RLSPL P K  + S+++I+ GDC+V FSR++++ LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG   R L+ +EIKQIAGRAGRF  KF         A+D                          L+    L   +G  +++E                             +PL L D+Y FCI+PVD         L  FA+ Y  +  V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  ED F + + A      CS LIEE L+ L
Sbjct:   50 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 531          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1191635526|gb|OTF87669.1| (putative ATP-dependent RNA helicase [Helianthus annuus])

HSP 1 Score: 396.356 bits (1017), Expect = 1.029e-128
Identity = 216/499 (43.29%), Postives = 298/499 (59.72%), Query Frame = 0
Query:   89 RQTYVSEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF---------------------------QAQDLYFLCDLTDM-------LGVARLVEE----------------------------IPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            RQ   S   +   + D   PH WY  AR+ KR++ LHVGPTNSGKT+ AL+R+++++SG+YCGPLRLLAWEV ++LN  +VPC+L TGQE + V+G+RH + TVEMADVS  YD AV+DE Q+IG + RG+++TR +LG+PA E+HLCG  A V ++QE+    GD++EV+ Y RLSPL P K  + S+++I  GDC+V FSR+ +++LK  IE     R  C +VYG LPPE R  QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS +EKFDG   R LS  EIKQIAGRAGR+  KF                           ++  L+   DL  M       +G+ +++EE                            +P++L D+Y FC++P D     L   L  FA QY   + V+L  +I +    +VP T  ELK LE +H VL++Y+WL  R  +D F + D A      C  LIE+ L+ L
Sbjct:   33 RQFSSSTGTVKIDFTDLTRPHTWYPAARRKKRNVFLHVGPTNSGKTYSALKRLEQSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKEIVDGARHKAVTVEMADVSHDYDCAVIDEIQMIGCRSRGFSFTRALLGIPADELHLCGDAAAVPLIQEILSVTGDNIEVQYYDRLSPLVPSKIPLRSFSDIRTGDCIVTFSRRNIYKLKKRIE--DDGRHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNLNISRIIFSEMEKFDGLEMRPLSVPEIKQIAGRAGRYGSKFPVGEVTCLDKKDLPLIHSSLNCPSPILESAGLFPTFDLLYMYSRSHVNVGLCQILEEFVENAKLSENYFITNCEEMLKVAAVLDELPISLHDKYLFCLSPADMNDEILSQGLTQFACQYAKNRIVRLK-EIFTPGTLKVPKTQAELKELESIHKVLELYVWLSFRL-DDSFPDRDLAASQKSICGMLIEDFLERL 527          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|720000749|ref|XP_010256128.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X2 [Nelumbo nucifera])

HSP 1 Score: 397.127 bits (1019), Expect = 1.299e-128
Identity = 215/486 (44.24%), Postives = 291/486 (59.88%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQD--------------------------LYFLCDLTDMLGVARLVEEI----------------------------PLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D   PH WY  AR+ KR++ILHVGPTNSGKTH AL++++R++SGIYCGPLRLLAWEV ++LN   VPC+L TGQE +E++G++H S TVEMADV+  Y  AV+DE Q++G K RG+++TR +LGL A E+HLCG  A V ++QE+    GD ++V+ Y RLSPL P K  + S+++I+ GDC+V FSR++++ LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++V+VA+DAIGMGLNL I R+IFS L+KFDG   R L+ +EIKQIAGRAGRF  KF         A+D                          L+    L   +G  +++E                              PL L D+Y FCI+PVD         L  FA+ Y  +  V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  ED F + + A      CS LIEE L+ L
Sbjct:   57 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLHPKMGFHQILENFLENAKLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRL-REIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 538          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1162513101|ref|XP_020418252.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X2 [Prunus persica])

HSP 1 Score: 395.201 bits (1014), Expect = 3.371e-128
Identity = 212/486 (43.62%), Postives = 289/486 (59.47%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDLYFL--------------------------------CDLTDMLG----------------------VARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D  +PH WY +AR  +R +ILH+GPTNSGKTH AL+R++ + SGIYCGPLRLLAWEV ++LN  +VPC+L TGQE +E++G++H + TVEMADV+  Y  A++DE Q++G K RG+++TR +LG+ A E+HLCG PA V ++QE+ +  GD +EV  Y RLSPL P K  + S++ I  GDC+V FSR K+++LK EIE     +  C +VYG LPPE R  QA  FN+  S ++V+VA+DAIGMGLNL I R+IFS ++KFDG   R L+  E+KQIAGRAGR+  KF         A DL  L                                C L  +L                       VA +++E+PL L+D+Y FCI+PVD         L  FA+ Y +   V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  E+ F + + A      CS LIEE L+ L
Sbjct:   36 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEKRELTVPEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLHPECGLYQILAHFVENAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRL-REIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEEFLERL 517          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|1162513099|ref|XP_020418248.1| (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X1 [Prunus persica] >gi|1139793716|gb|ONI26334.1| hypothetical protein PRUPE_1G018300 [Prunus persica])

HSP 1 Score: 395.586 bits (1015), Expect = 5.840e-128
Identity = 212/486 (43.62%), Postives = 289/486 (59.47%), Query Frame = 0
Query:  102 YADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKF--------QAQDLYFL--------------------------------CDLTDMLG----------------------VARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTL 522
            + D  +PH WY +AR  +R +ILH+GPTNSGKTH AL+R++ + SGIYCGPLRLLAWEV ++LN  +VPC+L TGQE +E++G++H + TVEMADV+  Y  A++DE Q++G K RG+++TR +LG+ A E+HLCG PA V ++QE+ +  GD +EV  Y RLSPL P K  + S++ I  GDC+V FSR K+++LK EIE     +  C +VYG LPPE R  QA  FN+  S ++V+VA+DAIGMGLNL I R+IFS ++KFDG   R L+  E+KQIAGRAGR+  KF         A DL  L                                C L  +L                       VA +++E+PL L+D+Y FCI+PVD         L  FA+ Y +   V+L  +I +    +VP T   LK LE +H VLD+Y+WL  R  E+ F + + A      CS LIEE L+ L
Sbjct:   62 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEKRELTVPEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLHPECGLYQILAHFVENAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRL-REIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEEFLERL 543          
BLAST of EWM21495.1 vs. NCBI_GenBank
Match: gi|922417987|ref|XP_013607123.1| (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Brassica oleracea var. oleracea])

HSP 1 Score: 395.201 bits (1014), Expect = 1.151e-127
Identity = 219/499 (43.89%), Postives = 295/499 (59.12%), Query Frame = 0
Query:   94 SEPQISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQ-------------------------------------IAGRAGRF---------------------------NGKFQAQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIA-----PVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSE---RVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLK 520
            SEP  S  + D   PH WY  AR+ KR +ILHVGPTNSGKT+ AL++++R++SG+YCGPLRLLAWEV ++LN  +VPC+L TGQE + VEG+ H + TVEMADV+  YD A++DE Q++G K+RG+++TR +LG+ A E+HLCG PA V +V+++ +  GDDVEV  Y RLSPL P K  V S ++I+ GDC+V FSRK ++  KN IE A   +  C +VYG LPPE R  QA  FN+  + ++V+VA+DAIGMGLNL I R+IFS LEKFDG   R L+ +EIKQ                                     I  RAG F                           N K  +   YF+ ++ DM+  A LV+E+PL L+D+Y F ++     PVD            FA+ Y   + VKL  +ILS+   +VP TP ELK LE +H VLD+Y+WL LR  ED F + + A      C+ LIE+ L+
Sbjct:   68 SEPSSSFDFTDLTCPHTWYPIARRKKRKVILHVGPTNSGKTYNALKQLERSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKELVEGANHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFSFTRALLGIAANELHLCGDPAVVPLVEDILKVTGDDVEVLTYERLSPLVPLKVPVRSVSDIKTGDCLVTFSRKDIYRHKNTIEKAG--KHLCSVVYGSLPPETRTAQATRFNDATNDFDVLVASDAIGMGLNLNISRIIFSTLEKFDGTETRDLTVSEIKQIAGRAGRFRSQFPVGEVTCLHKEDLPLLHSSLKSPSPIIERAGLFPTYDLLSRYSQAHPKLGLYKILEHFVENAKLSSN--YFISNVEDMMKAAALVDELPLKLQDKYLFVVSLCFCSPVDINDEISGRGFAQFAQNYSKTRVVKL-REILSDDTVKVPRTPTELKELESIHKVLDLYVWLSLRL-EDSFPDREVAASQKSICNVLIEQFLE 560          
The following BLAST results are available for this feature:
BLAST of EWM21495.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101725|gb|EWM21495.1|0.000e+0100.00atp-dependent rna helicase mitochondrial-like prot... [more]
gi|1021517595|ref|XP_016202305.1|2.418e-13043.30DExH-box ATP-dependent RNA helicase DExH16, mitoch... [more]
gi|720000753|ref|XP_010256129.1|5.841e-12944.24PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
gi|720000745|ref|XP_010256127.1|6.156e-12944.24PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
gi|720000756|ref|XP_010256130.1|6.448e-12944.24PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
gi|1191635526|gb|OTF87669.1|1.029e-12843.29putative ATP-dependent RNA helicase [Helianthus an... [more]
gi|720000749|ref|XP_010256128.1|1.299e-12844.24PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
gi|1162513101|ref|XP_020418252.1|3.371e-12843.62DExH-box ATP-dependent RNA helicase DExH16, mitoch... [more]
gi|1162513099|ref|XP_020418248.1|5.840e-12843.62DExH-box ATP-dependent RNA helicase DExH16, mitoch... [more]
gi|922417987|ref|XP_013607123.1|1.151e-12743.89PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9193rna9193Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications