EWM21636.1, cds9100 (CDS) Nannochloropsis gaditana

Overview
NameEWM21636.1
Unique Namecds9100
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:401781..403720 -
Alignment locationKK037251.1:401588..401693 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21636.1
Productfibroblast growth factor intracellular binding protein
Orig transcript idgnl|cribi|Naga_100012g81.1968.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:401781..403720 -
KK037251.1supercontigKK037251.1:401588..401693 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0017134fibroblast growth factor binding
Vocabulary: INTERPRO
TermDefinition
IPR008614FIBP
Homology
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|585101891|gb|EWM21636.1| (fibroblast growth factor intracellular binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1374.38 bits (3556), Expect = 0.000e+0
Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0
Query:    1 MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS 681
            MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS
Sbjct:    1 MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS 681          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|698825337|ref|XP_009845697.1| (hypothetical protein H257_18356 [Aphanomyces astaci] >gi|574099210|gb|ETV64840.1| hypothetical protein H257_18356 [Aphanomyces astaci])

HSP 1 Score: 105.916 bits (263), Expect = 1.536e-20
Identity = 73/215 (33.95%), Postives = 107/215 (49.77%), Query Frame = 0
Query:   40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSP 254
            FD  + +P  +  + F LWL+G +  SA   R        R   H     S      T  F+    +  ++  L+     D +RL + LE +L  P     Q   Q+P  ++  M E YY LD +VVR LL +K L  R  KDL++V   +  +L++CRRQF+NLRRIYT LE++  FQ  +  ++   F IS  LA +Y    FL+  RF + P
Sbjct:   17 FDTFLTDPVLLSEDVFALWLEGQNTSSALDIR-------FRSYAHPPPMSS------TLDFSDGTNEVDQLRDLIWRDTVDQYRLFEKLETYLMQPLLLRTQLLFQIPPWQQQDMTEKYYMLDGAVVRRLLGKK-LTSRAQKDLDEVSEHSLRTLKNCRRQFENLRRIYTFLEEKNNFQGPLTRLIMDQFLISEKLAAKYACVVFLIHGRFEVHP 217          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1069345608|ref|XP_018112438.1| (PREDICTED: fibroblast growth factor (acidic) intracellular binding protein L homeolog isoform X1 [Xenopus laevis])

HSP 1 Score: 103.219 bits (256), Expect = 4.113e-20
Identity = 67/212 (31.60%), Postives = 105/212 (49.53%), Query Frame = 0
Query:   41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250
            DV V     I+ + ++LWL G S   A   R                   L+   L ++ AG  V ES+ +        D +R   ++E  L +PP  + Q   Q+P  ++ +++E YY+ D + VRE+L +K L K   KDL+D+   TGV+L+SCRRQFDN +R++  +E+ R      A+V  ++ +F +S  LA  Y    F    RF
Sbjct:   16 DVFVGNTTLIDEDVYQLWLDGYSVSDAVNNR-------------------LKSGILEQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 194          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|148226692|ref|NP_001090040.1| (fibroblast growth factor (acidic) intracellular binding protein L homeolog [Xenopus laevis] >gi|1069345610|ref|XP_018112439.1| PREDICTED: fibroblast growth factor (acidic) intracellular binding protein L homeolog isoform X2 [Xenopus laevis] >gi|66912053|gb|AAH97711.1| MGC115383 protein [Xenopus laevis] >gi|1050381941|gb|OCT84136.1| hypothetical protein XELAEV_18022277mg [Xenopus laevis] >gi|1050381942|gb|OCT84137.1| hypothetical protein XELAEV_18022277mg [Xenopus laevis])

HSP 1 Score: 102.834 bits (255), Expect = 4.579e-20
Identity = 67/212 (31.60%), Postives = 105/212 (49.53%), Query Frame = 0
Query:   41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250
            DV V     I+ + ++LWL G S   A   R                   L+   L ++ AG  V ES+ +        D +R   ++E  L +PP  + Q   Q+P  ++ +++E YY+ D + VRE+L +K L K   KDL+D+   TGV+L+SCRRQFDN +R++  +E+ R      A+V  ++ +F +S  LA  Y    F    RF
Sbjct:    6 DVFVGNTTLIDEDVYQLWLDGYSVSDAVNNR-------------------LKSGILEQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 184          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|301620004|ref|XP_002939371.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein [Xenopus tropicalis] >gi|1043424596|gb|OCA37225.1| hypothetical protein XENTR_v90011017mg [Xenopus tropicalis])

HSP 1 Score: 102.449 bits (254), Expect = 7.094e-20
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 0
Query:   41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250
            DV V     I+   ++LWL G S   A   R                   L+   L ++ AG  V ES+ +        D +R   ++E  L +PP  + Q   Q+P  ++ +++E YY+ D + VRE+L +K L K   KDLED+   TGV+L+SCRRQFDN +R++  +E+ R      A+V  ++ +F +S  LA  Y    F    RF
Sbjct:    6 DVFVGNTTLIDEEVYQLWLDGYSVSDAVNIR-------------------LKSGILDQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLEDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 184          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1173949005|gb|OQR97083.1| (hypothetical protein ACHHYP_20635 [Achlya hypogyna])

HSP 1 Score: 102.834 bits (255), Expect = 1.520e-19
Identity = 70/211 (33.18%), Postives = 105/211 (49.76%), Query Frame = 0
Query:   40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250
            FD  + +P  +  + + LWL+G +  SA   RV                +S   +A  ++  G+  +  ++  L+     D +RL + LE +   P     Q   Q+P  ++  M E YYSLD  VVR LL +K L  +  KDL++V   +  +L++CRRQF+NLRRIY  LE +R FQ   A  +   F IS  LA +Y    FL+  RF
Sbjct:    6 FDTFLTDPVLLSEDVYVLWLEGQNAASALDVRV----------------RSYGPAATPRALPGMADEHDQLRDLIWRDTVDQYRLFEKLESYFMQPKLLRTQLLFQIPAWQQQEMTEKYYSLDGPVVRRLLGKK-LTSKAQKDLDEVSEQSFRTLKNCRRQFENLRRIYAMLE-ERNFQGCAARAICDHFLISERLAAKYACVVFLVHGRF 198          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|668458984|gb|KFB46824.1| (AGAP002269-PA-like protein [Anopheles sinensis])

HSP 1 Score: 100.908 bits (250), Expect = 2.326e-19
Identity = 73/218 (33.49%), Postives = 107/218 (49.08%), Query Frame = 0
Query:   34 MDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEV-LRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250
            M  D   DVCV+    I+   ++LW++G S   A                           AL K   G+    +EV L L+ + + D +R   +LE FL  PP   GQ   Q+  Q+R L+++ YYSLD +V REL  +K    R  KDL++V   TGV L+SCRRQFDN++RI+  +E+    Q ++A  +   F +   LA +Y    F+   RF
Sbjct:    1 MFTDVNVDVCVSNYTIIDPEIYQLWVEGYSSAEAV--------------------------ALLKQKGGIF---AEVPLELIASDVQDHYRTYAMLEKFLHAPPKLSGQLTFQICPQDRSLLIDSYYSLDDTVARELFGKK-FNSRNRKDLDEVAEKTGVRLKSCRRQFDNVKRIFKAVEET---QGNIANNIRQHFVLPEELAQKYAAVVFIACLRF 185          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1072247275|ref|XP_018408370.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein [Nanorana parkeri])

HSP 1 Score: 100.908 bits (250), Expect = 2.423e-19
Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 0
Query:   41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250
            DV V     I+   ++LWL G S   A   R                   L+   L ++ AG  V ES+ +        D +R   ++E  L +PP  + Q   Q+P  ++ +++E YY+ D + VRE+L +K L K   KDL+D+   TGV+L+SCRRQFDN +R++  +E+ R    ++   ++ +F +S  LA  Y    F    RF
Sbjct:    6 DVFVGNTTLIDEEVYQLWLDGYSVSDAVNIR-------------------LKSGILDQTGAGPDVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISAKTGVTLKSCRRQFDNFKRVFKVVEEMRG---NLVENIQQNFLLSDKLARDYAAIVFFANSRF 184          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1012243863|ref|XP_015974988.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein isoform X3 [Rousettus aegyptiacus])

HSP 1 Score: 100.138 bits (248), Expect = 3.203e-19
Identity = 65/211 (30.81%), Postives = 100/211 (47.39%), Query Frame = 0
Query:   40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250
             D+ V     I+ + ++LWL G S   A   RV                   R   L ++ A   V +S+ +        D +R   +LE  L  PP  L Q   Q+P   + L++E YY+ D + VRE+L +K L K   KDL+D+   TG++L+SCRRQFDN +R++  +E+ R     +   ++  F +S  LA  Y    F   +RF
Sbjct:    5 LDIFVGNTTLIDEDVYRLWLDGYSVNDAVALRV-------------------RSGILEQTGATAAVLQSDTM--------DHYRTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISTKTGITLKSCRRQFDNFKRVFKVVEEMRG---SLVDNIQQHFLLSDRLARDYAAIVFFANNRF 184          
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|987961486|ref|XP_015424544.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein isoform X3 [Myotis davidii])

HSP 1 Score: 99.3673 bits (246), Expect = 3.350e-19
Identity = 65/210 (30.95%), Postives = 100/210 (47.62%), Query Frame = 0
Query:   41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250
            D+ V     I+ + ++LWL G S   A   RV                   R   L ++ A   V +S+ +        D +R   +LE  L  PP  L Q   Q+P   + L++E YY+ D + VRE+L +K L K   KDL+D+   TG++L+SCRRQFDN +R++  +E+ R     +   ++  F +S  LA  Y    F   +RF
Sbjct:    6 DIFVGNTTLIDEDVYRLWLDGYSVNDAVALRV-------------------RSGILEQTGATAAVLQSDTM--------DHYRTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISTKTGITLKSCRRQFDNFKRVFKVVEEMRG---SLVDNIQQHFLLSDRLARDYAAIVFFANNRF 184          
The following BLAST results are available for this feature:
BLAST of EWM21636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101891|gb|EWM21636.1|0.000e+0100.00fibroblast growth factor intracellular binding pro... [more]
gi|698825337|ref|XP_009845697.1|1.536e-2033.95hypothetical protein H257_18356 [Aphanomyces astac... [more]
gi|1069345608|ref|XP_018112438.1|4.113e-2031.60PREDICTED: fibroblast growth factor (acidic) intra... [more]
gi|148226692|ref|NP_001090040.1|4.579e-2031.60fibroblast growth factor (acidic) intracellular bi... [more]
gi|301620004|ref|XP_002939371.1|7.094e-2032.08PREDICTED: acidic fibroblast growth factor intrace... [more]
gi|1173949005|gb|OQR97083.1|1.520e-1933.18hypothetical protein ACHHYP_20635 [Achlya hypogyna... [more]
gi|668458984|gb|KFB46824.1|2.326e-1933.49AGAP002269-PA-like protein [Anopheles sinensis][more]
gi|1072247275|ref|XP_018408370.1|2.423e-1930.95PREDICTED: acidic fibroblast growth factor intrace... [more]
gi|1012243863|ref|XP_015974988.1|3.203e-1930.81PREDICTED: acidic fibroblast growth factor intrace... [more]
gi|987961486|ref|XP_015424544.1|3.350e-1930.95PREDICTED: acidic fibroblast growth factor intrace... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9130rna9130Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications