EWM21650.1, cds9045 (CDS) Nannochloropsis gaditana

Overview
NameEWM21650.1
Unique Namecds9045
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:276678..276915 +
Alignment locationKK037251.1:277133..278562 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21650.1
Productfad-dependent pyridine nucleotide-disulfide oxidoreductase
Orig transcript idgnl|cribi|Naga_100012g27.1982.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:276678..276915 +
KK037251.1supercontigKK037251.1:277133..278562 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
IPR001327Pyr_OxRdtase_NAD-bd_dom
Homology
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|585101905|gb|EWM21650.1| (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 1103.97 bits (2854), Expect = 0.000e+0
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0
Query:    1 MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAWAKGRTAKVKGAFQEAFAEGNVWQK 555
            MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAWAKGRTAKVKGAFQEAFAEGNVWQK
Sbjct:    1 MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAWAKGRTAKVKGAFQEAFAEGNVWQK 555          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|553183170|ref|XP_005853852.1| (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295211|gb|EKU22510.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 327/340 (96.18%), Postives = 327/340 (96.18%), Query Frame = 0
Query:    1 MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVV 340
            MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSK             GLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVV
Sbjct:    1 MEDAAMNADTDVGKGLKPLGRRGRTHSRAGACTSFLASVVAFLLADSGTAFMPLRVIKSHTRAVTTPSICMSIESSSSK-------------GLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVV 327          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|516255932|ref|WP_017659895.1| (NADH dehydrogenase family protein [Geitlerinema sp. PCC 7105])

HSP 1 Score: 263.077 bits (671), Expect = 6.002e-79
Identity = 176/455 (38.68%), Postives = 247/455 (54.29%), Query Frame = 0
Query:   81 KP-QVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSP---SSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            KP ++V+ GGGFGGLY+AL LS L       P   +ITLVDR+DRFVF PLLYEL   +    E+AP F  LLA+T I+F Q  V++IDL    V +   G+                  SL YD+LVLA+G              E  L+ +P      +PF T+ DA+ +R +L ++++ S     R  +VGGGYSGVE+A  LA RLG ++GR+ +V+R   IL NSP   R +A + L + GV + L  DV +V                   AE      RE    +P DLV+WT G  V+PVV ++   +++ RG+++T+  L+ +     ++ VGD AA     G           Q +P+TAQ AFQ+++ AAWN+W SLT     P R+Q   LGEM+TLG  +AT+SGL    +L+GP A +ARRL Y+ R+PT   +LK    W
Sbjct:    4 KPARIVILGGGFGGLYTALNLSRLPWTPAEKP---EITLVDRNDRFVFAPLLYELVTDELQTWEIAPPFVELLANTEIQFRQASVKSIDLDSHQVHLDDDGD------------------SLPYDRLVLAMG-------------GETPLNGTPGVAERAIPFRTVADAYRVRERLRQLES-SDADKIRVAIVGGGYSGVEIACKLADRLG-NRGRIRIVDRNDTILRNSPEFNRNAAKRALSDRGVWLDLETDVTQV------------------TAETISLKYREQIDEIPVDLVLWTVGTTVAPVVRSLP-FDRNDRGQILTNAKLQVIDRPH-IFAVGDVAATYDING-----------QRVPTTAQAAFQQADYAAWNVWGSLTHRPLLPFRYQN--LGEMMTLGLDNATLSGLG--LSLDGPLAHIARRLAYLYRLPTPEHQLKVGLNW 387          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|494594480|ref|WP_007353046.1| (MULTISPECIES: NADH dehydrogenase family protein [Kamptonema] >gi|300338249|emb|CBN53819.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [[Oscillatoria] sp. PCC 6506])

HSP 1 Score: 262.692 bits (670), Expect = 8.811e-79
Identity = 179/457 (39.17%), Postives = 249/457 (54.49%), Query Frame = 0
Query:   78 SKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVML--GVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEV-VLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            ++ +P++ + GGGFGGLY+ALRLS+L       P   +I LVDR DRF+F PLLYE+  G+    E+AP FE LL  TGIRF QG V AID+  K VQ+Q   E T                    D+LVLALG E         PL+   +S +     PF T+ DA+ L  +L RI   S     R  VVGGGYSGVELA  L+ RLG ++GR+ L+E+  +IL  SP   R +A   LE+  V + L   VD +E D   +V +                     G++ +LP D V+WT G  VSP+V ++  L+++ RG+L+ +  L+ + + G ++ +GD    +   G           Q +PS+AQVAFQ+++  AWN+W+SLT     P R+Q  PLGEMLTLG  +AT +GL     L+G  A +ARRL Y+ RMPT   ++K    W
Sbjct:    2 TQQQPRICILGGGFGGLYTALRLSQLPFAKPQKP---EIILVDRCDRFLFSPLLYEILTGELQTWEIAPPFEELLKDTGIRFCQGTVAAIDITEKRVQLQDGPEIT-------------------CDRLVLALGGET--------PLN--LVSGAAEHAFPFRTISDAYRLEERL-RILESSQSDKIRVAVVGGGYSGVELACKLSDRLG-ERGRLRLIEQSDKILQTSPDFNREAANIALEKRRVWIDLETSVDAIESDTISLVYK---------------------GQIDILPVDAVLWTVGMIVSPMVRSLH-LQQNIRGQLIVEPTLQVVDNPG-IFALGDITECVDADG-----------QKVPSSAQVAFQQADYTAWNIWASLTDRPLLPFRYQ--PLGEMLTLGVDNATFAGLG--IKLDGQMAHVARRLAYLYRMPTLDHQIKVGFNW 386          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|653155042|ref|WP_027404058.1| (NADH dehydrogenase family protein [Aphanizomenon flos-aquae])

HSP 1 Score: 260.766 bits (665), Expect = 4.501e-78
Identity = 172/455 (37.80%), Postives = 247/455 (54.29%), Query Frame = 0
Query:   78 SKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSP-SPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            ++   ++ + GGGFGGLY+ALRLS+L   S    P  +I LVD+ DRFVF PLLYEL   +    E+AP +  LL  TGI+F Q  V  ID++ + VQ+Q + E                   L YD+LVLALG EP L            L P + +   PF T+ DA+ L  +L  ++A + P   R  +VG GYSGVELA  LA R+G +KGR  L+E   QIL  SP   R +A K L+ +GV + L   V  ++   + +       + K   +            +P DLV+WT G +VSPVV A+  L+ + RG++ T   L+A+    +++ +GD A  +   G          +QV P+TAQVAFQ+++  AWN+W+++T     P R+Q  PLGEM+ LG  +AT++GL     L+G  A LARRL Y+ R+PT + +LK    W
Sbjct:    2 TQATTKICILGGGFGGLYTALRLSQLPWEST---PKPEIILVDQSDRFVFSPLLYELLTRELQTWEIAPPYSELLQGTGIQFHQAAVSTIDISKQTVQLQDKSE-------------------LNYDRLVLALGGEPPL-----------DLVPGAATHAYPFRTIIDAYKLEERLRTLEA-AKPEKIRVAIVGAGYSGVELACKLADRIG-EKGRFRLIELSDQILRTSPEFNREAAKKALDSKGVFIDLETKVAAINQDSISL-------EYKNQVD-----------TIPVDLVIWTVGTKVSPVVTALP-LKHNQRGQITTTAQLQAI-EHPEIFALGDLADCLDAEG----------KQV-PATAQVAFQQADYTAWNIWATITNRPLLPFRYQ--PLGEMMALGIDNATLTGLG--VQLDGSVAYLARRLAYLYRLPTLNHQLKVGFNW 386          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|1027784848|ref|WP_063716209.1| (NADH dehydrogenase family protein [Leptolyngbya valderiana] >gi|1025913579|gb|OAB62095.1| NADH dehydrogenase [Leptolyngbya valderiana BDU 20041])

HSP 1 Score: 260.381 bits (664), Expect = 6.002e-78
Identity = 175/455 (38.46%), Postives = 246/455 (54.07%), Query Frame = 0
Query:   81 KP-QVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSP---SSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            KP ++V+ GGGFGGLY+AL LS L       P   +ITLVDR+DRFVF PLLYEL   +    E+AP F  LLA+T I+F Q  V++IDL    V +   G+                  SL YD+LVLA+G              E  L+ +P      +PF T+ DA+ +R +L ++++ S     R  +VGGGYSGVE+A  LA RL  ++GR+ +V+R   IL NSP   R +A + L + GV + L  DV +V                   AE      RE    +P DLV+WT G  V+PVV ++   +++ RG+++T+  L+ +     ++ VGD AA     G           Q +P+TAQ AFQ+++ AAWN+W SLT     P R+Q   LGEM+TLG  +AT+SGL    +L+GP A +ARRL Y+ R+PT   +LK    W
Sbjct:    4 KPARIVILGGGFGGLYTALNLSRLPWTPAEKP---EITLVDRNDRFVFAPLLYELVTDELQTWEIAPPFVELLANTEIQFRQASVKSIDLDSHQVHLDDDGD------------------SLPYDRLVLAMG-------------GETPLNGTPGVAERAIPFRTVADAYRVRERLRQLES-SDADKIRVAIVGGGYSGVEIACKLADRL-ENRGRIRIVDRNDTILRNSPEFNRNAAKRALSDRGVWLDLETDVTQV------------------TAETISLKYREQIDEIPVDLVLWTVGTTVAPVVRSLP-FDRNDRGQILTNAKLQVVDRPH-IFAVGDVAATYDING-----------QRVPTTAQAAFQQADYAAWNVWGSLTHRPLLPFRYQN--LGEMMTLGLDNATLSGLG--LSLDGPLAHIARRLAYLYRLPTPEHQLKVGLNW 387          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|1039165325|gb|OBQ10638.1| (NADH dehydrogenase [Anabaena sp. AL09])

HSP 1 Score: 259.996 bits (663), Expect = 8.176e-78
Identity = 173/449 (38.53%), Postives = 248/449 (55.23%), Query Frame = 0
Query:   83 QVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            ++ + GGGFGGLY+ALRLS+L   S    P  +I LVD+ DRFVF PLLYEL   +    E+AP +  LL  TGI+F Q  V  ID++ + VQ+Q + E                   L YD+LVLALG E        L L  G++    +   PF T+ DA+ L  +L RI   ++P   R  +VG GYSGVELA  LA R+G +KGR  L+E   QIL  SP   R +A K L+ +GV + L   V  +D   + +       + K   +            +P D+V+WT G +VSPVV A+  L+++ RG++ T   L+A+    +++ +GD A  +            E +QV P+TAQVAFQ+++  AWN+W+++T     P R+Q  PLGEM+ LG  +AT++GL G+  L+G  A LARRL Y+ R+PT + +LK    W
Sbjct:    7 KICILGGGFGGLYTALRLSQLPWEST---PKPEIILVDQSDRFVFSPLLYELLTRELQTWEIAPPYSELLQGTGIQFHQAAVSTIDISKQTVQLQDKSE-------------------LNYDRLVLALGGE------TPLDLVPGAV----THAYPFRTITDAYKLEERL-RILEAANPEKIRVAIVGAGYSGVELACKLADRIG-EKGRFRLIELSDQILRTSPEFNREAAKKALDSKGVFIDLETKVAAIDHNSISL-------EYKNQVD-----------TIPVDVVIWTVGTKVSPVVTALP-LKQNQRGQITTTAQLQAI-EHPEIFALGDLADCLD----------AEGKQV-PATAQVAFQQADYTAWNIWATITNRPLLPFRYQ--PLGEMMALGIDNATLTGL-GV-QLDGSFAYLARRLAYLYRLPTLNHQLKVGFNW 386          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|654625087|ref|WP_028089351.1| (NADH dehydrogenase family protein [Dolichospermum circinale])

HSP 1 Score: 259.61 bits (662), Expect = 9.695e-78
Identity = 173/450 (38.44%), Postives = 249/450 (55.33%), Query Frame = 0
Query:   83 QVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSP-SPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            ++ + GGGFGGLY+ALRLS+L   S    P  +I LVD+ DRFVF PLLYEL   +    E+AP +  LL  TGI+F Q  V AID+  + VQ+ +Q E                   L YD+LVLALG E +L            L P +  +  PF T+ DA+ L  +L  ++A +   + R  +VGGGYSGVELA  LA R+G+ KGR  L+E G QIL  SP   R +A K L+ +GV + L   VV ++   + +  ++                      +P DLV+WT G +VSPVV ++  L+++ RG++ T   L+ L    +++ +GD A  +            E +QV P+TAQVAFQ+++  AWN+W+++T     P R+Q  PLGEM+ LG  +AT++GL G+  L+G  A LARRL Y+ R+PT + +LK    W
Sbjct:    7 KICILGGGFGGLYTALRLSQLPWEST---PKPEIILVDQSDRFVFSPLLYELLTRELQTWEIAPPYSELLEGTGIQFYQSTVSAIDINQQTVQLANQSE-------------------LNYDRLVLALGGETLL-----------DLVPGATDNAYPFRTITDAYRLEERLRILEAKNLEKI-RVAIVGGGYSGVELACKLADRIGQ-KGRFRLIEIGDQILRTSPEFNREAAKKALDSKGVFIDLETKVVAIEKNSISLEYKSQVD------------------TIPVDLVIWTIGTKVSPVVKSLP-LKQNQRGQITTTPQLQVL-EHPEIFALGDLADCLD----------AEGKQV-PATAQVAFQQADYTAWNIWATITNRPLLPFRYQ--PLGEMMALGVDNATLTGL-GV-QLDGSFAYLARRLAYLYRLPTLNHQLKVGFNW 386          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|518322581|ref|WP_019492788.1| (NADH dehydrogenase family protein [Calothrix sp. PCC 7103])

HSP 1 Score: 258.455 bits (659), Expect = 3.064e-77
Identity = 174/454 (38.33%), Postives = 241/454 (53.08%), Query Frame = 0
Query:   78 SKVKPQVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSEPMLPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            S+   ++ + GGGFGGLY+ALRLS+L   +   P   +I LVD+ DRF+F PLLYEL  G+    E+AP F  LL +TG+RF Q  V  ID+  K V +    E                   +  D+LVLALG E        L +  G++    S   PF T+ DA+ L  +L RI   S     R  +VG GYSGVELA  L+ RLG D+GR  LVE   QIL  SP   R +A K LE+ GV        +++D     +R  +   + K   +            +P DLV+WT G RV+PVV  +  L+++ RG+++ +  L+A     D++ +GD A     +G           Q +PSTAQ AFQ+++  AWN+W+SLT     P R+Q  PLGEM+TLG  +AT++GL   F L GP A++ARR  Y+ RMPT   +LK    W
Sbjct:    2 SEQSARICILGGGFGGLYTALRLSQLPWDNSQKP---EIILVDQSDRFLFSPLLYELLTGELQTWEIAPPFAELLQNTGVRFCQAAVSGIDVDSKSVHLHDGPE-------------------IKCDRLVLALGGE------TPLDMVPGAI----SYAYPFRTITDAYRLEERL-RILEESDKDKIRIAIVGAGYSGVELACKLSDRLG-DRGRFRLVEVADQILRTSPEFNREAAQKALEKHGV-------FLDLDTKVESIRQDSITLEYKNQVD-----------TIPVDLVIWTVGTRVAPVVRGLP-LKQNQRGQIIVESTLQA-PDYPDIFALGDLAECHDAQG-----------QKVPSTAQSAFQQADYTAWNIWASLTNRPLLPFRYQ--PLGEMMTLGVDNATLTGLG--FKLSGPLANIARRTAYLYRMPTLDHQLKVGFNW 386          
BLAST of EWM21650.1 vs. NCBI_GenBank
Match: gi|1039194034|gb|OBQ35535.1| (NADH dehydrogenase [Anabaena sp. CRKS33])

HSP 1 Score: 258.455 bits (659), Expect = 3.266e-77
Identity = 174/451 (38.58%), Postives = 249/451 (55.21%), Query Frame = 0
Query:   83 QVVVAGGGFGGLYSALRLSELSRPSRYAPPSIDITLVDRHDRFVFLPLLYELAMGDANEEEVAPRFESLLASTGIRFVQGEVEAIDLAGKCVQVQSQGEATEVSESAVEAPSSGSSKSLAYDKLVLALGSE-PM-LPPAASLPLSEGSLSPSPSSVMPFYTLRDAHALRRQLMRIDALSSPTLFRTVVVGGGYSGVELAANLATRLGRDKGRVTLVERGYQILGNSPMPVRASAGKRLEEEGVEVMLGVDVVEVDGARVVVRDRAAETQGKEGAEGAGGGGREGEVVLPADLVVWTAGARVSPVVGAMEGLEKDGRGKLVTDGGLRALGSGGDVYVVGDNAAVMGYRGGGPPGSVGEKEQVLPSTAQVAFQESEVAAWNLWSSLTPGAPGPLRFQYTPLGEMLTLGPADATISGLQGMFNLEGPSASLARRLVYIMRMPTGSQRLKAAKAW 531
            ++ + GGGFGGLY+ALRLS+L   S    P  +I LVD+ DRFVF PLLYEL   +    E+AP +  LL  TGI+F Q  V AID+  + VQ+ ++ E                   L YD+LVLALG E P+ L P A+            ++  PF T+ DA+ L  +L RI    +P   R  +VGGGYSGVELA  LA R+G +KGR  L+E   QIL  SP   R +A K L+ +GV + L   VV ++   + +  ++                      +P DLV+WT G +VSPVV ++  L+++ RG++ T   L+ L    +++ +GD A  +            E +QV P+TAQVAFQ+++  AWN+W+++T     P R+Q  PLGEM+ LG  +AT++GL G+  L+G  A LARRL Y+ R+PT + +LK    W
Sbjct:    7 KICILGGGFGGLYTALRLSQLPWEST---PKPEIILVDQSDRFVFSPLLYELLTRELQTWEIAPPYSELLQGTGIQFYQSTVSAIDIHQQTVQLANKSE-------------------LNYDRLVLALGGETPLDLVPGAT------------ANAYPFRTITDAYRLEERL-RILEAKNPEKIRVAIVGGGYSGVELACKLADRIG-EKGRFRLIEVADQILRTSPEFNREAAKKALDSKGVFIDLETKVVAIEKDSISLEYKSQVD------------------TIPVDLVIWTVGTKVSPVVKSLP-LKQNQRGQITTTPQLQVL-EHPEIFALGDLADCLD----------AEGKQV-PATAQVAFQQADYTAWNIWAAITNRPLLPFRYQ--PLGEMMALGIDNATLTGL-GV-QLDGSFAYLARRLAYLYRLPTLNHQLKVGFNW 386          
The following BLAST results are available for this feature:
BLAST of EWM21650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101905|gb|EWM21650.1|0.000e+0100.00fad-dependent pyridine nucleotide-disulfide oxidor... [more]
gi|553183170|ref|XP_005853852.1|0.000e+096.18NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
gi|516255932|ref|WP_017659895.1|6.002e-7938.68NADH dehydrogenase family protein [Geitlerinema sp... [more]
gi|494594480|ref|WP_007353046.1|8.811e-7939.17MULTISPECIES: NADH dehydrogenase family protein [K... [more]
gi|653155042|ref|WP_027404058.1|4.501e-7837.80NADH dehydrogenase family protein [Aphanizomenon f... [more]
gi|1027784848|ref|WP_063716209.1|6.002e-7838.46NADH dehydrogenase family protein [Leptolyngbya va... [more]
gi|1039165325|gb|OBQ10638.1|8.176e-7838.53NADH dehydrogenase [Anabaena sp. AL09][more]
gi|654625087|ref|WP_028089351.1|9.695e-7838.44NADH dehydrogenase family protein [Dolichospermum ... [more]
gi|518322581|ref|WP_019492788.1|3.064e-7738.33NADH dehydrogenase family protein [Calothrix sp. P... [more]
gi|1039194034|gb|OBQ35535.1|3.266e-7738.58NADH dehydrogenase [Anabaena sp. CRKS33][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9075rna9075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications