EWM21544.1, cds9129 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|585101791|gb|EWM21544.1| (mitochondrial 2-oxoglutarate malate carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0 Query: 1 MAHCPSCRRREGKRSGWAISWIVSLVFVEYLDCVHVMSIAIDFFPFPPEQVRMQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR 312 MAHCPSCRRREGKRSGWAISWIVSLVFVEYLDCVHVMSIAIDFFPFPPEQVRMQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR Sbjct: 1 MAHCPSCRRREGKRSGWAISWIVSLVFVEYLDCVHVMSIAIDFFPFPPEQVRMQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR 312
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|553189796|ref|XP_005855075.1| (mitochondrial 2-oxoglutarate malate carrier protein [Nannochloropsis gaditana CCMP526] >gi|422293982|gb|EKU21282.1| mitochondrial 2-oxoglutarate malate carrier protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 Query: 53 MQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR 312 MQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR Sbjct: 1 MQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFYR 260
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|299116573|emb|CBN74761.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 281.952 bits (720), Expect = 5.973e-91 Identity = 150/270 (55.56%), Postives = 182/270 (67.41%), Query Frame = 0 Query: 45 PFPPEQVRMQLAGKAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQE---NALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSFY 311 P +VRMQL AG M A+ + G G+Y+GLSAA+ RQ YTT+R+G +D I+ + V++ N L R+ +TAG ASF+ CP+EVC+VRMQ+D +LP R GYKH+GDAL R+A+EEGV TYWRGA PTV RAMVVS TQLGTYDQAK L D LHL S+LTA +VYS ASLPLD+AKTRMQSQAA ST G L Y ST QTL +A EG +LWKGF YFLR G HTV MF+F E+Y L ++Y Sbjct: 35 PMDVLKVRMQLGAGAGHPM-AAAKLVYGESGLRGMYAGLSAAVTRQAVYTTLRVGLYDWIRDHAVHKFVKQEDINVLHRAAVGLTAGGIASFMCCPIEVCMVRMQSDARLPQADRLGYKHIGDALFRIAKEEGVRTYWRGATPTVSRAMVVSMTQLGTYDQAKTVLLPI-LGDNKGLHLASALTAAVVYSYASLPLDSAKTRMQSQAA-STDGKPLKYTSTLQTLSHVAKSEGFFSLWKGFTPYFLRSGTHTVLMFMFKEEYTRLVGAYY 301
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|873220647|emb|CEM35162.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 242.276 bits (617), Expect = 3.127e-75 Identity = 131/269 (48.70%), Postives = 165/269 (61.34%), Query Frame = 0 Query: 45 PFPPEQVRMQLAGKAGGGML-----TTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALAR 308 PF ++RMQL + GG L I K EG GLYSGLSA I RQ +YTT+R G + ++ + +T+GA AS + CPVEV LVRMQADG+LP +RRGY +V +AL R+A+EEG+LT WRG+ PTV RAMVV+ Q G+YDQAK G LH +SL +G YS ASLP D AKTRMQ+Q P+ G YR+ QT+ +I S EG +LWKGF YF RGGGH++FMFL+ EQ + LA Sbjct: 34 PFDVLKIRMQLNAEGGGTKLYKNSVDAVAKIFKTEGLWGLYSGLSAGITRQATYTTLRGGLYQILRDRYTVPGANPTVAVKLGCGLTSGAIASVVCCPVEVSLVRMQADGRLPVAERRGYTNVFNALYRIAKEEGILTCWRGSTPTVARAMVVNMVQFGSYDQAKEVLMAMTPLKGVGLHFSASLISGFTYSAASLPFDIAKTRMQNQKTPA--GEIPQYRNIFQTMWRIGSLEGPLSLWKGFWPYFGRGGGHSIFMFLWLEQLKLLAH 300
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|546309173|ref|XP_005713945.1| (unnamed protein product [Chondrus crispus] >gi|507110358|emb|CDF34126.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 241.891 bits (616), Expect = 3.322e-75 Identity = 129/269 (47.96%), Postives = 173/269 (64.31%), Query Frame = 0 Query: 43 FFPFPPEQVRMQLAGKAGG----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETG-LPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRAL 306 P +VRMQL+ G G++ Q I ++EG + +YSGLSAA+ RQ++YTTMRLG + ++ A + T+ AG AS ++ PVEV +VRM +DG P QRRGYKH+ DAL R+AREEGVL W GA PT++R+MV + QLGTYDQAK + +G + +G LH+ +S T+G +YSLA+LP+D+AKTRMQ+Q GG YRS GQT+ +A EEGV +LW+GF YF R GHTV MFL EQ + + Sbjct: 36 IHPADVVKVRMQLSSDGRGTPYRGVVHAVQTISQKEGVSAMYSGLSAALTRQVTYTTMRLGLYATLRERAADEDGTVSMGTKFAVGTAAGGIASAISTPVEVAMVRMYSDGAAPVAQRRGYKHIADALFRIAREEGVLGLWAGASPTIVRSMVANCVQLGTYDQAKEFYMGSGWMREGVGLHVAASTTSGFMYSLATLPIDSAKTRMQNQRG--MEGGGRKYRSLGQTMAVVAREEGVVSLWRGFLPYFSRCAGHTVAMFLVLEQVKKV 302
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|545701904|ref|XP_005703284.1| (mitochondrial carrier, oxoglutarate:malate antiporter [Galdieria sulphuraria] >gi|452819710|gb|EME26764.1| mitochondrial carrier, oxoglutarate:malate antiporter [Galdieria sulphuraria]) HSP 1 Score: 232.261 bits (591), Expect = 2.717e-71 Identity = 126/268 (47.01%), Postives = 167/268 (62.31%), Query Frame = 0 Query: 45 PFPPEQVRMQLAGKAGG-----GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENAL-TRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETG-LPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRA 305 PF + R+QL+G+ G G + I++REGF GLY GLSAA+ RQ++YTT RLG F +K L+ A + ++ +TAGAC + + P +V LVRM ADG+LP EQRRGYKHV DAL+RV REEGV+T WRG PTV RAM ++ QL +YDQAK +T L DG + H+ +S +GL+ SL SLP D AKTR+Q+ P Y+ + K EG+ +LWKGF YFLR G T+F F+F EQ++A Sbjct: 35 PFDLLKTRLQLSGEGGRPADHRGFSSAVVTIVRREGFFGLYQGLSAALLRQVTYTTTRLGVFGVVKEQLSTHSGGSPAFHLKVIAGLTAGACGALVGTPADVVLVRMTADGRLPIEQRRGYKHVFDALIRVVREEGVITLWRGCVPTVGRAMALNAAQLASYDQAKEVIIDTELLKDGIAAHISASTISGLIASLVSLPFDVAKTRLQNMETSKGP----PYKGMLDCIWKTTRYEGLFSLWKGFIPYFLRLGPQTIFTFIFLEQFKA 298 HSP 2 Score: 60.4622 bits (145), Expect = 9.132e-7 Identity = 45/163 (27.61%), Postives = 73/163 (44.79%), Query Frame = 0 Query: 127 AGACASFLACPVEVCLVRMQADGK-LPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFK-ETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGAL------AYRSTGQTLMKIASEEGVGALWKG 281 +G CA+ + P ++ R+Q G+ P RG+ A++ + R EG ++G ++R + +TT+LG + K +G L +I+ LTAG +L P D RM T G L Y+ L+++ EEGV LW+G Sbjct: 25 SGICATLIIQPFDLLKTRLQLSGEGGRPADHRGFS---SAVVTIVRREGFFGLYQGLSAALLRQVTYTTTRLGVFGVVKEQLSTHSGGSPAFHLKVIAGLTAGACGALVGTPADVVLVRM-------TADGRLPIEQRRGYKHVFDALIRVVREEGVITLWRG 177
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|298712000|emb|CBJ32940.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 231.876 bits (590), Expect = 6.079e-71 Identity = 129/279 (46.24%), Postives = 167/279 (59.86%), Query Frame = 0 Query: 37 MSIAIDFFPFPPEQVRMQLAG--KAGGGMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAF-LAQRQVQENA----LTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALAR 308 MS + P + RMQL G K G ++ +D++K EG LY+GLSAA+ARQ SYTT+RLG +D ++ L R N L R L +G ASF +CP+EVCLVRMQADGKLP +Q+RGY+ V AL R+AR+EG L YWRG G TV+RAMVVS +Q+ TYDQAK + G HL++ + + L ++ S+P DT KTR+Q + A S P Y T L IA E +G+LW GF Y L G TV +FL EQY LA+ Sbjct: 47 MSAWVFIHPADLIKTRMQLLGDSKKGATAVSVGKDLVKNEGVTALYAGLSAALARQASYTTLRLGLYDLLRRLVLDSRTSDMNGVQLLLLRILIGAVSGGMASFCSCPIEVCLVRMQADGKLPKDQQRGYRGVFHALYRIARDEGALAYWRGGGTTVLRAMVVSVSQIATYDQAKASLAP--YVQGFRQHLVAGVISALTFTTISMPFDTVKTRVQQEKAGSKP----RYTGTFNALATIARTESLGSLWTGFPPYLLAKGTLTVILFLIKEQYTELAK 319
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|844848175|ref|XP_012795043.1| (Mitochondrial 2-oxoglutarate/malate carrier protein [Schistosoma haematobium] >gi|685959503|gb|KGB35278.1| Mitochondrial 2-oxoglutarate/malate carrier protein [Schistosoma haematobium]) HSP 1 Score: 227.639 bits (579), Expect = 1.975e-69 Identity = 118/269 (43.87%), Postives = 168/269 (62.45%), Query Frame = 0 Query: 45 PFPPEQVRMQLAG--KAGGGMLTTAQ---DIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEI-KAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETG-LPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRAL 306 P + RMQ++G A G + Q +IK EGF +YSGLSA + RQ +Y+T RLG + + + + +++ N T+ A+TAG C +F+ P E+CL+RM +DG+LPP +R Y +V +AL+R+AREEGVLT WRGA PT+ RA VV+ QL TY QAK E G DG ++H+++SL +G S+ SLP+D AKTR+Q+ T G Y++ G ++++ EG+ +LWKGF YFLR G HTV F+F EQ L Sbjct: 31 PLDLVKNRMQMSGIGSATSGQRNSLQVLLSVIKNEGFFAIYSGLSAGLLRQATYSTARLGIYTNLFEQYTKRKKESPNFFTKISIAVTAGICGAFIGTPAEICLIRMTSDGRLPPAERLNYSNVFNALIRIAREEGVLTLWRGAVPTMGRAAVVNGAQLATYSQAKQKLLEVGHFTDGLNVHIMASLLSGFTTSVFSLPIDIAKTRIQNM---KTIDGKPEYKNMGDVILRVVRNEGILSLWKGFTPYFLRIGPHTVLTFIFLEQLNRL 296
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|551644635|ref|XP_005825108.1| (hypothetical protein GUITHDRAFT_77466 [Guillardia theta CCMP2712] >gi|428169192|gb|EKX38128.1| hypothetical protein GUITHDRAFT_77466 [Guillardia theta CCMP2712]) HSP 1 Score: 226.098 bits (575), Expect = 2.360e-69 Identity = 124/263 (47.15%), Postives = 161/263 (61.22%), Query Frame = 0 Query: 45 PFPPEQVRMQLAGKAGGGMLTTAQD-IIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRAL 306 PF VRM LA +G QD +I +G LY GLSA + RQ+ Y T RLG FD ++ LA+ + + + +R + +GACA+ ++CP EV LVRM D LPPE RR YK V DA +R+AREEG+ YWRG P V RAM+V Q+GTYDQ K TF + G+ S +S+T+GL Y+ ++P +TAK RM SQ P L YRST QT+ IA EGV +LW GF Y+LR GGHTVF F+ EQ ++L Sbjct: 16 PFNTVAVRMNLATASGK---ERRQDLVILDDGAMSLYKGLSAGVMRQVFYATSRLGLFDVMRDALAKYR-EIDVWSRLAVGVASGACAAVVSCPAEVSLVRMSNDSALPPELRRNYKSVVDAAVRIAREEGIFAYWRGCMPFVNRAMLVGACQVGTYDQLKSTFNQLGVTGKFSNVFCASMTSGLFYASVTMPFETAKNRMASQ-RPDPVTKLLPYRSTVQTIGTIAKTEGVLSLWNGFWPYYLRCGGHTVFCFIIVEQLKSL 273
BLAST of EWM21544.1 vs. NCBI_GenBank
Match: gi|751791232|ref|XP_011205203.1| (PREDICTED: mitochondrial 2-oxoglutarate/malate carrier protein [Bactrocera dorsalis]) HSP 1 Score: 226.483 bits (576), Expect = 6.176e-69 Identity = 123/274 (44.89%), Postives = 164/274 (59.85%), Query Frame = 0 Query: 45 PFPPEQVRMQLAGKAGGGMLTTA-----QDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDE-IKAFLAQRQVQENALTRSLSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLP--DGTSLHLISSLTAGLVYSLASLPLDTAKTRMQSQAAPSTPGGALAYRSTGQTLMKIASEEGVGALWKGFGAYFLRGGGHTVFMFLFYEQYRALARSF 310 P + RMQ++G GG + Q ++K+EG GLY G+ AA+ RQ +YTT RLG + + AF AQ + L + AGAC +F+ P EV L+RM +DG+LPP +RR Y +V +AL R+ REEGV WRG+ PTV RAMVV+ TQL +Y Q K FK L +G LH +SS+ +GL+ ++ S+PLD AKTR+Q+ + G YR T L+K+A EGV ALWKGF YF R G HTV F+F EQ L R + Sbjct: 41 PLDLVKTRMQISGAGGGKKEYNSSWHCIQTVVKKEGPLGLYQGIGAALLRQATYTTGRLGVYTYLVDAFQAQFKRTPGVLDSMAMGVIAGACGAFIGTPAEVALIRMASDGRLPPAERRNYTNVANALTRIVREEGVTALWRGSIPTVGRAMVVNMTQLASYSQFKAYFKNGPLKMEEGIGLHFVSSMLSGLLTTITSMPLDIAKTRIQNMK--TAEGAKPEYRGTVDVLLKVARHEGVFALWKGFTPYFCRLGPHTVLTFIFLEQMNKLYRDY 312 The following BLAST results are available for this feature:
BLAST of EWM21544.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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