EWM21529.1, cds9144 (CDS) Nannochloropsis gaditana

Overview
NameEWM21529.1
Unique Namecds9144
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:13807..14370 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21529.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101266g3.2353.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:13807..14370 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21529.1 vs. NCBI_GenBank
Match: gi|585101763|gb|EWM21529.1| (hypothetical protein Naga_101266g3 [Nannochloropsis gaditana])

HSP 1 Score: 382.874 bits (982), Expect = 1.250e-134
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 
Query:    1 MHGTPTTSPSDFPQSSLPLDTGLSMPFIPSKHTSPPRAPKWNKMLPSKTSTTSPTDPDPVEMGEHNGQTDTLFGPFWYERLRGLLCCILSSNEVPESSTASILTIALESQSCEKTPPRKVGNQSWDQTRDAIVLVFPSRHVSQRAAVRSRSDIFKTALFLSEACEWILLGRPIYETPRSPHAFDRGP 187
            MHGTPTTSPSDFPQSSLPLDTGLSMPFIPSKHTSPPRAPKWNKMLPSKTSTTSPTDPDPVEMGEHNGQTDTLFGPFWYERLRGLLCCILSSNEVPESSTASILTIALESQSCEKTPPRKVGNQSWDQTRDAIVLVFPSRHVSQRAAVRSRSDIFKTALFLSEACEWILLGRPIYETPRSPHAFDRGP
Sbjct:    1 MHGTPTTSPSDFPQSSLPLDTGLSMPFIPSKHTSPPRAPKWNKMLPSKTSTTSPTDPDPVEMGEHNGQTDTLFGPFWYERLRGLLCCILSSNEVPESSTASILTIALESQSCEKTPPRKVGNQSWDQTRDAIVLVFPSRHVSQRAAVRSRSDIFKTALFLSEACEWILLGRPIYETPRSPHAFDRGP 187
The following BLAST results are available for this feature:
BLAST of EWM21529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101763|gb|EWM21529.1|1.250e-134100.00hypothetical protein Naga_101266g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9174rna9174Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications