EWM21581.1, cds9033 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|585101836|gb|EWM21581.1| (hypothetical protein Naga_100012g16 [Nannochloropsis gaditana]) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query: 1 MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG
Sbjct: 1 MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|551673313|ref|XP_005839412.1| (hypothetical protein GUITHDRAFT_65153 [Guillardia theta CCMP2712] >gi|428183575|gb|EKX52432.1| hypothetical protein GUITHDRAFT_65153 [Guillardia theta CCMP2712]) HSP 1 Score: 199.519 bits (506), Expect = 4.258e-60 Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 0
Query: 58 LIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
+IGFGSLLSE S+R++FP L NFRL R+ GY+R+ RHPA+IFF+R IAR +T+E +SLSVE +G F+ + FD+ LQ + +REEEF +A EL +G K +GL+C A TD + G+ + +YG +GL++IW+ W E ILPC VYLRHCVL+ K G++ FL TFL DRKTTI+E+L P I++ PP S+ RYSG
Sbjct: 19 IIGFGSLLSEASARSSFPNLQNFRLARLRGYKRVMRHPASIFFQRNIARKDTREFASLSVEPCPDG-----NFLVAAFDIPSEELQAYHEREEEFFIALAPIEEL-DGSKVQEGLLCCAGTDDEYIAKHGRKNFEERYGSYGLSTIWN-WQGE--ILPCRVYLRHCVLACSKAGEE--VKEDFLVNTFLWDRKTTIKEYLQANPSIMEEEPPESLRHRYSG 228
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|698804864|ref|XP_009835461.1| (hypothetical protein H257_10566 [Aphanomyces astaci] >gi|574109453|gb|ETV74956.1| hypothetical protein H257_10566 [Aphanomyces astaci]) HSP 1 Score: 198.364 bits (503), Expect = 9.732e-60 Identity = 109/225 (48.44%), Postives = 144/225 (64.00%), Query Frame = 0
Query: 55 SVTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
+ T+IG+GSLLSETS+R+TF V NFRLGRV+ YRR+F HPA+IFF+RGIA ET E++SLS E V G + F S FD+ L DF DRE+EF+ EF E G + KGLMC DA + G+ + Y +GL++IW + SGILPC VYLRHC+L+ +K G+D + F++ T+L DR TTI+ +LA P I+ PP + GRYSG
Sbjct: 3 TTTIIGYGSLLSETSARSTFGHHVKNFRLGRVHNYRRVFAHPASIFFQRGIAIKETLEMASLSAE-VSPGTS----FAVSAFDIPTSQLPDFYDREDEFSIEEVEFHEAKYG-RVSKGLMCCRWNDADYIAKRGQSTFDKLYRTYGLDTIWG-YDASSGILPCRVYLRHCILAVQKLGED--IYDDFVQNTYLGDRTTTIQSYLAENPTIMDAVPPAHLVGRYSG 218
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|673043115|ref|XP_008875518.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574468750|gb|ETV95767.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 198.364 bits (503), Expect = 1.026e-59 Identity = 107/224 (47.77%), Postives = 142/224 (63.39%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
T+IG+GSLLSETS+R+TF V NFR GRV+ YRR+F HPA+IFF+RGIA +T+E +SLS E + F S F++ L DF DREEEF+ F + +G GLMC +DA G+ R+Y +GL++IW + SGILPC VYLRHC+L+ +K G+D + F++ TFL DRKTTI+ +LA P I+ T PPP + GRYSG
Sbjct: 5 ATIIGYGSLLSETSARSTFGHHVKNFRFGRVHNYRRVFAHPASIFFQRGIANYDTQEFASLSAE-----PSIGSSFTVSAFEIPTSQLPDFYDREEEFSIESISFHDT-KGGAVSTGLMCCRWSDAAYIATRGQDTFDRRYKAYGLDTIWG-YNASSGILPCRVYLRHCILAVQKLGED--VYDDFVQNTFLGDRKTTIQTYLAENPTIMTTVPPPHLVGRYSG 219
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|1173940608|gb|OQR89978.1| (hypothetical protein ACHHYP_20239 [Achlya hypogyna]) HSP 1 Score: 197.208 bits (500), Expect = 1.978e-59 Identity = 107/224 (47.77%), Postives = 145/224 (64.73%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
V +IG+GSLLSE S+R+TF V +FRL R+ +RR+F HPA+IFF+RGIARPET+EISSLS E EG + F S+F++ L F REEEF F E+ + +GLMC TDA + G+ + Y V+GL +IW +G +SGILPC VY+RHC+L+ +K G+D + F+ TFL+DRKTTI+ +LA P I+ PPP ++ RYSG
Sbjct: 2 VNIIGYGSLLSELSARSTFGHHVSHFRLARIKNFRRVFAHPASIFFQRGIARPETQEISSLSAEPC-EGCS----FTISVFEIPEDQLPGFYAREEEFKIETVAFEEV--NGRVNQGLMCCRWTDAEYIEARGQDAFDKLYKVYGLETIWG-YGSDSGILPCRVYMRHCILAVQKLGED--VYDDFVNNTFLSDRKTTIKTYLAENPSIMHELPPPHLASRYSG 215
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|570313136|gb|ETO61084.1| (hypothetical protein F444_20836 [Phytophthora parasitica P1976]) HSP 1 Score: 194.897 bits (494), Expect = 1.972e-58 Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
V ++GFGSLLSE S+R+TF V NFRL V YRR+F HPA+IFF+RGIA ETKEI+SLS A G + F+ S+FD+ L DF +REEEF A+F EL +G G+ LMC +D + G+ KY V+GLN+IW W +SGILPC VYLRHC+L+ +K GQD + F+ T+L DR T+I+E++ P I+ PPP + RYSG
Sbjct: 2 VAIVGFGSLLSEASARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLEGPPPHLVDRYSG 216
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|675178459|ref|XP_008898114.1| (hypothetical protein PPTG_06093 [Phytophthora parasitica INRA-310] >gi|566009441|gb|ETI32352.1| hypothetical protein F443_20818 [Phytophthora parasitica P1569] >gi|568034979|gb|ETM32640.1| hypothetical protein L914_19994 [Phytophthora parasitica] >gi|568102361|gb|ETN17043.1| hypothetical protein PPTG_06093 [Phytophthora parasitica INRA-310] >gi|570967256|gb|ETP30375.1| hypothetical protein F442_20614 [Phytophthora parasitica P10297]) HSP 1 Score: 194.897 bits (494), Expect = 2.128e-58 Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
V ++GFGSLLSE S+R+TF V NFRL V YRR+F HPA+IFF+RGIA ETKEI+SLS A G + F+ S+FD+ L DF +REEEF A+F EL +G G+ LMC +D + G+ KY V+GLN+IW W +SGILPC VYLRHC+L+ +K GQD + F+ T+L DR T+I+E++ P I+ PPP + RYSG
Sbjct: 2 VAIVGFGSLLSEASARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLERPPPHLVDRYSG 216
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|567946926|gb|ETK72726.1| (hypothetical protein L915_20231 [Phytophthora parasitica] >gi|567975636|gb|ETL26179.1| hypothetical protein L916_20099 [Phytophthora parasitica] >gi|568005087|gb|ETL79393.1| hypothetical protein L917_19967 [Phytophthora parasitica] >gi|570936956|gb|ETP02213.1| hypothetical protein F441_20680 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 194.512 bits (493), Expect = 2.672e-58 Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
V ++GFGSLLSE S+R+TF V NFRL V YRR+F HPA+IFF+RGIA ETKEI+SLS A G + F+ S+FD+ L DF +REEEF A+F EL +G G+ LMC +D + G+ KY V+GLN+IW W +SGILPC VYLRHC+L+ +K GQD + F+ T+L DR T+I+E++ P I+ PPP + RYSG
Sbjct: 2 VAIVGFGSLLSEVSARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLERPPPHLVDRYSG 216
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|695469189|ref|XP_009540060.1| (hypothetical protein PHYSODRAFT_343221 [Phytophthora sojae] >gi|348664663|gb|EGZ04507.1| hypothetical protein PHYSODRAFT_343221 [Phytophthora sojae]) HSP 1 Score: 191.815 bits (486), Expect = 2.814e-57 Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 0
Query: 56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
V ++GFGSLLSE S+R+TF V NFRL RV YRR+F HPA+IFF+RGIA +TKE++SLS E A G E F+ S+FD+ L DF +REEEF A+F EL +G + LMC +D + G+ KY +GL++IW W +SGILPC VYLRHC+L+ +K GQD + F+ T+L DR TTI+E++ P I+ PPP + RYSG
Sbjct: 2 VAIVGFGSLLSEASARSTFGDGVRNFRLARVLDYRRVFAHPASIFFQRGIADLQTKEMASLST----EPAPGCE-FLVSVFDIPEQLLPDFYEREEEFEIISAKFQEL-DGTSGEEALMCTRWSDEEYIAKRGQETFDTKYKAYGLDTIWG-WDAQSGILPCRVYLRHCLLAVKKLGQD--VYDDFVTTTYLGDRSTTIKEYIEANPSIMLELPPPHLVDRYSG 216
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|676393403|ref|XP_009039979.1| (hypothetical protein AURANDRAFT_30996 [Aureococcus anophagefferens] >gi|323449443|gb|EGB05331.1| hypothetical protein AURANDRAFT_30996 [Aureococcus anophagefferens]) HSP 1 Score: 191.045 bits (484), Expect = 7.947e-57 Identity = 110/224 (49.11%), Postives = 137/224 (61.16%), Query Frame = 0
Query: 57 TLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLF--DVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
T++GFGSLLSE S+R TFP L FRL RV GYRR+F H A+IFFERGIA TKE SSLS E + + FV F DV F REEEFA A F L +G G+G++C +DA +RWG+ +RKY H + SIWD W +SG+ PC YLRHCVL+ K G A SFL +T+L DR+TT+ +L P ++ T PP S+ GRYSG
Sbjct: 12 TILGFGSLLSEQSARLTFPDLDEFRLVRVRGYRRVFGHAASIFFERGIADAATKEFSSLSAEPCADAS-----FVACAFEVDVDADAWARFEAREEEFALADAPFAAL-DGGAGGEGVLCTRGSDAAFVERWGRETYERKYLAH-VPSIWD-WSRDSGLRPCACYLRHCVLAVTKAGP--AALDSFLDDTYLVDRETTLRTYLDANPHVMDTRPPESLIGRYSG 225 The following BLAST results are available for this feature:
BLAST of EWM21581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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