EWM21513.1, cds9156 (CDS) Nannochloropsis gaditana

Overview
NameEWM21513.1
Unique Namecds9156
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:50187..50723 +

Link to JBrowse

Properties
Property NameValue
Start range50187
Start range.
Protein idEWM21513.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100317g5.5829.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:50187..50723 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21513.1 vs. NCBI_GenBank
Match: gi|585101744|gb|EWM21513.1| (hypothetical protein Naga_100317g5, partial [Nannochloropsis gaditana])

HSP 1 Score: 338.961 bits (868), Expect = 1.760e-117
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 
Query:    1 REGGAWDLDPERFECLSAAEVKEVQRALKITKAQVVLAYECLKLLQRPSLLLLPPASPTGPLLVLGSSGGKRAGGREGGRAEGRERGRAAPVLPPDGEAPAGQGNRRRLRGEKGRAACLPGREIQGTSGGAGGGMSEGRGVGGGKRGSGGGRVREDFGKTEAGTRDMIEWKREMSKEM 178
            REGGAWDLDPERFECLSAAEVKEVQRALKITKAQVVLAYECLKLLQRPSLLLLPPASPTGPLLVLGSSGGKRAGGREGGRAEGRERGRAAPVLPPDGEAPAGQGNRRRLRGEKGRAACLPGREIQGTSGGAGGGMSEGRGVGGGKRGSGGGRVREDFGKTEAGTRDMIEWKREMSKEM
Sbjct:    1 REGGAWDLDPERFECLSAAEVKEVQRALKITKAQVVLAYECLKLLQRPSLLLLPPASPTGPLLVLGSSGGKRAGGREGGRAEGRERGRAAPVLPPDGEAPAGQGNRRRLRGEKGRAACLPGREIQGTSGGAGGGMSEGRGVGGGKRGSGGGRVREDFGKTEAGTRDMIEWKREMSKEM 178
The following BLAST results are available for this feature:
BLAST of EWM21513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101744|gb|EWM21513.1|1.760e-117100.00hypothetical protein Naga_100317g5, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9186rna9186Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications