EWM21581.1, cds9033 (CDS) Nannochloropsis gaditana

Overview
NameEWM21581.1
Unique Namecds9033
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:248584..249420 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21581.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g16.1913.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:248584..249420 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|585101836|gb|EWM21581.1| (hypothetical protein Naga_100012g16 [Nannochloropsis gaditana])

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query:    1 MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG
Sbjct:    1 MIHALIIILTILKGNSSMVRIVNAVTGATAYTPPPFTHAGVPMTTEDLHALNGKSVTLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|551673313|ref|XP_005839412.1| (hypothetical protein GUITHDRAFT_65153 [Guillardia theta CCMP2712] >gi|428183575|gb|EKX52432.1| hypothetical protein GUITHDRAFT_65153 [Guillardia theta CCMP2712])

HSP 1 Score: 199.519 bits (506), Expect = 4.258e-60
Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 0
Query:   58 LIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            +IGFGSLLSE S+R++FP L NFRL R+ GY+R+ RHPA+IFF+R IAR +T+E +SLSVE   +G      F+ + FD+    LQ + +REEEF   +A   EL +G K  +GL+C A TD     + G+   + +YG +GL++IW+ W  E  ILPC VYLRHCVL+  K G++      FL  TFL DRKTTI+E+L   P I++  PP S+  RYSG
Sbjct:   19 IIGFGSLLSEASARSSFPNLQNFRLARLRGYKRVMRHPASIFFQRNIARKDTREFASLSVEPCPDG-----NFLVAAFDIPSEELQAYHEREEEFFIALAPIEEL-DGSKVQEGLLCCAGTDDEYIAKHGRKNFEERYGSYGLSTIWN-WQGE--ILPCRVYLRHCVLACSKAGEE--VKEDFLVNTFLWDRKTTIKEYLQANPSIMEEEPPESLRHRYSG 228          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|698804864|ref|XP_009835461.1| (hypothetical protein H257_10566 [Aphanomyces astaci] >gi|574109453|gb|ETV74956.1| hypothetical protein H257_10566 [Aphanomyces astaci])

HSP 1 Score: 198.364 bits (503), Expect = 9.732e-60
Identity = 109/225 (48.44%), Postives = 144/225 (64.00%), Query Frame = 0
Query:   55 SVTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            + T+IG+GSLLSETS+R+TF   V NFRLGRV+ YRR+F HPA+IFF+RGIA  ET E++SLS E V  G +    F  S FD+    L DF DRE+EF+    EF E   G +  KGLMC    DA    + G+    + Y  +GL++IW  +   SGILPC VYLRHC+L+ +K G+D   +  F++ T+L DR TTI+ +LA  P I+   PP  + GRYSG
Sbjct:    3 TTTIIGYGSLLSETSARSTFGHHVKNFRLGRVHNYRRVFAHPASIFFQRGIAIKETLEMASLSAE-VSPGTS----FAVSAFDIPTSQLPDFYDREDEFSIEEVEFHEAKYG-RVSKGLMCCRWNDADYIAKRGQSTFDKLYRTYGLDTIWG-YDASSGILPCRVYLRHCILAVQKLGED--IYDDFVQNTYLGDRTTTIQSYLAENPTIMDAVPPAHLVGRYSG 218          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|673043115|ref|XP_008875518.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574468750|gb|ETV95767.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 198.364 bits (503), Expect = 1.026e-59
Identity = 107/224 (47.77%), Postives = 142/224 (63.39%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
             T+IG+GSLLSETS+R+TF   V NFR GRV+ YRR+F HPA+IFF+RGIA  +T+E +SLS E      +    F  S F++    L DF DREEEF+     F +  +G     GLMC   +DA      G+    R+Y  +GL++IW  +   SGILPC VYLRHC+L+ +K G+D   +  F++ TFL DRKTTI+ +LA  P I+ T PPP + GRYSG
Sbjct:    5 ATIIGYGSLLSETSARSTFGHHVKNFRFGRVHNYRRVFAHPASIFFQRGIANYDTQEFASLSAE-----PSIGSSFTVSAFEIPTSQLPDFYDREEEFSIESISFHDT-KGGAVSTGLMCCRWSDAAYIATRGQDTFDRRYKAYGLDTIWG-YNASSGILPCRVYLRHCILAVQKLGED--VYDDFVQNTFLGDRKTTIQTYLAENPTIMTTVPPPHLVGRYSG 219          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|1173940608|gb|OQR89978.1| (hypothetical protein ACHHYP_20239 [Achlya hypogyna])

HSP 1 Score: 197.208 bits (500), Expect = 1.978e-59
Identity = 107/224 (47.77%), Postives = 145/224 (64.73%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            V +IG+GSLLSE S+R+TF   V +FRL R+  +RR+F HPA+IFF+RGIARPET+EISSLS E   EG +    F  S+F++    L  F  REEEF      F E+    +  +GLMC   TDA   +  G+    + Y V+GL +IW  +G +SGILPC VY+RHC+L+ +K G+D   +  F+  TFL+DRKTTI+ +LA  P I+   PPP ++ RYSG
Sbjct:    2 VNIIGYGSLLSELSARSTFGHHVSHFRLARIKNFRRVFAHPASIFFQRGIARPETQEISSLSAEPC-EGCS----FTISVFEIPEDQLPGFYAREEEFKIETVAFEEV--NGRVNQGLMCCRWTDAEYIEARGQDAFDKLYKVYGLETIWG-YGSDSGILPCRVYMRHCILAVQKLGED--VYDDFVNNTFLSDRKTTIKTYLAENPSIMHELPPPHLASRYSG 215          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|570313136|gb|ETO61084.1| (hypothetical protein F444_20836 [Phytophthora parasitica P1976])

HSP 1 Score: 194.897 bits (494), Expect = 1.972e-58
Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            V ++GFGSLLSE S+R+TF   V NFRL  V  YRR+F HPA+IFF+RGIA  ETKEI+SLS       A G + F+ S+FD+    L DF +REEEF    A+F EL +G   G+ LMC   +D     + G+     KY V+GLN+IW  W  +SGILPC VYLRHC+L+ +K GQD   +  F+  T+L DR T+I+E++   P I+   PPP +  RYSG
Sbjct:    2 VAIVGFGSLLSEASARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLEGPPPHLVDRYSG 216          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|675178459|ref|XP_008898114.1| (hypothetical protein PPTG_06093 [Phytophthora parasitica INRA-310] >gi|566009441|gb|ETI32352.1| hypothetical protein F443_20818 [Phytophthora parasitica P1569] >gi|568034979|gb|ETM32640.1| hypothetical protein L914_19994 [Phytophthora parasitica] >gi|568102361|gb|ETN17043.1| hypothetical protein PPTG_06093 [Phytophthora parasitica INRA-310] >gi|570967256|gb|ETP30375.1| hypothetical protein F442_20614 [Phytophthora parasitica P10297])

HSP 1 Score: 194.897 bits (494), Expect = 2.128e-58
Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            V ++GFGSLLSE S+R+TF   V NFRL  V  YRR+F HPA+IFF+RGIA  ETKEI+SLS       A G + F+ S+FD+    L DF +REEEF    A+F EL +G   G+ LMC   +D     + G+     KY V+GLN+IW  W  +SGILPC VYLRHC+L+ +K GQD   +  F+  T+L DR T+I+E++   P I+   PPP +  RYSG
Sbjct:    2 VAIVGFGSLLSEASARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLERPPPHLVDRYSG 216          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|567946926|gb|ETK72726.1| (hypothetical protein L915_20231 [Phytophthora parasitica] >gi|567975636|gb|ETL26179.1| hypothetical protein L916_20099 [Phytophthora parasitica] >gi|568005087|gb|ETL79393.1| hypothetical protein L917_19967 [Phytophthora parasitica] >gi|570936956|gb|ETP02213.1| hypothetical protein F441_20680 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 194.512 bits (493), Expect = 2.672e-58
Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            V ++GFGSLLSE S+R+TF   V NFRL  V  YRR+F HPA+IFF+RGIA  ETKEI+SLS       A G + F+ S+FD+    L DF +REEEF    A+F EL +G   G+ LMC   +D     + G+     KY V+GLN+IW  W  +SGILPC VYLRHC+L+ +K GQD   +  F+  T+L DR T+I+E++   P I+   PPP +  RYSG
Sbjct:    2 VAIVGFGSLLSEVSARSTFGDGVHNFRLATVLDYRRVFAHPASIFFQRGIANLETKEIASLST----APAPGCK-FLVSVFDIPEELLPDFYEREEEFKIISAKFQEL-DGSAGGEALMCTRWSDEEYIAKRGQDTFDCKYKVYGLNTIWG-WNADSGILPCRVYLRHCLLAVKKLGQD--VYDDFVATTYLGDRATSIKEYIEANPSIMLERPPPHLVDRYSG 216          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|695469189|ref|XP_009540060.1| (hypothetical protein PHYSODRAFT_343221 [Phytophthora sojae] >gi|348664663|gb|EGZ04507.1| hypothetical protein PHYSODRAFT_343221 [Phytophthora sojae])

HSP 1 Score: 191.815 bits (486), Expect = 2.814e-57
Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 0
Query:   56 VTLIGFGSLLSETSSRTTFPQLV-NFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLFDVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            V ++GFGSLLSE S+R+TF   V NFRL RV  YRR+F HPA+IFF+RGIA  +TKE++SLS     E A G E F+ S+FD+    L DF +REEEF    A+F EL +G    + LMC   +D     + G+     KY  +GL++IW  W  +SGILPC VYLRHC+L+ +K GQD   +  F+  T+L DR TTI+E++   P I+   PPP +  RYSG
Sbjct:    2 VAIVGFGSLLSEASARSTFGDGVRNFRLARVLDYRRVFAHPASIFFQRGIADLQTKEMASLST----EPAPGCE-FLVSVFDIPEQLLPDFYEREEEFEIISAKFQEL-DGTSGEEALMCTRWSDEEYIAKRGQETFDTKYKAYGLDTIWG-WDAQSGILPCRVYLRHCLLAVKKLGQD--VYDDFVTTTYLGDRSTTIKEYIEANPSIMLELPPPHLVDRYSG 216          
BLAST of EWM21581.1 vs. NCBI_GenBank
Match: gi|676393403|ref|XP_009039979.1| (hypothetical protein AURANDRAFT_30996 [Aureococcus anophagefferens] >gi|323449443|gb|EGB05331.1| hypothetical protein AURANDRAFT_30996 [Aureococcus anophagefferens])

HSP 1 Score: 191.045 bits (484), Expect = 7.947e-57
Identity = 110/224 (49.11%), Postives = 137/224 (61.16%), Query Frame = 0
Query:   57 TLIGFGSLLSETSSRTTFPQLVNFRLGRVNGYRRLFRHPAAIFFERGIARPETKEISSLSVEYVGEGATGEEGFVCSLF--DVMHFNLQDFLDREEEFAFTMAEFTELGEGDKRGKGLMCLATTDAHVEDRWGKGYIKRKYGVHGLNSIWDEWGPESGILPCPVYLRHCVLSARKQGQDGPAFRSFLRETFLADRKTTIEEHLARRPDILQTNPPPSVSGRYSG 278
            T++GFGSLLSE S+R TFP L  FRL RV GYRR+F H A+IFFERGIA   TKE SSLS E   + +     FV   F  DV       F  REEEFA   A F  L +G   G+G++C   +DA   +RWG+   +RKY  H + SIWD W  +SG+ PC  YLRHCVL+  K G    A  SFL +T+L DR+TT+  +L   P ++ T PP S+ GRYSG
Sbjct:   12 TILGFGSLLSEQSARLTFPDLDEFRLVRVRGYRRVFGHAASIFFERGIADAATKEFSSLSAEPCADAS-----FVACAFEVDVDADAWARFEAREEEFALADAPFAAL-DGGAGGEGVLCTRGSDAAFVERWGRETYERKYLAH-VPSIWD-WSRDSGLRPCACYLRHCVLAVTKAGP--AALDSFLDDTYLVDRETTLRTYLDANPHVMDTRPPESLIGRYSG 225          
The following BLAST results are available for this feature:
BLAST of EWM21581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101836|gb|EWM21581.1|0.000e+0100.00hypothetical protein Naga_100012g16 [Nannochlorops... [more]
gi|551673313|ref|XP_005839412.1|4.258e-6048.42hypothetical protein GUITHDRAFT_65153 [Guillardia ... [more]
gi|698804864|ref|XP_009835461.1|9.732e-6048.44hypothetical protein H257_10566 [Aphanomyces astac... [more]
gi|673043115|ref|XP_008875518.1|1.026e-5947.77hypothetical protein, variant 1 [Aphanomyces invad... [more]
gi|1173940608|gb|OQR89978.1|1.978e-5947.77hypothetical protein ACHHYP_20239 [Achlya hypogyna... [more]
gi|570313136|gb|ETO61084.1|1.972e-5848.66hypothetical protein F444_20836 [Phytophthora para... [more]
gi|675178459|ref|XP_008898114.1|2.128e-5848.66hypothetical protein PPTG_06093 [Phytophthora para... [more]
gi|567946926|gb|ETK72726.1|2.672e-5848.66hypothetical protein L915_20231 [Phytophthora para... [more]
gi|695469189|ref|XP_009540060.1|2.814e-5748.21hypothetical protein PHYSODRAFT_343221 [Phytophtho... [more]
gi|676393403|ref|XP_009039979.1|7.947e-5749.11hypothetical protein AURANDRAFT_30996 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9063rna9063Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications