EWM29734.1, cds907 (CDS) Nannochloropsis gaditana

Overview
NameEWM29734.1
Unique Namecds907
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:704352..704472 -
Alignment locationCM002456.1:703595..704160 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29734.1
Productprotein of unknown function DUF862, eukaryotic
Orig transcript idgnl|cribi|Naga_100022g18.833.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:704352..704472 -
CM002456.1supercontigCM002456.1:703595..704160 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008580PPPDE_dom
Homology
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|585112314|gb|EWM29734.1| (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana])

HSP 1 Score: 464.922 bits (1195), Expect = 1.040e-165
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MYKGNNGDSTGSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRLAGATEAQGASSA 228
            MYKGNNGDSTGSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRLAGATEAQGASSA
Sbjct:    1 MYKGNNGDSTGSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRLAGATEAQGASSA 228          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|813134393|ref|XP_012198138.1| (hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65] >gi|641537091|gb|KDO30954.1| hypothetical protein SPRG_04142 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 184.111 bits (466), Expect = 4.335e-55
Identity = 96/203 (47.29%), Postives = 121/203 (59.61%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRL 216
            T V LNVYDL  AN Y H LG+G +H+GV+IAG EY++AGGAGIF   P+ A GA FRESIP+G    +    R+ L+ LRS+F    Y+L+  NCN FS  L + LLG PIPAYVNR+A+ GSF SC LP E+T QAPV  +   T A  P           + T+F G G+     A     D+    RRE+ R A M R+
Sbjct:    7 TAVILNVYDLMEANAYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQADGAVFRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTTANTP---------RASYTSFGGSGISLRGTAPSTDTDEDMEVRREKRRLAAMRRI 200          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|813225908|ref|XP_012212031.1| (hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65] >gi|641521779|gb|KDO17263.1| hypothetical protein SPRG_17305 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 183.341 bits (464), Expect = 9.083e-55
Identity = 95/203 (46.80%), Postives = 121/203 (59.61%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRL 216
            T V LNVYDL  AN Y H LG+G +H+GV+IAG EY++AGGAGIF   P+ A GA FRESIP+G    +    R+ L+ LRS+F    Y+L+  NCN FS  L + L+G PIPAYVNR+A+ GSF SC LP E+T QAPV  +   T A  P           + T+F G G+     A     D+    RRE+ R A M R+
Sbjct:    7 TAVILNVYDLVEANAYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQADGAVFRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLVGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPVEADSTPTAANNP---------RASYTSFGGSGISLRGTAPSTDTDEDMEVRREKRRLAAMRRI 200          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|669140320|ref|XP_008605728.1| (hypothetical protein SDRG_01949 [Saprolegnia diclina VS20] >gi|530742642|gb|EQC40884.1| hypothetical protein SDRG_01949 [Saprolegnia diclina VS20])

HSP 1 Score: 182.956 bits (463), Expect = 1.105e-54
Identity = 100/203 (49.26%), Postives = 126/203 (62.07%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKASGVPADKSEYERRERIRQATMTRL 216
            T V LNVYDL  AN Y H LG+G +H+GV+IAG EY++AGGAGIF   P+ A GA FRESIP+G    +    R+ L+ LRS+F    Y+L+  NCN FS  L + LLG PIPAYVNR+A+ GSF SC LP E+T QAPV  EG+ST  A  + QR       + T+F G G+     A     D+    RRE+ R A M R+
Sbjct:    7 TAVILNVYDLMDANAYTHGLGLGAFHSGVDIAGDEYSFAGGAGIFTCRPKQADGAVFRESIPMGYFEGSSNDARQVLDELRSEFQGHQYNLLTKNCNTFSNELCLRLLGVPIPAYVNRMAYLGSFLSCLLPRELTGQAPV--EGDSTPVAATN-QR------PSYTSFGGSGISLRGTAPTTDTDEDMEVRREKRRLAAMRRI 200          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|298712705|emb|CBJ48730.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 183.726 bits (465), Expect = 3.213e-54
Identity = 100/223 (44.84%), Postives = 137/223 (61.43%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSS--------GTRTAFSGEGV-------------RSGSKASGVPADKSEYERRERIRQATMTR 215
            T V LNVYDL   N + HP+G+GV+H+G+E+ G EYT+AGG GIF   PR APGA FRE++ +G+      +L RA+++LR +FGPD Y+++  NCN FS+AL  EL+GKPIP YVNRLA+ GS+FSC +P  M   APV+Q G+S+  A  S+    G SS        G+R AF G G+              S +  +G   +    +RRER+R A + R
Sbjct:    9 TEVTLNVYDLSPVNEFGHPIGLGVFHSGLEVDGREYTFAGGGGIFDHEPRKAPGARFREAVNMGSFTGGSSSLSRAIDSLREEFGPDRYNVLTRNCNSFSSALCEELVGKPIPGYVNRLAWMGSWFSCLMPPGMLGDAPVNQGGSSSYNAGYSMLAPPGRSSGPAAVRGGGSRNAFQGSGMTLAGSGGSAGTTSGSSTGGTGTGREGELSDRRERMRMAALRR 231          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|1173953042|gb|OQS00610.1| (hypothetical protein ACHHYP_03269 [Achlya hypogyna])

HSP 1 Score: 174.481 bits (441), Expect = 3.013e-51
Identity = 96/212 (45.28%), Postives = 128/212 (60.38%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVR-SGSKASGVPA---DKSEYERRERIRQATMTRLAGATE 221
            T V LNVYDL  AN Y H LG+G +H+GV++ G E+++AGGAGIF   P+ A GA FRESI +G    +    RRA+E LR DF  + Y+L+  NCN FS  + + LLG PIP+YVNR+A+ GSF SC LP E+T QAPV  EG++  A   S  R     + +  +F G G+  +GS     P+   D+    RRE+ R A M R   + E
Sbjct:    7 TAVILNVYDLMEANAYMHGLGLGAFHSGVDVGGDEFSFAGGAGIFTCRPKQADGAVFRESIHMGYFDGSSVDARRAIEDLRQDFQGNQYNLLTKNCNTFSNEVCLRLLGIPIPSYVNRIAYLGSFLSCLLPRELTGQAPV--EGDTPIACNHSSHR-----APSYKSFGGSGISLNGSVPKTTPSPATDEDAATRREKRRLAAMKRFEQSQE 211          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|1173948723|gb|OQR96821.1| (hypothetical protein THRCLA_07161 [Thraustotheca clavata])

HSP 1 Score: 172.94 bits (437), Expect = 1.179e-50
Identity = 94/214 (43.93%), Postives = 129/214 (60.28%), Query Frame = 0
Query:   14 TMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGN-----STGAAEPSVQRFIGTSSGTRTAFSGEGVR-SGSKASGVPADKSEYERRERIRQATMTRLAGATE 221
            T V LNVYDL  AN Y H LG G +H+G+++ G EY++AGGAGIF   P+ A GA FRESI +G    +    RR +E+LRSDF    Y+L+  NCN F+    ++LLG PIP+Y+NR+A+FGSF SC LP E+   APV  EG+     S   ++PS Q           A+ G G+  +G+ ++ +  D +E  RRE+ R A M RL  A +
Sbjct:    7 TAVILNVYDLMEANAYTHALGFGAFHSGLDVGGDEYSFAGGAGIFTCRPKQADGAVFRESIHMGYFDGSSMDARRVIESLRSDFQGSHYNLLTKNCNTFANEACLQLLGIPIPSYINRMAYFGSFLSCLLPKELAGNAPV--EGSTSLSYSNTPSQPSYQ-----------AYGGNGISLNGTSSATMTEDDAEI-RREKRRAAAMKRLESARQ 206          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|1210521944|dbj|GAX19379.1| (hypothetical protein FisN_4Lh358 [Fistulifera solaris])

HSP 1 Score: 170.629 bits (431), Expect = 1.333e-49
Identity = 99/230 (43.04%), Postives = 127/230 (55.22%), Query Frame = 0
Query:    1 MYKGNNGDSTGSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLA-FFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGSKAS--------GVPADKSEYERRERIRQATMTRLAGATE 221
            M KG++G  TG GT V LN+YDLH  N   H LG G+YH+GVEI+G+EY++A G GIF + P+ APGA FRE + +G        L RAL+ LR +FGPDDY   + NCNHFS AL   L+ K IP YVNR A     F  C LP    ++ P +   +S G A           S T   F G G + GS +S          P D +  +RRER R+A M RL  + +
Sbjct:    1 MPKGHSGSRTGFGTKVLLNIYDLHPQNESLHGLGFGIYHSGVEISGTEYSFANG-GIFEIPPKTAPGAKFREQVEVGLFEGGKDELNRALDLLRDEFGPDDYDGFRRNCNHFSNALCWRLVHKTIPPYVNRAAELLVCFCGCLLPSPRLAEGPST---DSNGGASSQFLLRKKDLSSTTPVFQGAGNKLGSPSSHSFLSGSQQQPEDLT--DRRERARKAAMARLGKSQQ 224          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|397596197|gb|EJK56708.1| (hypothetical protein THAOC_23353 [Thalassiosira oceanica])

HSP 1 Score: 166.392 bits (420), Expect = 1.175e-46
Identity = 94/231 (40.69%), Postives = 128/231 (55.41%), Query Frame = 0
Query:    3 KGNNGDSTGSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAFSGEGVRSGS---------------KASGVPADKSEYERRERIRQATMTRLAG 218
            +G  G  T  GT V LNVYDL  AN Y   +G+G++H+GVE+ G EY++A G G+F   P+ APGA FRESI LG        L  A+  LR +FGPD Y+L++ NCNHF+ ALV  LLG+ IP +VNRLA +G+  SC +P ++  +APV            S Q F      T   FSG G   G+               +AS   A +S  +RRE+ ++A + R+ G
Sbjct:   95 RGYEGGRTRMGTSVILNVYDLSPANEYLCSVGLGLHHSGVEVLGREYSFASGGGVFDSSPKEAPGAKFRESIELGHFEGGSAELNAAIGDLREEFGPDRYNLIRRNCNHFANALVWRLLGRTIPGHVNRLADYGNCCSCLIPRKLLEEAPVGP--GGGSGNGSSYQVFSPKKQDTPAVFSGSGHTLGAPSQEGRMSLLGSWRGRASQKKAQESLTDRREKAKRAALARMEG 323          
BLAST of EWM29734.1 vs. NCBI_GenBank
Match: gi|568059727|gb|ETM56297.1| (hypothetical protein L914_00704 [Phytophthora parasitica])

HSP 1 Score: 162.54 bits (410), Expect = 1.233e-46
Identity = 91/213 (42.72%), Postives = 120/213 (56.34%), Query Frame = 0
Query:   11 GSGTMVYLNVYDLHAANRYAHPLGMGVYHTGVEIAGSEYTYAGGAGIFAMYPRVAPGATFRESIPLGTVLDAPRALRRALEALRSDFGPDDYSLVKLNCNHFSAALVMELLGKPIPAYVNRLAFFGSFFSCFLPVEMTSQAPVSQEGNSTGAAEPSVQRFIGTSSGTRTAF-------SGEGVRSGSKASGVPADKSEYERRERIRQATMTRL 216
            G  T V LN+YDL  AN +  PLG G++H+GVEIAG E++YA GAG+F+  PR APGA FRESI +G      +   R   +L  DF  D Y+L   NCN ++ AL   LL KPIP YVNR A+ GSF SC +P ++T QAPV          +PS    I   +  R+ F       SG+ V S   AS      +  +RRE++R A + R+
Sbjct:    2 GPRTAVTLNIYDLVEANEFMAPLGFGIFHSGVEIAGEEFSYASGAGVFSSSPRQAPGAKFRESIDMGFFEGTSQEAHRLAYSLSPDFEGDAYNLFTRNCNTYADALCQLLLNKPIPGYVNRAAYLGSFLSCLMPADLTDQAPV---------GDPSTPSRITNGTPRRSGFIYTPFAGSGQTVGSTVDASSSSESSTLADRREKVRLAALRRM 205          
The following BLAST results are available for this feature:
BLAST of EWM29734.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112314|gb|EWM29734.1|1.040e-165100.00protein of unknown function DUF862, eukaryotic [Na... [more]
gi|813134393|ref|XP_012198138.1|4.335e-5547.29hypothetical protein SPRG_04142 [Saprolegnia paras... [more]
gi|813225908|ref|XP_012212031.1|9.083e-5546.80hypothetical protein SPRG_17305 [Saprolegnia paras... [more]
gi|669140320|ref|XP_008605728.1|1.105e-5449.26hypothetical protein SDRG_01949 [Saprolegnia dicli... [more]
gi|298712705|emb|CBJ48730.1|3.213e-5444.84conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173953042|gb|OQS00610.1|3.013e-5145.28hypothetical protein ACHHYP_03269 [Achlya hypogyna... [more]
gi|1173948723|gb|OQR96821.1|1.179e-5043.93hypothetical protein THRCLA_07161 [Thraustotheca c... [more]
gi|1210521944|dbj|GAX19379.1|1.333e-4943.04hypothetical protein FisN_4Lh358 [Fistulifera sola... [more]
gi|397596197|gb|EJK56708.1|1.175e-4640.69hypothetical protein THAOC_23353 [Thalassiosira oc... [more]
gi|568059727|gb|ETM56297.1|1.233e-4642.72hypothetical protein L914_00704 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna907rna907Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications