EWM21622.1, cds9037 (CDS) Nannochloropsis gaditana

Overview
NameEWM21622.1
Unique Namecds9037
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:259843..259932 -
Alignment locationKK037251.1:259394..259695 -
Alignment locationKK037251.1:259007..259233 -
Alignment locationKK037251.1:258814..258851 -

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Properties
Property NameValue
Protein idEWM21622.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g20.1954.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:259843..259932 -
KK037251.1supercontigKK037251.1:259394..259695 -
KK037251.1supercontigKK037251.1:259007..259233 -
KK037251.1supercontigKK037251.1:258814..258851 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21622.1 vs. NCBI_GenBank
Match: gi|585101877|gb|EWM21622.1| (hypothetical protein Naga_100012g20 [Nannochloropsis gaditana])

HSP 1 Score: 442.58 bits (1137), Expect = 3.513e-157
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 MLRESRQQVCDLILGANDTAAEDVVSELLTVLLRLSAEESIEDVSQIVCACLGELGAIDPARVSISLFDNRAARSAALTSSSYSTSVSTSSTPSSAPLLAPWHTNDSKMALELLEHMLVPKLRAATADKDRFPYAVQELLHLLYSRGMERLKTTGAEEEATHERGLDLEENGQRKAGASSGREGKKELALQPQQSDSRKGKGEEGQAKGPSFFERGWW 218
            MLRESRQQVCDLILGANDTAAEDVVSELLTVLLRLSAEESIEDVSQIVCACLGELGAIDPARVSISLFDNRAARSAALTSSSYSTSVSTSSTPSSAPLLAPWHTNDSKMALELLEHMLVPKLRAATADKDRFPYAVQELLHLLYSRGMERLKTTGAEEEATHERGLDLEENGQRKAGASSGREGKKELALQPQQSDSRKGKGEEGQAKGPSFFERGWW
Sbjct:    1 MLRESRQQVCDLILGANDTAAEDVVSELLTVLLRLSAEESIEDVSQIVCACLGELGAIDPARVSISLFDNRAARSAALTSSSYSTSVSTSSTPSSAPLLAPWHTNDSKMALELLEHMLVPKLRAATADKDRFPYAVQELLHLLYSRGMERLKTTGAEEEATHERGLDLEENGQRKAGASSGREGKKELALQPQQSDSRKGKGEEGQAKGPSFFERGWW 218
[Close]
BLAST of EWM21622.1 vs. NCBI_GenBank
Match: gi|298709382|emb|CBJ31315.1| (similar to ataxia telangiectasia and Rad3 related protein [Ectocarpus siliculosus])

HSP 1 Score: 73.9442 bits (180), Expect = 1.137e-11
Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 0 
Query:    1 MLRESRQQVCDLIL--GANDTAAEDVVSELLTVLLRLSAEES--IEDVSQIVCACLGELGAIDPARVSISLFDNRAARSAALTSSSYSTSVSTSSTPSSAPLLAPWHTNDSKMALELLEHMLVPKLRAATA--DKDRFPYAVQELLHLLYSRG 147
            ++R  +Q + +L+L  G+  +  + VVS LL  LL +S +    I D+  I   CLGE+GAIDPARV + L D  A       SS    ++            APW     +M+L L+  +LVP  RA+T   ++DR  + +QELL +L   G
Sbjct:  388 VVRRDKQHLAELVLEGGSGSSEVDPVVSRLLAGLLEMSTDSDARIRDLCGI---CLGEVGAIDPARVRLGLRDGAAVEGGGEGSSISGQALLEG---------APWEMTLEEMSLLLIRDLLVPAFRASTTSMEQDRVAFGIQELLRILSGNG 528
The following BLAST results are available for this feature:
BLAST of EWM21622.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101877|gb|EWM21622.1|3.513e-157100.00hypothetical protein Naga_100012g20 [Nannochlorops... [more]
gi|298709382|emb|CBJ31315.1|1.137e-1134.64similar to ataxia telangiectasia and Rad3 related ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9067rna9067Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications