EWM21577.1, cds9080 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|585101832|gb|EWM21577.1| (ribosomal rna methyltransferase nop2-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1545.41 bits (4000), Expect = 0.000e+0 Identity = 762/762 (100.00%), Postives = 762/762 (100.00%), Query Frame = 0 Query: 1 MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762 MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS Sbjct: 1 MIKAEFSNSMGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|553185175|ref|XP_005854214.1| (ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526] >gi|422294853|gb|EKU22153.1| ribosomal rna methyltransferase nop2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1521.91 bits (3939), Expect = 0.000e+0 Identity = 752/753 (99.87%), Postives = 752/753 (99.87%), Query Frame = 0 Query: 10 MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 762 MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLL SEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS Sbjct: 1 MGKKRAPSVQSGSPSSVSRAIRRNDGGDARATRRDTAERQRKLPLAPSTKPISNGRQHQLRGKKKGKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLPSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRDGENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSSGTNSERDGPLVEKDKHTRKTESKTPKASGEDVVKEGKKKSGQSKQEGGRHEVGGGRKVSNGERQKSEQKSGRPKESQGKPVGRKGKKAKGVMSS 753
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|219112587|ref|XP_002178045.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410930|gb|EEC50859.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 508.449 bits (1308), Expect = 8.970e-170 Identity = 279/508 (54.92%), Postives = 360/508 (70.87%), Query Frame = 0 Query: 75 GKETELESESEVEESEAEDEDAEEVGEEDEALEGSGSDEEELHAKDLGFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEE-DFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG-FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALP 580 G E E +S+ +S+ ++ EE+ L G E+E+ A + FTD+N +WLK K N LLSS++E E E +D+DD E E E D+ M E E+ EE+ V H +E D S ++ IE ++ +L+DF+ RR+ G AR EY+ QLG L+E GYLPEL FLTM GPAE VEF+ A+D+ RPLV+RANTLKTRRKDLA AL+KRGV+L+PLA WSKV LKI++S VP+GATPEYL+G Y+LQSA+SM PV+ALAP+P ERVLD+SAAPGGK SY AQLM+NTG +VANDLK ERQKAT+AN+HRLGV+N + C++DGR++ + K FDR LLDAPCSGLG+++RD SVKVQRT+ADV + +HLQ+ELL AA+D + + +GG +VYSTCSVAV ENE VV+Y L R ++++V TGL DFG+PGFTR + RFH S+ALTRRFYPHVHNMDGFFVCK+QKL+++ P Sbjct: 39 GDEMEHRKDSKGSDSDRNSVSGDDRNEEENVLVG----EDEM-ASNPFFTDENANWLK-PKGGKNKLLSSDEEESENEGDDDDDLLEVEKEAQLVDEEMEAERLEADEEMRRTVRLHTSVYHLPTTEELQRDVDR---------VVPPSEIRSHIESILEVLADFKTRREPGRARKEYIDQLGLFLAEIQGYLPELIEYFLTMFGPAETVEFVNASDKTRPLVIRANTLKTRRKDLAAALMKRGVTLDPLA-NWSKVGLKIMESPVPIGATPEYLSGMYMLQSAASMCPVLALAPEPKERVLDMSAAPGGKTSYIAQLMRNTGTIVANDLKPERQKATVANMHRLGVKNVIACAHDGRKMGVMFKNRFDRILLDAPCSGLGVISRDPSVKVQRTIADVNQCAHLQKELLLAAIDALKSKGTSGGFMVYSTCSVAVAENEEVVNYALSKR-DIKIVDTGL-DFGKPGFTRYMQKRFHSSVALTRRFYPHVHNMDGFFVCKIQKLSDSRP 528
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|224000816|ref|XP_002290080.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973502|gb|EED91832.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 505.753 bits (1301), Expect = 2.328e-169 Identity = 248/413 (60.05%), Postives = 316/413 (76.51%), Query Frame = 0 Query: 222 SGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG-FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKT-GGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLT---------NALPGKNEEEERAEAKG--------KKRKQMRDGENVESRGNETRKG 615 S L+ RIE+V+ +L+DF+ RR+ G +R++Y+ +L +D++E GYL EL FL+M GP EC+EF+ A+D+PRPLVVR NTLK RRKDLA AL+KRGV L+PLA WSKV LKI +S VP+GATPEYLAGHY+LQSA+SM PVMAL PQP +RVLD+SAAPGGK SY +QLMKN G+++ANDLK ERQKAT+ANLHRLGVRN V C YDGR++ + ++ FDR LLDAPCSGLG+++RD SVKVQRT+ DV++ +HLQ+ELL AA+D ++A SK GG +VYSTCSVAV ENE VV+Y+L R +V++V TGL DFG+PGFTR RFHPSLALTRRFYPHVHNMDGF+V K+QKL+ NA+ +N E A+ K KK+ DG ++ N+ ++G Sbjct: 83 SELRARIEDVLEVLADFKTRREPGRSRSDYIERLAQDMAELFGYLQELVDYFLSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLAP-WSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQPGDRVLDMSAAPGGKTSYVSQLMKNKGVVIANDLKPERQKATVANLHRLGVRNVVTCVYDGRKIGNQLRNSFDRILLDAPCSGLGVISRDPSVKVQRTIPDVQRCAHLQKELLLAAIDALNAKSKKGGGCMVYSTCSVAVAENEEVVNYLLSKR-DVKLVETGL-DFGKPGFTRFEHKRFHPSLALTRRFYPHVHNMDGFYVAKIQKLSDKKKGEEDKNAVSEENVNEVEADGKNEAEEVILEKKQVVKVDGNKHSTKKNDKKRG 492
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|1173954290|gb|OQS01765.1| (ribosomal RNA methyltransferase nop2-like protein [Achlya hypogyna]) HSP 1 Score: 512.301 bits (1318), Expect = 5.294e-169 Identity = 253/460 (55.00%), Postives = 331/460 (71.96%), Query Frame = 0 Query: 122 GFTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEEEDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGL-ASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALP 580 GF+D NQ WLK K + E + E DDE E E + A + E+++ A+EE + + G + DE E E G GL A+ + +R+++V+ +L DF+ARR+A +R+EYV QL D++ + GY +L +F+ M PAE +EF+ AN++PRPLV+RANTLKTRR+DLAQAL++RGV+L+PLA WSKV LKI DS VP+GATPEYLAGHY+LQSASS PV+ALAP+ +ERVLD+ APGGK +Y AQLM+N+G L+ANDLK R KAT+ANLHRLGV+N V +YDGR+LPSV GFDR LLDAPC+G+G++ARD S+K Q+T DV ++SHLQ+EL+ AA+D VD+ S +GG++VYSTCSV VEENE VV+Y L+ R V++V GL D G+PGFTR + RFHPS+ LTRRFYPHVHNMDGF+V K +K NA P Sbjct: 78 GFSDHNQKWLKPK-----------NRAESSDSEGSDDETEFERKAKRAAAKEAREAQD-----AEEELQLNLANNGKYELPDEDDSENDEAG-----GLDAADVYQRVKDVIEVLGDFKARREAHRSRSEYVDQLTTDMASYFGYNRDLMVLFMQMFSPAETLEFIEANEQPRPLVIRANTLKTRRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSFGPVLALAPEANERVLDMCCAPGGKTTYIAQLMRNSGTLIANDLKKNRLKATVANLHRLGVKNCAVANYDGRKLPSVFTGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVFRLSHLQKELILAAIDAVDSKSASGGIVVYSTCSVMVEENEAVVEYALKKR-AVKLVDCGL-DHGKPGFTRYQQQRFHPSMTLTRRFYPHVHNMDGFYVAKFKKYANAKP 513
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|1210519875|dbj|GAX21304.1| (25S rRNA (cytosine2870-C5)-methyltransferase [Fistulifera solaris]) HSP 1 Score: 505.753 bits (1301), Expect = 1.792e-167 Identity = 277/564 (49.11%), Postives = 370/564 (65.60%), Query Frame = 0 Query: 123 FTDDNQSWLKMKKSNTNGLLSSEDEVEEEEEEDEDDEEEEEGEGDEADDFMSGESEESGEEVADEE------EDFEVGHEGDQDEEDEAGDEGGEGGPWPVAGLASGLKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKG--FDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTG-----GVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEERAEAKGKKRKQMRD-----GENVESRGNETRKGVQKVEKGEEEAPFRIKKKKKGSQPQGPVREIPQSTAETTVAESRVSGQATMSS 668 F+D+N +W+K KK +D+ EEEEE +E +E ++E E + + E ++ EE ADEE + + H +E ++ D S LK I ++ +L+DF+ RR+ G +R EYV +L L+E +GYLPEL FLTM PAE VEF+ A+D+PRPLV+R NTLK RRKDLA AL+KRGVSL+PLA WSKV LKI++S VP+GATPEYL G Y+LQSA+SM PVMAL PQP ERVLD+SAAPGGK SY AQLM+NTG L+ANDLK +RQKAT+ANLHRLGV+N + C++DGR+L + + FDR LLDAPCSGLG+++RD SVKVQRT+AD+++ +HLQ+ELL +A+D + T GV+VYSTCSV+V ENELVV Y L+ R ++R+V GL DFG PGFTR +HRFHP++ TRRFYPHVHNMDGFFV K+QKL++ G+ ++ + E + D E N + G + +KGE E P K KK P P+++ Q++ +++ R A S+ Sbjct: 73 FSDENATWIKPKKQALVDSDDDDDDDEEEEESEEQEESDDEELEIEKESRLVDEEQDLIEEEADEEMRRTISQHTAIYHLPTSEEVEKDVDR---------VVPPSELKSHINSILEVLADFKKRREPGRSRKEYVDRLASFLAELNGYLPELVEYFLTMFSPAETVEFIHASDKPRPLVIRTNTLKARRKDLAAALIKRGVSLDPLAA-WSKVGLKIVESTVPIGATPEYLTGMYMLQSAASMCPVMALGPQPKERVLDMSAAPGGKTSYMAQLMRNTGCLIANDLKPDRQKATVANLHRLGVKNTIACAHDGRKLGKIFQQNRFDRILLDAPCSGLGVISRDPSVKVQRTIADIQQTAHLQKELLLSAIDALKVAKNTNETTGPGVMVYSTCSVSVTENELVVQYALKKR-DIRIVDAGL-DFGVPGFTRYQQHRFHPTMTKTRRFYPHVHNMDGFFVAKIQKLSDKHLGEGDKSDEGEVPPDNQSDKVDVPVEKSETFVKDKNAKKNGKRNNQKGEREPP---KDKKVSVPPPRPIKKRKQNSNSAKISKPRRLKTANQST 621
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|970645467|gb|KUF85936.1| (Ribosomal RNA methyltransferase nop2 protein [Phytophthora nicotianae]) HSP 1 Score: 503.827 bits (1296), Expect = 2.784e-167 Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0 Query: 224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588 + +RI++VV +LS F ARR+ G +R +Y+ L +DL+ + GY EL MFL M PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA WSKV LKI DS VP+GATPEYLAGHY+LQSASS+ VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N V YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+ DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R V++V TGL D G+PGFTR + RFHPS+ LTRRFYPHVHNMDGF+V K +K N +P + +E ++ Sbjct: 133 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 494
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|695381629|ref|XP_009517148.1| (hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae] >gi|348690059|gb|EGZ29873.1| hypothetical protein PHYSODRAFT_476935 [Phytophthora sojae]) HSP 1 Score: 499.975 bits (1286), Expect = 2.848e-167 Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0 Query: 224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588 + +RI++VV +LS F ARR+ G +R +YV L +DL+ + GY EL MFL M PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA WSKV LKI DS VP+GATPEYLAGHY+LQSASS+ VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N V YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+ DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R V++V TGL D G+PGFTR + RFHPS+ LTRRFYPHVHNMDGF+V K +K N +P + ++ ++ Sbjct: 35 VYQRIKDVVEVLSHFSARREPGRSRVDYVESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKDAKK 396
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|675176873|ref|XP_008897321.1| (ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica INRA-310] >gi|568103135|gb|ETN17806.1| ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica INRA-310]) HSP 1 Score: 504.212 bits (1297), Expect = 4.942e-167 Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0 Query: 224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588 + +RI++VV +LS F ARR+ G +R +Y+ L +DL+ + GY EL MFL M PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA WSKV LKI DS VP+GATPEYLAGHY+LQSASS+ VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N V YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+ DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R V++V TGL D G+PGFTR + RFHPS+ LTRRFYPHVHNMDGF+V K +K N +P + +E ++ Sbjct: 165 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 526
BLAST of EWM21577.1 vs. NCBI_GenBank
Match: gi|570938572|gb|ETP03829.1| (ribosomal RNA small subunit methyltransferase B [Phytophthora parasitica CJ01A1]) HSP 1 Score: 504.212 bits (1297), Expect = 5.050e-167 Identity = 230/365 (63.01%), Postives = 293/365 (80.27%), Query Frame = 0 Query: 224 LKERIEEVVHILSDFRARRKAGVARAEYVRQLGRDLSEHHGYLPELTGMFLTMLGPAECVEFMAANDRPRPLVVRANTLKTRRKDLAQALLKRGVSLEPLAGGWSKVALKIIDSQVPVGATPEYLAGHYILQSASSMTPVMALAPQPHERVLDLSAAPGGKASYCAQLMKNTGLLVANDLKSERQKATIANLHRLGVRNAVVCSYDGRRLPSVMKGFDRALLDAPCSGLGIVARDQSVKVQRTLADVRKMSHLQRELLRAAVDCVDAGSKTGGVLVYSTCSVAVEENELVVDYILRARPNVRVVPTGLGDFGRPGFTRVAEHRFHPSLALTRRFYPHVHNMDGFFVCKLQKLTNALPGKNEEEER 588 + +RI++VV +LS F ARR+ G +R +Y+ L +DL+ + GY EL MFL M PAECVEF+ AN++PRPLV+R NTLK RR+DLAQAL++RGV+L+PLA WSKV LKI DS VP+GATPEYLAGHY+LQSASS+ VMALAPQ +ERVLD++ APGGK +Y AQLMKNTG ++ANDLK +R KAT+ANLHRLGV+N V YDGR++PS+ KGFDR LLDAPC+G+G++ARD S+K Q+ DV++++HLQ+ELL AA+D VDA SKTGG ++YSTCSV V+ENE VVDY LR R V++V TGL D G+PGFTR + RFHPS+ LTRRFYPHVHNMDGF+V K +K N +P + +E ++ Sbjct: 165 VYQRIKDVVEVLSHFSARREPGRSRVDYMESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAK-WSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKR-CVKLVDTGL-DHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKEAKK 526 The following BLAST results are available for this feature:
BLAST of EWM21577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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