EWM21545.1, cds9127 (CDS) Nannochloropsis gaditana

Overview
NameEWM21545.1
Unique Namecds9127
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:456299..456315 +
Alignment locationKK037251.1:456448..456563 +
Alignment locationKK037251.1:456610..456776 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21545.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100684g2.4515.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:456299..456315 +
KK037251.1supercontigKK037251.1:456448..456563 +
KK037251.1supercontigKK037251.1:456610..456776 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21545.1 vs. NCBI_GenBank
Match: gi|585101792|gb|EWM21545.1| (hypothetical protein Naga_100684g2 [Nannochloropsis gaditana])

HSP 1 Score: 209.149 bits (531), Expect = 1.451e-68
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 
Query:    1 MEQRTRSALCGHTARMLPVIFSWQVARHSPTMKTLLQCPYCACTNAAVNRVFTSRKWTGWPTINKDMNASQKPDANVSCNSMNRTLENAGLRFVRRDII 99
            MEQRTRSALCGHTARMLPVIFSWQVARHSPTMKTLLQCPYCACTNAAVNRVFTSRKWTGWPTINKDMNASQKPDANVSCNSMNRTLENAGLRFVRRDII
Sbjct:    1 MEQRTRSALCGHTARMLPVIFSWQVARHSPTMKTLLQCPYCACTNAAVNRVFTSRKWTGWPTINKDMNASQKPDANVSCNSMNRTLENAGLRFVRRDII 99
The following BLAST results are available for this feature:
BLAST of EWM21545.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101792|gb|EWM21545.1|1.451e-68100.00hypothetical protein Naga_100684g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9157rna9157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications