EWM21634.1, cds9057 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|585101889|gb|EWM21634.1| (dna polymerase mu [Nannochloropsis gaditana]) HSP 1 Score: 1284.24 bits (3322), Expect = 0.000e+0 Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0 Query: 1 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRARERDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 624 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRARERDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA Sbjct: 1 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRARERDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 624
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|585101888|gb|EWM21633.1| (dna polymerase mu [Nannochloropsis gaditana]) HSP 1 Score: 1279.23 bits (3309), Expect = 0.000e+0 Identity = 624/625 (99.84%), Postives = 624/625 (99.84%), Query Frame = 0 Query: 1 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRARE-RDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 624 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRARE RDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA Sbjct: 1 MKRKAASPRKTAAPFSSCFADTEVLILEDGGISPHDISPMRAGLLLKKIEQHGGTAEVIPANEVLEGRLRAREQRDSKLSRATHVVLSKSLEGKVPALVERLRREKNKDTNENGTIYAPLPLTVGRSCQVVSPDWVSDCLLHRQLVDPRPYLLSLDRAERNEGGDAYTEAATKREEAAEPTAGGTKKARLSHPSASTPTVVSPTHAAIEARLAPFSDLDPTTRDAFFAYGGPLVLSKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLHLSQQAVFRETKRLTNPKSIDGVFHSEEDVWEFLGLKYLPPRLRCA 625
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|299472566|emb|CBN80507.1| (DNA polymerase mu [Ectocarpus siliculosus]) HSP 1 Score: 182.57 bits (462), Expect = 2.549e-46 Identity = 134/422 (31.75%), Postives = 205/422 (48.58%), Query Frame = 0 Query: 243 PKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSM--EQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAG-------LR--------------------EEIKRIMQEDMGIDLL-------ILKEGNTMGGF----ASKPTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYADEQGLH-LSQQAVFRETKRLTNPKSIDGV-FHSEEDVWEFLGLKYLPPRLR 622 P +ACQRP P +H N +T + + + +MY + VGD +R +F R+ +VLR +R E++ + HVG M ++EIL TG RLE+L+ ++ L +VH VG TA+ WY G RSV + L ++ +G+E +RP++ E ++G+ + V + R +V + VRE A + R TLL + CGG+ RGK D DVLVS + G+ G LR E+++ E + L+ L +G MGGF + K+ + ++ L + G R+D++ QW F +LGWSG+ EKD+R Y +EQ + LSQ+ V T R T+ D V F +EED++ FLGL+Y+PP LR Sbjct: 187 PMYACQRPTPMKHHNHEITDVLDAMTKMYKV-VGDGQRADSFMRLSSVLRFLDRTIRSGSEIRHVHHVGERMVEAVDEILATGTLGRLEELKSHPRNQVCQQLMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGDE-----------------KRPNLKPEVVMGLKHFHDMQVPIGRDEVVGIADEVREEAERFGRERDPEG-TLLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVEALRALDGYLVEGEQIVGAEVKAFEDLEYFFVEGLKERLMERGKLCATLYQGQ-MGGFTKAKGGQAPQPKLEREEVLMALWQLPGRKCRIDIVQVASSQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGV---TIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLR 585
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|562876575|ref|XP_006166068.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X2 [Tupaia chinensis]) HSP 1 Score: 148.673 bits (374), Expect = 4.867e-35 Identity = 122/406 (30.05%), Postives = 192/406 (47.29%), Query Frame = 0 Query: 235 SKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQ----------EDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYR--RLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFR-ETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 S P + P +ACQRP P H N HL+ E L E G G + R +F R +VLRA P V +L+G+ ++GG V++E+L G C +E+++ ++ + +V VG TA +WY+ G R++ DL++ SQR + +Q G+ + + S + R AL+ +V A + L GA L GG+ RGK D D+L+S + + GL ++ +Q + G I+++G+TM F + L + G ++ R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ Q +F E KR VFH SEED++ LGLKYLPP R A Sbjct: 128 SPPGPSQMPVYACQRPTPLLHHNTHLSEALETLAEAAGFE-GSEGRLLSFRRAASVLRALPGPVTALSQLQGLPYLGGHSFRVVQELLEHGVCEEVERIQSSDRYQTMKLFTQVFGVGVKTANRWYQEGLRTL----DDLRK------------------------QSQRLTRQQRAGLQYHQDLSTPVQRPDAEALQQVVEVAVRQTLP----GATVTL---TGGFRRGKLQGHDVDLLISHPEEGQEVGLLPQLLLRLQDQGLLMYQQYQRGGEPSHIVRQGHTMDAFERS---------FCIFRLPQPPGAWKAVRVDLVVVPISQFPFALLGWTGSQLFERELRRFSHQERGLRLTSQGLFDPEQKR---------VFHATSEEDIFRHLGLKYLPPEQRNA 479
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|58865402|ref|NP_001011912.1| (DNA-directed DNA/RNA polymerase mu [Rattus norvegicus] >gi|51859148|gb|AAH81868.1| Polymerase (DNA directed), mu [Rattus norvegicus] >gi|149047644|gb|EDM00314.1| rCG35832 [Rattus norvegicus]) HSP 1 Score: 144.821 bits (364), Expect = 1.232e-33 Identity = 114/410 (27.80%), Postives = 187/410 (45.61%), Query Frame = 0 Query: 237 PFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLL-------------ILKEGNTMGGFASK------PTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFRETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 P S + P +ACQRP+P N L+ E L E G G + R F R ++L++ P+ V +L G+ + G VI+E+L G C +E++R H+ + + VG TA +WY+ G R++ +++ QR + +Q G+ + + S ++R + AL+ +V EAA++ + GA L GG+ RGK D D L++ + + GL + R +Q G+ L IL++ +TM F P ++ A + + R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ +F ++ FH SEEDV+ FLGLKYLPP R A Sbjct: 133 PISVTIPAYACQRPSPLTPHNTLLSEALETLAEAAGFE-GKEGRFLTFYRAASMLKSLPYPVTSLSQLHGLPYFGEHSFRVIQELLEHGTCEEVEQIRCSERHQTMKLFTHIFGVGVKTASRWYQEGLRTLDELREQ----------------------------PQRLTQQQKAGLQYYQDLSTPVSRAEAEALQQLV-EAAMREILP---GATVTL---TGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVMRCLQ-SQGLVLYHQYHRSHLADSAHILRQRSTMDAFERSFCILRLPQSQQAALEGPLHPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLCLNSHGLFDPERK--------TFFHATSEEDVFRFLGLKYLPPEQRNA 495
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|564384282|ref|XP_006251274.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X2 [Rattus norvegicus]) HSP 1 Score: 144.436 bits (363), Expect = 2.736e-33 Identity = 114/410 (27.80%), Postives = 187/410 (45.61%), Query Frame = 0 Query: 237 PFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLL-------------ILKEGNTMGGFASK------PTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFRETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 P S + P +ACQRP+P N L+ E L E G G + R F R ++L++ P+ V +L G+ + G VI+E+L G C +E++R H+ + + VG TA +WY+ G R++ +++ QR + +Q G+ + + S ++R + AL+ +V EAA++ + GA L GG+ RGK D D L++ + + GL + R +Q G+ L IL++ +TM F P ++ A + + R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ +F ++ FH SEEDV+ FLGLKYLPP R A Sbjct: 153 PISVTIPAYACQRPSPLTPHNTLLSEALETLAEAAGFE-GKEGRFLTFYRAASMLKSLPYPVTSLSQLHGLPYFGEHSFRVIQELLEHGTCEEVEQIRCSERHQTMKLFTHIFGVGVKTASRWYQEGLRTLDELREQ----------------------------PQRLTQQQKAGLQYYQDLSTPVSRAEAEALQQLV-EAAMREILP---GATVTL---TGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVMRCLQ-SQGLVLYHQYHRSHLADSAHILRQRSTMDAFERSFCILRLPQSQQAALEGPLHPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLCLNSHGLFDPERK--------TFFHATSEEDVFRFLGLKYLPPEQRNA 515
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|947333882|ref|XP_014438679.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X1 [Tupaia chinensis]) HSP 1 Score: 142.124 bits (357), Expect = 8.995e-33 Identity = 122/411 (29.68%), Postives = 192/411 (46.72%), Query Frame = 0 Query: 235 SKPFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQ----------EDMGIDLLILKEGNTMGGFASKPTHEKIASHDNMLTLIKHEGFYR--RLDVISPPPDQWAFCVLGWSGSKQ-----MEKDLRDYA-DEQGLHLSQQAVFR-ETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 S P + P +ACQRP P H N HL+ E L E G G + R +F R +VLRA P V +L+G+ ++GG V++E+L G C +E+++ ++ + +V VG TA +WY+ G R++ DL++ SQR + +Q G+ + + S + R AL+ +V A + L GA L GG+ RGK D D+L+S + + GL ++ +Q + G I+++G+TM F + L + G ++ R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ Q +F E KR VFH SEED++ LGLKYLPP R A Sbjct: 128 SPPGPSQMPVYACQRPTPLLHHNTHLSEALETLAEAAGFE-GSEGRLLSFRRAASVLRALPGPVTALSQLQGLPYLGGHSFRVVQELLEHGVCEEVERIQSSDRYQTMKLFTQVFGVGVKTANRWYQEGLRTL----DDLRK------------------------QSQRLTRQQRAGLQYHQDLSTPVQRPDAEALQQVVEVAVRQTLP----GATVTL---TGGFRRGKLQGHDVDLLISHPEEGQEVGLLPQLLLRLQDQGLLMYQQYQRGGEPSHIVRQGHTMDAFERS---------FCIFRLPQPPGAWKAVRVDLVVVPISQFPFALLGWTGSQVPFPQLFERELRRFSHQERGLRLTSQGLFDPEQKR---------VFHATSEEDIFRHLGLKYLPPEQRNA 484
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|564384286|ref|XP_006251276.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X4 [Rattus norvegicus]) HSP 1 Score: 140.969 bits (354), Expect = 1.265e-32 Identity = 113/410 (27.56%), Postives = 187/410 (45.61%), Query Frame = 0 Query: 237 PFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLL-------------ILKEGNTMGGFASK------PTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFRETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 P S + P +ACQRP+P N L+ E L E G G + R F R ++L++ P+ V +L G+ + G VI+E+L G C +E++R H+ + + VG TA +WY+ G R++ +++ +R +Q+ G+ + + S ++R + AL+ +V EAA++ + GA L GG+ RGK D D L++ + + GL + R +Q G+ L IL++ +TM F P ++ A + + R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ +F ++ FH SEEDV+ FLGLKYLPP R A Sbjct: 71 PISVTIPAYACQRPSPLTPHNTLLSEALETLAEAAGFE-GKEGRFLTFYRAASMLKSLPYPVTSLSQLHGLPYFGEHSFRVIQELLEHGTCEEVEQIRCSERHQTMKLFTHIFGVGVKTASRWYQEGLRTLDELREQPQR------------------------LTQQQKAVLPTGLQYYQDLSTPVSRAEAEALQQLV-EAAMREILP---GATVTL---TGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVMRCLQ-SQGLVLYHQYHRSHLADSAHILRQRSTMDAFERSFCILRLPQSQQAALEGPLHPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLCLNSHGLFDPERK--------TFFHATSEEDVFRFLGLKYLPPEQRNA 437
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|564384284|ref|XP_006251275.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X3 [Rattus norvegicus]) HSP 1 Score: 141.739 bits (356), Expect = 1.768e-32 Identity = 113/410 (27.56%), Postives = 187/410 (45.61%), Query Frame = 0 Query: 237 PFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLL-------------ILKEGNTMGGFASK------PTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFRETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 P S + P +ACQRP+P N L+ E L E G G + R F R ++L++ P+ V +L G+ + G VI+E+L G C +E++R H+ + + VG TA +WY+ G R++ +++ +R +Q+ G+ + + S ++R + AL+ +V EAA++ + GA L GG+ RGK D D L++ + + GL + R +Q G+ L IL++ +TM F P ++ A + + R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ +F ++ FH SEEDV+ FLGLKYLPP R A Sbjct: 133 PISVTIPAYACQRPSPLTPHNTLLSEALETLAEAAGFE-GKEGRFLTFYRAASMLKSLPYPVTSLSQLHGLPYFGEHSFRVIQELLEHGTCEEVEQIRCSERHQTMKLFTHIFGVGVKTASRWYQEGLRTLDELREQPQR------------------------LTQQQKAVLPTGLQYYQDLSTPVSRAEAEALQQLV-EAAMREILP---GATVTL---TGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVMRCLQ-SQGLVLYHQYHRSHLADSAHILRQRSTMDAFERSFCILRLPQSQQAALEGPLHPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLCLNSHGLFDPERK--------TFFHATSEEDVFRFLGLKYLPPEQRNA 499
BLAST of EWM21634.1 vs. NCBI_GenBank
Match: gi|564384280|ref|XP_006251273.1| (PREDICTED: DNA-directed DNA/RNA polymerase mu isoform X1 [Rattus norvegicus]) HSP 1 Score: 141.739 bits (356), Expect = 2.240e-32 Identity = 113/410 (27.56%), Postives = 187/410 (45.61%), Query Frame = 0 Query: 237 PFSASFPKFACQRPAPAQHPNRHLTPLFEDLVEMYGLGVGDKERETAFGRVLAVLRAWPWKVRESKELKGIRHVGGSMRAVIEEILMTGRCSRLEKLREDSSHRCLLDLCRVHQVGHATARKWYEAGYRSVAQIQADLKRAEETGDGEEQAGGEVERYLGSTFCTSQRPSMEQLLGILFVDEYSVKMTRCQVAALEGIVREAALKALAARGLGAETLLLQTCGGYLRGKALNGDADVLVSCTQAQGQAGLREEIKRIMQEDMGIDLL-------------ILKEGNTMGGFASK------PTHEKIASHDNMLTLIKHEGFYRRLDVISPPPDQWAFCVLGWSGSKQMEKDLRDYA-DEQGLHLSQQAVFRETKRLTNPKSIDGVFH--SEEDVWEFLGLKYLPPRLRCA 624 P S + P +ACQRP+P N L+ E L E G G + R F R ++L++ P+ V +L G+ + G VI+E+L G C +E++R H+ + + VG TA +WY+ G R++ +++ +R +Q+ G+ + + S ++R + AL+ +V EAA++ + GA L GG+ RGK D D L++ + + GL + R +Q G+ L IL++ +TM F P ++ A + + R+D++ P Q+ F +LGW+GS+ E++LR ++ E+GL L+ +F ++ FH SEEDV+ FLGLKYLPP R A Sbjct: 153 PISVTIPAYACQRPSPLTPHNTLLSEALETLAEAAGFE-GKEGRFLTFYRAASMLKSLPYPVTSLSQLHGLPYFGEHSFRVIQELLEHGTCEEVEQIRCSERHQTMKLFTHIFGVGVKTASRWYQEGLRTLDELREQPQR------------------------LTQQQKAVLPTGLQYYQDLSTPVSRAEAEALQQLV-EAAMREILP---GATVTL---TGGFRRGKLQGHDVDFLITHPEEGQEVGLLPRVMRCLQSQ-GLVLYHQYHRSHLADSAHILRQRSTMDAFERSFCILRLPQSQQAALEGPLHPCPTWKAV--RVDLVVTPNSQFPFALLGWTGSQFFERELRRFSRQEKGLCLNSHGLFDPERK--------TFFHATSEEDVFRFLGLKYLPPEQRNA 519 The following BLAST results are available for this feature:
BLAST of EWM21634.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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