EWM21585.1, cds9052 (CDS) Nannochloropsis gaditana

Overview
NameEWM21585.1
Unique Namecds9052
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:291266..291268 +
Alignment locationKK037251.1:291350..291482 +
Alignment locationKK037251.1:291680..292008 +
Alignment locationKK037251.1:292150..292698 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21585.1
ProductWD40-repeat-containing protein
Orig transcript idgnl|cribi|Naga_100012g34.1917.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:291266..291268 +
KK037251.1supercontigKK037251.1:291350..291482 +
KK037251.1supercontigKK037251.1:291680..292008 +
KK037251.1supercontigKK037251.1:292150..292698 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR027525eIF3i
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|585101840|gb|EWM21585.1| (WD40-repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVPEEY 337
            MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVPEEY
Sbjct:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVPEEY 337          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|1210526995|dbj|GAX14322.1| (translation initiation factor 3 subunit I [Fistulifera solaris])

HSP 1 Score: 388.267 bits (996), Expect = 1.437e-131
Identity = 190/337 (56.38%), Postives = 239/337 (70.92%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIE---IRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVP 334
            MR  +++GHER IT V FN DGDLLF+A+ D  P+VW  E GERLGTYNGH G++ D+     + RL+TAS D   +LW V+TGE +  + H GPVRG  WAEG + F T+ DPFV H AKI VF APED DP + S TP + IE   I  +  KPT V+WT  NEDLLVA++NG +R YDP+TG+ +         HE+KIN + ++++K  FIT+S D+ S L D   L  L+ Y+TDRPVN AVIS  KDH+LLGGGQEA SVTTT G+ GKFETRFF+ +YE+EFG VKGHFGPI A+DI+P+G ++ SG+ DGYVRLHFFD DYL  +D VP
Sbjct:    1 MRPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHRGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYSETPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETGDLK----EEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLTHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGKVGKFETRFFNLVYEDEFGIVKGHFGPINALDINPNGRSYASGAEDGYVRLHFFDKDYLEKKDPVP 333          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|1210521256|dbj|GAX20004.1| (translation initiation factor 3 subunit I [Fistulifera solaris])

HSP 1 Score: 387.497 bits (994), Expect = 3.188e-131
Identity = 189/337 (56.08%), Postives = 239/337 (70.92%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIE---IRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVP 334
            MR  +++GHER IT V FN DGDLLF+A+ D  P+VW  E GERLGTYNGH G++ D+     + RL+TAS D   +LW V+TGE +  + H GPVRG  WAEG + F T+ DPFV H AKI VF APED DP + +  P + IE   I  +  KPT V+WT  NEDLLVA++NG +R YDP+TG+ +         HE+KIN + ++++K  FIT+S D+ S L D   LK L+ Y+TDRPVN AVIS  KDH+LLGGGQEA SVTTT G+ GKFETRFF+ +YE+EFG VKGHFGPI A+DI+P+G ++ SG+ DGYVRLHFFD DYL  +D VP
Sbjct:    1 MRPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETGDLK----EEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLKHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGKVGKFETRFFNLVYEDEFGIVKGHFGPINALDINPNGRSYASGAEDGYVRLHFFDKDYLEKKDPVP 333          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|223993073|ref|XP_002286220.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977535|gb|EED95861.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 370.163 bits (949), Expect = 8.187e-125
Identity = 182/334 (54.49%), Postives = 233/334 (69.76%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEI-RNREEK---PTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMR 330
            MR +++KGHER+IT V FN DGDLLF+ + D  P+VW +E GERLGT+NGH G+I D+ V   S R+VTAS D   KLW  +TGE L T+ H GPVRGA +A+G   FAT+ DPFV HNA+I V+  PE+ DP + S TP + IE+ +N + K    T + W   NE L V ++NG +R YDP TGEE          HE+KIN ++++  K  FIT+S D+ + L D   L+ L+ Y+TDRPVN AVIS  KDH+LLGGGQEA SVTTT G+ GKFETRFFH +YEEEFG VKGHFGPI A+ I+P+G  + SG+ DGY+RLH+FD  YL M+
Sbjct:    1 MRPILLKGHERSITVVKFNHDGDLLFTGSKDHVPSVWRSENGERLGTFNGHKGTIWDLDVCRFSKRVVTASADAMAKLWDCETGECLKTFVHHGPVRGAAFADGSNMFATISDPFVEHNAQISVYDIPENDDPSTYSDTPRLEIELPKNSDGKRVNATNIVWLNLNEALFVTFDNGSIRLYDPVTGEEL----DEFFPHEKKINRVSFNLDKTLFITSSADFTAKLYDVVDLRHLKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGTVKGHFGPINAIAINPNGRCYASGAEDGYIRLHYFDKSYLDMK 330          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|1072226136|gb|OEU10880.1| (WD40 repeat-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 361.303 bits (926), Expect = 7.253e-121
Identity = 179/341 (52.49%), Postives = 233/341 (68.33%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPE---DADPESLSPTPEVLIEIRN-REEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTG--EERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVPE 335
            MR  +++GHER IT + +N DGDLLFSA+ D+ P +W  E GERLGT++GH G++ D+     S +L+TAS D  VKLW +Q+G+   T+TH GPVRG  W+E  ++FAT+ DPFV HNAKI +F   E   ++D + L P  E+ +   N R  + T + WT  NE LL+A++NG VR Y+P TG  EE        ++H++KIN +  ++ K  FIT+S D+ S L D   LK L+ Y TDRPVN AVIS  KDH+LLGGGQEA SVTTT G+ GKFETRFF  +YE EFG VKGHFGPI A+ I+P+G  + SG+ DGYVRLHFFD  YL M+D VPE
Sbjct:    1 MRPYLLQGHERPITVIKYNYDGDLLFSASKDQIPCIWRVENGERLGTFHGHKGTVWDLDCDRFSKQLLTASADATVKLWNIQSGDLQHTFTHRGPVRGVAWSEDNKKFATISDPFVEHNAKITIFDTAELDGESDEDDLEPLLEIDVPKENSRRVQMTNISWTALNEHLLIAFDNGIVRLYNPTTGTIEEEI------RVHDKKINRLQLNQSKSLFITSSADFTSKLYDTANLKHLKTYTTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFELVYETEFGSVKGHFGPINALAINPNGRNYASGAEDGYVRLHFFDKSYLDMKDPVPE 335          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|219126854|ref|XP_002183663.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404900|gb|EEC44845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 359.762 bits (922), Expect = 1.268e-120
Identity = 177/336 (52.68%), Postives = 229/336 (68.15%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYLFMRDEVPEE 336
            MR  +++GHER IT + FN DGDLLFSA+ D  P+VW  + GERLGT+NGH G++ D+     + RL+TAS D   +LWK +TGE L  + H GPVRG  WAEG  +FAT+ DPFV HN+KI+VF  PE+ D          L +I  +   PT + WT  NEDLLVA++NG +R YDP+TG+ +       + H++KIN + +++ K  FIT+S D+ S L D   LK L+ Y+TDRPVN AVIS  KDH+L+GGGQ+A SVTTT G+ GKFETRFF+ +YE+EFG VKGHFGPI A        ++ SG+ DGYVRLH FD DYL M+D VPEE
Sbjct:    1 MRPYLLQGHERPITTIKFNYDGDLLFSASKDLVPSVWRADNGERLGTFNGHKGTVWDLDCDRFTTRLLTASADATCRLWKCETGECLFVFNHRGPVRGVAWAEGSRKFATISDPFVEHNSKIRVFDCPENGDLTDDDVMEIDLPKIGGKRVNPTNIQWTGNNEDLLVAFDNGEIRLYDPETGDLK----EEIQAHDKKINRLRFNRDKTLFITSSADFTSKLFDPVDLKHLKTYRTDRPVNDAVISNKKDHILVGGGQDAMSVTTTSGKVGKFETRFFNMVYEDEFGSVKGHFGPINAC------RSYASGAEDGYVRLHLFDKDYLDMKDPVPEE 326          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|695461800|ref|XP_009538303.1| (hypothetical protein PHYSODRAFT_551045 [Phytophthora sojae] >gi|348666579|gb|EGZ06406.1| hypothetical protein PHYSODRAFT_551045 [Phytophthora sojae])

HSP 1 Score: 335.109 bits (858), Expect = 5.424e-111
Identity = 160/327 (48.93%), Postives = 221/327 (67.58%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYL 327
            MR +++KGH R++T + +NR+GDLLFS A D TP +W ++TGER+GTY GHSG++    VS++S RL+TA+ D  VKLW VQTGEEL ++ H+GP R   +A G ++F +V D F    A + V+    D   +S  P   + I     E + T  YWT  NE ++    +G ++ +DP+TGE       S  +H  +I  + ++K K   IT+S D  + L+D +T+KVL+VY+TDRPVN A ISPIK+HV+LGGGQEA SVTTT G+ GKFE RFFH +++EEFGRVKGHFGPI  +   P+G ++ SG+ DGYVRLH FD+DYL
Sbjct:    1 MRPILLKGHSRSLTMIKYNREGDLLFSCAKDHTPNLWYSDTGERIGTYVGHSGAVWACDVSYHSERLLTAAADASVKLWDVQTGEELFSFQHTGPARSVNFATGDKKFVSVADKFSDRPAAVFVYELAADLAQQSAEPV--LTIANHGHEGRITGAYWTPLNEAIMTTGGDGCIKLFDPQTGELL----ESHDIHTGEITNVAFNKTKTLAITSSKDNTAKLLDVETMKVLKVYETDRPVNSAAISPIKEHVVLGGGQEAMSVTTTSGRVGKFEARFFHMVFQEEFGRVKGHFGPINTIAFHPNGKSYASGAEDGYVRLHHFDNDYL 321          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|301101417|ref|XP_002899797.1| (eukaryotic translation initiation factor 3 subunit, putative [Phytophthora infestans T30-4] >gi|262102799|gb|EEY60851.1| eukaryotic translation initiation factor 3 subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 328.946 bits (842), Expect = 1.378e-108
Identity = 157/327 (48.01%), Postives = 220/327 (67.28%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYL 327
            MR +++KGH R++T + +NR+GDLLFS A D TP +W ++TGER+GTY GHSG++    VS++S RL+TA+ D  VKLW VQ+GEEL ++ H+GP R   ++ G + F +V D F    A + V+   +D   +S  P   + I     E + T  YW   N+ ++    +G ++ +DPKTG+       S  +H  +I  + ++K K   IT+S D  + L+D +TLKVL+VY+TDRPVN A ISPIK+HV+LGGGQEA SVTTT G+ GKFE RFFH +++EEFGRVKGHFGPI  +   P+G ++ SG+ DGYVRLH FD+DYL
Sbjct:    1 MRPILLKGHSRSLTMIKYNREGDLLFSCAKDHTPNLWYSDTGERIGTYVGHSGAVWACDVSYHSERLLTAAADATVKLWDVQSGEELFSFPHTGPARSVNFSTGDKYFVSVADKFSDRPAAVYVYELADDVANQSAEPV--LTITNHGHEGRITGAYWMPLNKAIMTTGGDGTIKLFDPKTGQLL----ESYVIHTGEITNVAFNKSKTLAITSSKDNTAKLLDVETLKVLKVYETDRPVNSAAISPIKEHVVLGGGQEAMSVTTTSGRVGKFEARFFHMVFQEEFGRVKGHFGPINTIAFHPNGKSYASGAEDGYVRLHHFDNDYL 321          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|675190547|ref|XP_008904158.1| (hypothetical protein PPTG_10533 [Phytophthora parasitica INRA-310] >gi|566025529|gb|ETI48440.1| hypothetical protein F443_07533 [Phytophthora parasitica P1569] >gi|567962867|gb|ETK88380.1| hypothetical protein L915_07354 [Phytophthora parasitica] >gi|567991575|gb|ETL41778.1| hypothetical protein L916_07299 [Phytophthora parasitica] >gi|568020818|gb|ETL94935.1| hypothetical protein L917_07189 [Phytophthora parasitica] >gi|568051264|gb|ETM48172.1| hypothetical protein L914_07247 [Phytophthora parasitica] >gi|568095635|gb|ETN10397.1| hypothetical protein PPTG_10533 [Phytophthora parasitica INRA-310] >gi|570952975|gb|ETP18232.1| hypothetical protein F441_07512 [Phytophthora parasitica CJ01A1] >gi|570987449|gb|ETP46176.1| hypothetical protein F442_07542 [Phytophthora parasitica P10297] >gi|970658568|gb|KUF96314.1| hypothetical protein AM588_10009460 [Phytophthora nicotianae] >gi|970663713|gb|KUG00812.1| Eukaryotic translation initiation factor 3 subunit I [Phytophthora nicotianae])

HSP 1 Score: 328.176 bits (840), Expect = 2.956e-108
Identity = 157/327 (48.01%), Postives = 219/327 (66.97%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYL 327
            MR +++KGH R++T + +NR+GDLLFS A D TP +W ++TGER+GTY GHSG++    VS++S RL+TA+ D  VKLW VQTGEEL ++ H+GP R   ++ G + F +V D F    A + V+   +D   +S  P   + I     E + T  YW   N+ ++    +G ++ +DP TG+       S  +H  +I  + ++K K   IT+S D  + L+D +TLKVL+VY+TDRPVN A ISPIK+HV+LGGGQEA SVTTT G+ GKFE RFFH +++EEFGRVKGHFGPI  +   P+G ++ SG+ DGYVRLH FD+DYL
Sbjct:    1 MRPILLKGHSRSLTMIKYNREGDLLFSCAKDHTPNLWYSDTGERIGTYVGHSGAVWACDVSYHSERLLTAAADATVKLWDVQTGEELFSFPHTGPARSVNFSTGDKYFVSVADKFSDRPAAVYVYELADDVANQSAEPV--LTITNHGHEGRITGAYWMPLNKAIMTTGGDGTIKLFDPTTGQLL----ESHDIHTGEITNVAFNKTKTLAITSSKDNTAKLLDVETLKVLKVYETDRPVNSAAISPIKEHVVLGGGQEAMSVTTTSGRVGKFEARFFHMVFQEEFGRVKGHFGPINTIAFHPNGKSYASGAEDGYVRLHHFDNDYL 321          
BLAST of EWM21585.1 vs. NCBI_GenBank
Match: gi|570329270|gb|ETO77218.1| (hypothetical protein F444_07544 [Phytophthora parasitica P1976])

HSP 1 Score: 327.791 bits (839), Expect = 3.924e-108
Identity = 157/327 (48.01%), Postives = 219/327 (66.97%), Query Frame = 0
Query:    1 MRVMVMKGHERNITRVLFNRDGDLLFSAASDKTPTVWDTETGERLGTYNGHSGSITDMSVSWNSNRLVTASGDCQVKLWKVQTGEELLTYTHSGPVRGAQWAEGGERFATVCDPFVSHNAKIQVFYAPEDADPESLSPTPEVLIEIRNREEKPTKVYWTQFNEDLLVAYENGWVRKYDPKTGEERTGEGSSAKLHEEKINAITWDKQKICFITASNDYRSCLVDAKTLKVLRVYQTDRPVNGAVISPIKDHVLLGGGQEAQSVTTTRGQAGKFETRFFHSIYEEEFGRVKGHFGPITAVDISPDGLAFVSGSFDGYVRLHFFDDDYL 327
            MR +++KGH R++T + +NR+GDLLFS A D TP +W ++TGER+GTY GHSG++    VS++S RL+TA+ D  VKLW VQTGEEL ++ H+GP R   ++ G + F +V D F    A + V+   +D   +S  P   + I     E + T  YW   N+ ++    +G ++ +DP TG+       S  +H  +I  + ++K K   IT+S D  + L+D +TLKVL+VY+TDRPVN A ISPIK+HV+LGGGQEA SVTTT G+ GKFE RFFH +++EEFGRVKGHFGPI  +   P+G ++ SG+ DGYVRLH FD+DYL
Sbjct:    1 MRPILLKGHSRSLTMIKYNREGDLLFSCAKDHTPNLWYSDTGERIGTYVGHSGAVWACDVSYHSERLLTAAADATVKLWDVQTGEELFSFPHTGPARSVNFSTGDKYFVSVADKFSDRPAAVYVYELADDVANQSAEPV--LTITNHGHEGRITGAYWMPLNKAIMTTGGDGTIKLFDPTTGQLL----ESHDIHTGEITNVAFNKTKTLAITSSKDNTAKLLDIETLKVLKVYETDRPVNSAAISPIKEHVVLGGGQEAMSVTTTSGRVGKFEARFFHMVFQEEFGRVKGHFGPINTIAFHPNGKSYASGAEDGYVRLHHFDNDYL 321          
The following BLAST results are available for this feature:
BLAST of EWM21585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101840|gb|EWM21585.1|0.000e+0100.00WD40-repeat-containing protein [Nannochloropsis ga... [more]
gi|1210526995|dbj|GAX14322.1|1.437e-13156.38translation initiation factor 3 subunit I [Fistuli... [more]
gi|1210521256|dbj|GAX20004.1|3.188e-13156.08translation initiation factor 3 subunit I [Fistuli... [more]
gi|223993073|ref|XP_002286220.1|8.187e-12554.49predicted protein, partial [Thalassiosira pseudona... [more]
gi|1072226136|gb|OEU10880.1|7.253e-12152.49WD40 repeat-like protein [Fragilariopsis cylindrus... [more]
gi|219126854|ref|XP_002183663.1|1.268e-12052.68predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|695461800|ref|XP_009538303.1|5.424e-11148.93hypothetical protein PHYSODRAFT_551045 [Phytophtho... [more]
gi|301101417|ref|XP_002899797.1|1.378e-10848.01eukaryotic translation initiation factor 3 subunit... [more]
gi|675190547|ref|XP_008904158.1|2.956e-10848.01hypothetical protein PPTG_10533 [Phytophthora para... [more]
gi|570329270|gb|ETO77218.1|3.924e-10848.01hypothetical protein F444_07544 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9082rna9082Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications