EWM21577.1, cds9080 (CDS) Nannochloropsis gaditana

Overview
NameEWM21577.1
Unique Namecds9080
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:355962..358250 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21577.1
Productribosomal rna methyltransferase nop2-like protein
Orig transcript idgnl|cribi|Naga_100012g60.1909.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:355962..358250 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
GO:0003723RNA binding
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR018314Fmu/NOL1/Nop2p_CS
IPR011023Nop2p
IPR001678MeTrfase_RsmB/NOP2
IPR029063SAM-dependent_MTases
IPR023273RCMT_NOP2
IPR023267RCMT
Homology
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|585101832|gb|EWM21577.1| (ribosomal rna methyltransferase nop2-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1545.41 bits (4000), Expect = 0.000e+0
Identity = 762/762 (100.00%), Postives = 762/762 (100.00%), Query Frame = 0
Query:    1 MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762
            MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS
Sbjct:    1 MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|553185175|ref|XP_005854214.1| (ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526] >gi|422294853|gb|EKU22153.1| ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1521.91 bits (3939), Expect = 0.000e+0
Identity = 752/753 (99.87%), Postives = 752/753 (99.87%), Query Frame = 0
Query:   10 MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762
            MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLL SEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS
Sbjct:    1 MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLPSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 753          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|219112587|ref|XP_002178045.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410930|gb|EEC50859.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 508.449 bits (1308), Expect = 8.970e-170
Identity = 279/508 (54.92%), Postives = 360/508 (70.87%), Query Frame = 0
Query:   75 GKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEE-DFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG-FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALP 580
            G E E   +S+  +S+      ++  EE+  L G    E+E+ A +  FTD+N +WLK  K   N LLSS++E  E E +D+DD  E E E    D+ M  E  E+ EE+         V H    +E     D              S ++  IE ++ +L+DF+ RR+ G AR EY+ QLG  L+E  GYLPEL   FLTM GPAE VEF+ A+D+ RPLV+RANTLKTRRKDLA AL+KRGV+L+PLA  WSKV LKI++S VP+GATPEYL+G Y+LQSA+SM PV+ALAP+P ERVLD+SAAPGGK SY AQLM+NTG +VANDLK ERQKAT+AN+HRLGV+N + C++DGR++  + K  FDR LLDAPCSGLG+++RD SVKVQRT+ADV + +HLQ+ELL AA+D + +   +GG +VYSTCSVAV ENE VV+Y L  R ++++V TGL DFG+PGFTR  + RFH S+ALTRRFYPHVHNMDGFFVCK+QKL+++ P
Sbjct:   39 GDEMEHRKDSKGSDSDRNSVSGDDRNEEENVLVG----EDEM-ASNPFFTDENANWLK-PKGGKNKLLSSDEEESENEGDDDDDLLEVEKEAQLVDEEMEAERLEADEEMRRTVRLHTSVYHLPTTEELQRDVDR---------VVPPSEIRSHIESILEVLADFKTRREPGRARKEYIDQLGLFLAEIQGYLPELIEYFLTMFGPAETVEFVNASDKTRPLVIRANTLKTRRKDLAAALMKRGVTLDPLA-NWSKVGLKIMESPVPIGATPEYLSGMYMLQSAASMCPVLALAPEPKERVLDMSAAPGGKTSYIAQLMRNTGTIVANDLKPERQKATVANMHRLGVKNVIACAHDGRKMGVMFKNRFDRILLDAPCSGLGVISRDPSVKVQRTIADVNQCAHLQKELLLAAIDALKSKGTSGGFMVYSTCSVAVAENEEVVNYALSKR-DIKIVDTGL-DFGKPGFTRYMQKRFHSSVALTRRFYPHVHNMDGFFVCKIQKLSDSRP 528          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|224000816|ref|XP_002290080.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973502|gb|EED91832.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 505.753 bits (1301), Expect = 2.328e-169
Identity = 248/413 (60.05%), Postives = 316/413 (76.51%), Query Frame = 0
Query:  222 SGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG-FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKT-GGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLT---------NALPGKNEEEERAEAKG--------KKRKQMRDGENVESRGNETRKG 615
            S L+ RIE+V+ +L+DF+ RR+ G +R++Y+ +L +D++E  GYL EL   FL+M GP EC+EF+ A+D+PRPLVVR NTLK RRKDLA AL+KRGV L+PLA  WSKV LKI +S VP+GATPEYLAGHY+LQSA+SM PVMAL PQP +RVLD+SAAPGGK SY +QLMKN G+++ANDLK ERQKAT+ANLHRLGVRN V C YDGR++ + ++  FDR LLDAPCSGLG+++RD SVKVQRT+ DV++ +HLQ+ELL AA+D ++A SK  GG +VYSTCSVAV ENE VV+Y+L  R +V++V TGL DFG+PGFTR    RFHPSLALTRRFYPHVHNMDGF+V K+QKL+         NA+  +N  E  A+ K         KK+    DG    ++ N+ ++G
Sbjct:   83 SELRARIEDVLEVLADFKTRREPGRSRSDYIERLAQDMAELFGYLQELVDYFLSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLAP-WSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQPGDRVLDMSAAPGGKTSYVSQLMKNKGVVIANDLKPERQKATVANLHRLGVRNVVTCVYDGRKIGNQLRNSFDRILLDAPCSGLGVISRDPSVKVQRTIPDVQRCAHLQKELLLAAIDALNAKSKKGGGCMVYSTCSVAVAENEEVVNYLLSKR-DVKLVETGL-DFGKPGFTRFEHKRFHPSLALTRRFYPHVHNMDGFYVAKIQKLSDKKKGEEDKNAVSEENVNEVEADGKNEAEEVILEKKQVVKVDGNKHSTKKNDKKRG 492          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|1173954290|gb|OQS01765.1| (ribosomal RNA methyltransferase nop2-like protein [Achlya hypogyna])

HSP 1 Score: 512.301 bits (1318), Expect = 5.294e-169
Identity = 253/460 (55.00%), Postives = 331/460 (71.96%), Query Frame = 0
Query:  122 GFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGL-ASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALP 580
            GF+D NQ WLK K           +  E  + E  DDE E E +   A    + E+++     A+EE    + + G  +  DE   E  E G     GL A+ + +R+++V+ +L DF+ARR+A  +R+EYV QL  D++ + GY  +L  +F+ M  PAE +EF+ AN++PRPLV+RANTLKTRR+DLAQAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS  PV+ALAP+ +ERVLD+  APGGK +Y AQLM+N+G L+ANDLK  R KAT+ANLHRLGV+N  V +YDGR+LPSV  GFDR LLDAPC+G+G++ARD S+K Q+T  DV ++SHLQ+EL+ AA+D VD+ S +GG++VYSTCSV VEENE VV+Y L+ R  V++V  GL D G+PGFTR  + RFHPS+ LTRRFYPHVHNMDGF+V K +K  NA P
Sbjct:   78 GFSDHNQKWLKPK-----------NRAESSDSEGSDDETEFERKAKRAAAKEAREAQD-----AEEELQLNLANNGKYELPDEDDSENDEAG-----GLDAADVYQRVKDVIEVLGDFKARREAHRSRSEYVDQLTTDMASYFGYNRDLMVLFMQMFSPAETLEFIEANEQPRPLVIRANTLKTRRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSFGPVLALAPEANERVLDMCCAPGGKTTYIAQLMRNSGTLIANDLKKNRLKATVANLHRLGVKNCAVANYDGRKLPSVFTGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVFRLSHLQKELILAAIDAVDSKSASGGIVVYSTCSVMVEENEAVVEYALKKR-AVKLVDCGL-DHGKPGFTRYQQQRFHPSMTLTRRFYPHVHNMDGFYVAKFKKYANAKP 513          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|1210519875|dbj|GAX21304.1| (25S rRNA (cytosine2870-C5)-methyltransferase [Fistulifera solaris])

HSP 1 Score: 505.753 bits (1301), Expect = 1.792e-167
Identity = 277/564 (49.11%), Postives = 370/564 (65.60%), Query Frame = 0
Query:  123 FTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEE------EDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG--FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTG-----GVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRD-----GENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSS 668
            F+D+N +W+K KK         +D+ EEEEE +E +E ++E    E +  +  E ++  EE ADEE      +   + H    +E ++  D              S LK  I  ++ +L+DF+ RR+ G +R EYV +L   L+E +GYLPEL   FLTM  PAE VEF+ A+D+PRPLV+R NTLK RRKDLA AL+KRGVSL+PLA  WSKV LKI++S VP+GATPEYL G Y+LQSA+SM PVMAL PQP ERVLD+SAAPGGK SY AQLM+NTG L+ANDLK +RQKAT+ANLHRLGV+N + C++DGR+L  + +   FDR LLDAPCSGLG+++RD SVKVQRT+AD+++ +HLQ+ELL +A+D +     T      GV+VYSTCSV+V ENELVV Y L+ R ++R+V  GL DFG PGFTR  +HRFHP++  TRRFYPHVHNMDGFFV K+QKL++   G+ ++ +  E     +    D      E      N  + G +  +KGE E P   K KK    P  P+++  Q++    +++ R    A  S+
Sbjct:   73 FSDENATWIKPKKQALVDSDDDDDDDEEEEESEEQEESDDEELEIEKESRLVDEEQDLIEEEADEEMRRTISQHTAIYHLPTSEEVEKDVDR---------VVPPSELKSHINSILEVLADFKKRREPGRSRKEYVDRLASFLAELNGYLPELVEYFLTMFSPAETVEFIHASDKPRPLVIRTNTLKARRKDLAAALIKRGVSLDPLAA-WSKVGLKIVESTVPIGATPEYLTGMYMLQSAASMCPVMALGPQPKERVLDMSAAPGGKTSYMAQLMRNTGCLIANDLKPDRQKATVANLHRLGVKNTIACAHDGRKLGKIFQQNRFDRILLDAPCSGLGVISRDPSVKVQRTIADIQQTAHLQKELLLSAIDALKVAKNTNETTGPGVMVYSTCSVSVTENELVVQYALKKR-DIRIVDAGL-DFGVPGFTRYQQHRFHPTMTKTRRFYPHVHNMDGFFVAKIQKLSDKHLGEGDKSDEGEVPPDNQSDKVDVPVEKSETFVKDKNAKKNGKRNNQKGEREPP---KDKKVSVPPPRPIKKRKQNSNSAKISKPRRLKTANQST 621          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|970645467|gb|KUF85936.1| (Ribosomal RNA methyltransferase nop2 protein [Phytophthora nicotianae])

HSP 1 Score: 503.827 bits (1296), Expect = 2.784e-167
Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0
Query:  224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588
            + +RI++VV +LS F ARR+ G +R +Y+  L +DL+ + GY  EL  MFL M  PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N  V  YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+   DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R  V++V TGL D G+PGFTR  + RFHPS+ LTRRFYPHVHNMDGF+V K +K  N +P + +E ++
Sbjct:  133 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 494          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|695381629|ref|XP_009517148.1| (hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae] >gi|348690059|gb|EGZ29873.1| hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae])

HSP 1 Score: 499.975 bits (1286), Expect = 2.848e-167
Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0
Query:  224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588
            + +RI++VV +LS F ARR+ G +R +YV  L +DL+ + GY  EL  MFL M  PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N  V  YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+   DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R  V++V TGL D G+PGFTR  + RFHPS+ LTRRFYPHVHNMDGF+V K +K  N +P + ++ ++
Sbjct:   35 VYQRIKDVVEVLSHFSARREPGRSRVDYVESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKDAKK 396          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|675176873|ref|XP_008897321.1| (ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica INRA-310] >gi|568103135|gb|ETN17806.1| ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica INRA-310])

HSP 1 Score: 504.212 bits (1297), Expect = 4.942e-167
Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0
Query:  224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588
            + +RI++VV +LS F ARR+ G +R +Y+  L +DL+ + GY  EL  MFL M  PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N  V  YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+   DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R  V++V TGL D G+PGFTR  + RFHPS+ LTRRFYPHVHNMDGF+V K +K  N +P + +E ++
Sbjct:  165 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 526          
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|570938572|gb|ETP03829.1| (ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica CJ01A1])

HSP 1 Score: 504.212 bits (1297), Expect = 5.050e-167
Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0
Query:  224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588
            + +RI++VV +LS F ARR+ G +R +Y+  L +DL+ + GY  EL  MFL M  PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA  WSKV LKI DS VP+GATPEYLAGHY+LQSASS+  VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N  V  YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+   DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R  V++V TGL D G+PGFTR  + RFHPS+ LTRRFYPHVHNMDGF+V K +K  N +P + +E ++
Sbjct:  165 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 526          
The following BLAST results are available for this feature:
BLAST of EWM21577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101832|gb|EWM21577.1|0.000e+0100.00ribosomal rna methyltransferase nop2-like protein ... [more]
gi|553185175|ref|XP_005854214.1|0.000e+099.87ribosomal rna methyltransferase nop2 [Nannochlorop... [more]
gi|219112587|ref|XP_002178045.1|8.970e-17054.92predicted protein, partial [Phaeodactylum tricornu... [more]
gi|224000816|ref|XP_002290080.1|2.328e-16960.05predicted protein, partial [Thalassiosira pseudona... [more]
gi|1173954290|gb|OQS01765.1|5.294e-16955.00ribosomal RNA methyltransferase nop2-like protein ... [more]
gi|1210519875|dbj|GAX21304.1|1.792e-16749.1125S rRNA (cytosine2870-C5)-methyltransferase [Fist... [more]
gi|970645467|gb|KUF85936.1|2.784e-16763.01Ribosomal RNA methyltransferase nop2 protein [Phyt... [more]
gi|695381629|ref|XP_009517148.1|2.848e-16763.01hypothetical protein PHYSODRAFT_476935 [Phytophtho... [more]
gi|675176873|ref|XP_008897321.1|4.942e-16763.01ribosomal RNA small subunit methyltransferase B [P... [more]
gi|570938572|gb|ETP03829.1|5.050e-16763.01ribosomal RNA small subunit methyltransferase B [P... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9110rna9110Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications