EWM29759.1, cds902 (CDS) Nannochloropsis gaditana

Overview
NameEWM29759.1
Unique Namecds902
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:683224..684279 +
Alignment locationCM002456.1:684401..686608 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29759.1
Productppgpp synthetase
Orig transcript idgnl|cribi|Naga_100022g11.858.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:683224..684279 +
CM002456.1supercontigCM002456.1:684401..686608 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR003607HD/PDEase_dom
Homology
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|585112339|gb|EWM29759.1| (ppgpp synthetase [Nannochloropsis gaditana])

HSP 1 Score: 2197.16 bits (5692), Expect = 0.000e+0
Identity = 1087/1087 (100.00%), Postives = 1087/1087 (100.00%), Query Frame = 0
Query:    1 MGQRDARWRKKSRSLLRTLKYLTLVAVAHLNVKAFQLRSVLPSSTVCSQHFGPAPTAMWHERLLHAHVHVRQPSSSLSKDRPQTAMYASSFDLESLLRLPKDPAPSPRPSTSSASSAQDTVIAAVASAAECERVIDRLERGLSKLKMIHGWCISPADAAFLDKTREELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKRLVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVVDFVYRAKGDREDSRAAWSSASERKDKEALWIWQAPLFVWPWCLIGNADSSSSSRSSSSSSKSGADLLSNKVWGVSTRSRQKGFGQVKLKDTESVWDSGEIIWLRECELRHGRLSLGALAYGMAHTLVAALGASGMEWGMGDVGLDLTAAAASTISLEGSGAERICMDVASAACTGAATNWLRFAPWVATAFPPLSSLECFQMVSLVGAGEVLGGIVPETVAFNMRYQDMRRRRRAGENFLDLSSEEASLEAAARGHSDDSAMSGSGDRDGRGEGLQVQQSGLVGGNSALLTRTIPLGWLKEQERLLGRLGMVTTAGLALFGALG 1087
            MGQRDARWRKKSRSLLRTLKYLTLVAVAHLNVKAFQLRSVLPSSTVCSQHFGPAPTAMWHERLLHAHVHVRQPSSSLSKDRPQTAMYASSFDLESLLRLPKDPAPSPRPSTSSASSAQDTVIAAVASAAECERVIDRLERGLSKLKMIHGWCISPADAAFLDKTREELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKRLVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVVDFVYRAKGDREDSRAAWSSASERKDKEALWIWQAPLFVWPWCLIGNADSSSSSRSSSSSSKSGADLLSNKVWGVSTRSRQKGFGQVKLKDTESVWDSGEIIWLRECELRHGRLSLGALAYGMAHTLVAALGASGMEWGMGDVGLDLTAAAASTISLEGSGAERICMDVASAACTGAATNWLRFAPWVATAFPPLSSLECFQMVSLVGAGEVLGGIVPETVAFNMRYQDMRRRRRAGENFLDLSSEEASLEAAARGHSDDSAMSGSGDRDGRGEGLQVQQSGLVGGNSALLTRTIPLGWLKEQERLLGRLGMVTTAGLALFGALG
Sbjct:    1 MGQRDARWRKKSRSLLRTLKYLTLVAVAHLNVKAFQLRSVLPSSTVCSQHFGPAPTAMWHERLLHAHVHVRQPSSSLSKDRPQTAMYASSFDLESLLRLPKDPAPSPRPSTSSASSAQDTVIAAVASAAECERVIDRLERGLSKLKMIHGWCISPADAAFLDKTREELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKRLVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVVDFVYRAKGDREDSRAAWSSASERKDKEALWIWQAPLFVWPWCLIGNADSSSSSRSSSSSSKSGADLLSNKVWGVSTRSRQKGFGQVKLKDTESVWDSGEIIWLRECELRHGRLSLGALAYGMAHTLVAALGASGMEWGMGDVGLDLTAAAASTISLEGSGAERICMDVASAACTGAATNWLRFAPWVATAFPPLSSLECFQMVSLVGAGEVLGGIVPETVAFNMRYQDMRRRRRAGENFLDLSSEEASLEAAARGHSDDSAMSGSGDRDGRGEGLQVQQSGLVGGNSALLTRTIPLGWLKEQERLLGRLGMVTTAGLALFGALG 1087          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|299470307|emb|CBN78357.1| (Guanosine polyphosphate pyrophosphohydrolases/synthetases [Ectocarpus siliculosus])

HSP 1 Score: 291.582 bits (745), Expect = 3.352e-80
Identity = 231/634 (36.44%), Postives = 314/634 (49.53%), Query Frame = 0
Query:  135 IDRLERGLSKLKMIHGWCISPADAAFLDKTREELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRF---GSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLES--KQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKRLVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVV 763
            +  L RGL +L    GWC++ A+A  LD     +    +YL   D+Q  I  A+QVAYHAH GQ R+SGEPF+ HP+EV  IL  LRMDA+++ A LLHDTVEDT ++  DI+  FG+ VRR+VEGETK+SK+P R+S   AS+       GG      AE A      Q  NL H+L+AM++D+RVLVVKL+DRLHNMRTLG M   KQ +IA+ET+ V+VPLAR++G+W +KTELED+ FKTLH  EHA +T  L  R    ++ HT  F     RRL           R+L     L+G   + R+    K  Y ++       G +    D +  KV  S     GP    +G   +S   S             + +RA C  +LE +   L  P S  RV D+I+ P  N Y+ALH  + + G   P+EV + TD M++VA +G+ A     +S    +L   ++A+                  LQ+SA +      +   GD+ +A                  VRD  S+T  Q           +R V    G +L L         T+RDAA             R    S T       VA   VNG+ V L+RPL  GDVV
Sbjct:  153 LSHLNRGLLQLSATFGWCVTDAEAVELDGFNRRVLEDASYL-SPDEQNWIGVAVQVAYHAHQGQRRKSGEPFIMHPVEVMGILAGLRMDAETLVAALLHDTVEDTRLAFEDIETQFGSTVRRIVEGETKLSKIPGRVSAFTASDY----EMGGSTAQQRAEGA-----KQADNLRHMLIAMSKDWRVLVVKLSDRLHNMRTLGAMPQHKQVRIAQETMGVFVPLARRMGLWDIKTELEDMCFKTLHPEEHARVTELLRLRSA--STGHTKDFLESEQRRLE----------RVLGHTAVLEGRARSFRVTMGVKPAYTVWRSMARNGGRLGNVLDCVHFKVSFSLHPKPGP----DGVVRSSFENS-------------ERERAACYGLLESLHG-LLPPVSPPRVEDFIAVPKPNNYRALHTAVLLRG--HPVEVQILTDDMDRVAHFGMAASQVARSSGNPKNL--PWLAE------------------LQTSAEAC-----ALGCGDTYSA-----------------NVRD--SLTRAQ----------ERRFVFDPQGKILDL-----AGNATMRDAA-------------RELHDSKT-----CRVAATYVNGRLVPLNRPLRNGDVV 667          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|676392011|ref|XP_009039283.1| (hypothetical protein AURANDRAFT_10270, partial [Aureococcus anophagefferens] >gi|323450143|gb|EGB06026.1| hypothetical protein AURANDRAFT_10270, partial [Aureococcus anophagefferens])

HSP 1 Score: 271.937 bits (694), Expect = 6.816e-77
Identity = 202/587 (34.41%), Postives = 282/587 (48.04%), Query Frame = 0
Query:  184 IETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVV--VSSEHVAGP-SSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALW---DGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKR-LVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVV 763
            +  AL+VA+ AH GQ+RRSGEPF+ HP+ VA +L  L MD +++AAGLLHDTVEDT V++ +I+A FGA VR +VEGETKVSKLPK   R                             +QL NL  + ++M  D+R+++VKLADRLHNMRTL  M   KQ +IARETL+++ PLA +LG+W  K ELED AF+  H   +AA+  AL+ RR            SR  S      +AL   L +   L+G  V+V   +K+ Y L+ +    +  +D  PD++ L+VV  V  +  A P  +W E + +                        LC  VL  +Q +L+   +  RV+DYISFP  NGYQ+LH  LR       +EV + T WM +VA++G+ A W   DG  S  +   D                                    G  + G    A P  + WL S+      +       ++++ + T+++++  KR  V   DG +L L       G TV DAA                      +   L+VA A VNGQ V LS  L  GDVV
Sbjct:    6 VHDALRVAHGAHAGQMRRSGEPFIVHPVAVAGLLCGLGMDRETVAAGLLHDTVEDTAVTLEEIEATFGADVRAIVEGETKVSKLPKLAKR-----------------------------EQLENLRQMFISMTDDYRIIIVKLADRLHNMRTLEHMPRHKQLRIARETLEIFAPLAHRLGLWTFKAELEDWAFRYAHPGPYAALEAALEVRR------------SRYESALKGSRKALEARLAADPKLRGVKVSVSGRTKELYSLWLKMERAD--LDGVPDVVALRVVLEVPRDGAAEPLEAWRERSTW------------------------LCYHVLGLVQ-QLKGCEAVPRVKDYISFPKPNGYQSLHASLRREAEDQVVEVQIRTAWMHEVAEHGMAAHWLYKDGLFSVEDLDDD------------------------------------GEPADGRRGVAKPYAVSWLNSVKDWQHEI------HSSREFVETIRKEVLGKRVFVFLRDGQILDL-----SRGATVLDAAFH------------------IHTEIGLKVATAYVNGQEVQLSYELKNGDVV 459          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|223998738|ref|XP_002289042.1| (GTP pyrophosphokinase-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976150|gb|EED94478.1| GTP pyrophosphokinase-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 269.626 bits (688), Expect = 5.308e-76
Identity = 202/630 (32.06%), Postives = 305/630 (48.41%), Query Frame = 0
Query:  166 EELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRL--ESKQPYQLFAR-DTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRA--LCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEP-VAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKRLVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVVDFVYR--AKGDREDSRAAWSSASERK 787
            + L P V+YL G  + AK++ AL+VAY AH  Q+R+SGEPF+ HP+EVA +L+ ++MDA+++ AGLLHDTVEDT ++   ++A+FG  V+ +VEGETKVSKLPK +                 G +D A       D+Q  NL  + +AM  D+R+++VKLADRLHNMRTL  M P KQ+KI+RETLD++ PLA ++G+W+ K+ELED AFK L+  E+  + + L  RR+ + +   N              + L   LK+   L+  DV + +   +K+ Y L+ + +   +  ++   DL+ L+V++                          +P   + +D  AD    LC  VL  +Q         ++V+DYISFP  NGYQ+LH  L   G    +EV + T +M QVA+YG+ + W   A   E   ++  +   P ++ +KE           Q  AVS+                                  RD      ++L+G        +  V   +G +L+L                    GATA  A     + L      L++ G  +NG+PV +S  L  GDVV  + R  AK   E  R A S ++  K
Sbjct:    7 DSLLPTVSYL-GTSNAAKVKQALRVAYRAHRSQMRKSGEPFIIHPVEVALLLSGMKMDAETVMAGLLHDTVEDTDLTFEQVEAMFGVEVKNIVEGETKVSKLPKIM-----------------GFSDFA-------DEQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPEKQKKISRETLDIFAPLAHRMGIWQFKSELEDTAFKYLYPEEYKLLNQRLLQRRDKIINTLDNSI------------QVLEHTLKNDPTLRSQDVEIEVVGRTKELYSLWHKMEMKHDRNLNHITDLVALRVIL--------------------------KPGESNGKDQGADSGVWLCYHVLGLVQHLPGFQPVPTKVKDYISFPKVNGYQSLHTALMYKG--QSVEVQIRTQFMHQVAEYGMASHW---AYKDEKKRNSMGLYNTPWLSSIKE----------WQQDAVSS----------------------------------RDFVDCVRRELLGK-------RVFVFLRNGKILNL------------------ARGATAVDAAFQIHTELG-----LQMHGVEINGKPVPISYELKNGDVVSILTRDSAKPSSEWMRFAKSRSTRSK 494          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|1210526390|dbj|GAX14878.1| (GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fistulifera solaris])

HSP 1 Score: 272.322 bits (695), Expect = 7.911e-73
Identity = 168/426 (39.44%), Postives = 238/426 (55.87%), Query Frame = 0
Query:  166 EELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTR----RELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFAR-DTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRA--LCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALW 584
            +++ P VNYL G +  AKI  ALQVAY AH GQ+R+SGEPF+ HP++VA +L  L+MD +++ AGLLHDTVEDT ++   I+ +FG  VR +VEGETKVSKLPK ++   +SE    S             +P   D+Q  NL  + +AM +D+R+++VKLADRLHNMRTL  M P KQ KI+RETLD++ PLA ++G+W+ K+ELED AF  L+  EH  + R L       RE L    +     RRL   + L            A +   V V+  +K+ Y L+ + +T     +D   D++ L+VV++ +  A     +E                        +DR   LC  VL  +Q         +RV+DYISFP  NGYQ+LH  L + G    +EV + T +M QVA+YG+ + W
Sbjct:  118 DQIMPTVNYL-GTEKVAKIYHALQVAYTAHRGQMRKSGEPFIIHPVQVAILLAGLKMDGETVIAGLLHDTVEDTEMTFDQIETLFGKTVRTIVEGETKVSKLPKMVAEYSSSEDALISE------------SPTHHDEQAENLRQMFVAMTEDYRIIIVKLADRLHNMRTLRHMKPLKQIKISRETLDIFAPLAHRMGIWQFKSELEDTAFMYLYPQEHKRLNRMLRQHQTKYRETLDK--SQLVMQRRLDADSTL------------AHQAAKVEVQGRTKELYSLWHKMETKGVHNLDNIVDVVALRVVITPKSDADLGDENE------------------------SDRGVWLCYHVLGLVQHLPGFQPVPTRVKDYISFPKPNGYQSLHTALILNG--QTIEVQIRTSYMHQVAEYGMASHW 490          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|1210519529|dbj|GAX21653.1| (GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fistulifera solaris])

HSP 1 Score: 268.855 bits (686), Expect = 1.297e-71
Identity = 167/426 (39.20%), Postives = 241/426 (56.57%), Query Frame = 0
Query:  166 EELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTR----RELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFAR-DTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRA--LCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALW 584
            +++ P+VNYL G +  AKI  ALQVAY AH GQ+R+SGEPF+ HP++VA +L  L+MD +++ AGLLHDTVEDT ++   I+ +FG  VR +VEGETKVSKLPK ++   +S +           A  +E +P   D+Q  NL  + +AM +D+R+++VKLADRLHNMRTL  M P KQ KI+RETLD++ PLA ++G+W+ K+ELED AF  L+  E+  + R L       RE L    +     RRL   + L            A +   V V+  +K+ Y L+ + +T     +D   D++ L+VV++ +  A     +E                        +DR   LC  VL  +Q         +RV+DYISFP  NGYQ+LH  L + G    +EV + T +M QVA+YG+ + W
Sbjct:  122 DQIMPVVNYL-GTEKVAKIYHALQVAYTAHRGQMRKSGEPFIIHPVQVAILLAGLKMDGETVIAGLLHDTVEDTEMTFDQIETLFGKTVRTIVEGETKVSKLPKMVAEYSSSSE----------DAMMSE-SPTHHDEQAENLRQMFVAMTEDYRIIIVKLADRLHNMRTLRHMKPLKQIKISRETLDIFAPLAHRMGIWQFKSELEDTAFMYLYPQEYKRLNRMLRQHQTKYRETLDK--SQLVMQRRLDADSTL------------AHQAAKVEVQGRTKELYSLWHKMETKGVHNLDNIVDVVALRVVITPKSDADLGDENE------------------------SDRGVWLCYHVLGLVQHLPGFQPVPTRVKDYISFPKPNGYQSLHTALILNG--QTIEVQIRTSYMHQVAEYGMASHW 495          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|219115159|ref|XP_002178375.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410110|gb|EEC50040.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 253.832 bits (647), Expect = 3.145e-70
Identity = 197/601 (32.78%), Postives = 282/601 (46.92%), Query Frame = 0
Query:  170 PLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFAR-DTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRA--LCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALWDGPASATEASLDATYIAQEPVAQLKEQHETHAPNQRLQSSAVSAEGASGSASAGDSATAVPLELGWLQSLSAQTKRVVRDKPSMTAQQLIGTLQEQLAVKR-LVLTSDGNVLSLDVPQGKAGVTVRDAAAAQLSGATASIAERSSESSLTGSLQQLEVAGASVNGQPVSLSRPLLTGDVVDFV 766
            P V+YL G D  AKI  AL VAY AH GQ+R+SGEPF+ HP+EV+ +L+ L+MDA+++ +GLLHDTVEDT ++   ++ +FG  VR +VEGETKVSKLPK                  +  A+ A       D+Q  NL  + +AM  D+R+++VKLADRLHNMRTL +M   KQ KI+RETLD++ PLA ++G+W+ K+ELED +F  L+  E+  + R L         LH   F          L   L   L S    + + V V   +K+ Y L+ + +T     +D   D++ L+VV+S      P   S  A  +  S  S              DR   LC   L  +Q         +RV+DYISFP  NGYQ+LH  L + G    +EV + T  M QVA+YG+ + W                                        A + +   GS    +   + P    WL S+       V      +++  + +++ +L  KR  V   +G +L+L       G T  D AA Q+                      L + G  +NG+PV LS  L  GDVV  +
Sbjct:    2 PTVSYL-GTDAVAKIYQALCVAYRAHRGQMRKSGEPFIVHPVEVSLLLSGLKMDAETVMSGLLHDTVEDTDLTFQQVETLFGHTVRSIVEGETKVSKLPK------------------LAFAEYA-------DEQAENLRQMFVAMTSDYRIIIVKLADRLHNMRTLRYMKSEKQIKISRETLDIFAPLAHRMGIWQFKSELEDTSFMYLYPQEYKRLNRRL--------RLHQQSFQETLEKAQDILQRQLN--LDSTLQQQAYKVEVSGRTKEIYSLWHKMETKNVQNLDHIVDVVALRVVIS------PRDKSVEADKSELSNDS--------------DRGVWLCYHALGLVQHLPGFVPVPTRVKDYISFPKPNGYQSLHTALILNG--QTIEVQIRTSMMHQVAEYGMASHW----------------------------------------AYTDDKRRGS---NEELYSTP----WLSSIKEWQNEAV------SSRDFVDSVRRELLGKRVFVFLRNGKILNL-----ARGATAID-AAFQIHTEVG-----------------LSMHGVEINGKPVPLSYELQNGDVVSIL 468          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|397569561|gb|EJK46819.1| (hypothetical protein THAOC_34498 [Thalassiosira oceanica])

HSP 1 Score: 263.077 bits (671), Expect = 9.806e-70
Identity = 162/431 (37.59%), Postives = 241/431 (55.92%), Query Frame = 0
Query:  153 ISPADAAFLDKTREELKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRL--ESKQPYQLFAR-DTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKADRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGL 580
            + P D   ++   ++L P V+YL G ++ AKI+ AL+VAY AH  Q R+SGEP++ HP+EVA +L+ ++MDAD++ AGLLHDTVEDT ++   I+A+FG  V+ +VEGETKVSKLPK                  +  AD A       D+Q  NL  + +AM  D+R+++VKLADRLHNMRTL  M P KQ+KI+RETLD++ PLA ++G+W  K+ELED AF  L+  E+  + + L  R++      TN               AL + L+S   ++  DV + +   +K+ Y L+ + +   +  +D   DL+ L+V+++      P   S+G       P+ +                LC  VL  +Q         ++V+DYISFP  NGYQ+LH  L   G    +EV + T +M QVA+YG+
Sbjct:  250 LGPDDDVEVEGYWDQLLPTVSYL-GTENAAKIKKALRVAYCAHRPQKRKSGEPYIIHPVEVALLLSGMKMDADTVMAGLLHDTVEDTDLTFEQIEAMFGTEVKNIVEGETKVSKLPK------------------LAFADYA-------DEQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPAKQQKISRETLDIFAPLAHRMGLWPFKSELEDTAFMYLYPDEYTRLNQRLRLRQKKFEETLTNTVN------------ALEKTLQSDPTIQSQDVEIEVVGRTKELYSLWHKMEMKHDRNLDHITDLVALRVILT------PRGKSKGG--ADGDPADSGT-------------WLCYHVLGLVQHLPGFQPMPTKVKDYISFPKPNGYQSLHTALMYSG--QSIEVQIRTAYMHQVAEYGM 619          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|502921949|ref|WP_013156925.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Meiothermus silvanus] >gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946])

HSP 1 Score: 255.758 bits (652), Expect = 8.391e-69
Identity = 166/423 (39.24%), Postives = 240/423 (56.74%), Query Frame = 0
Query:  168 LKPLVNYLPGRDDQAKIETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRRELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGAL----KGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSSASQPRRRDRRDLKA--DRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALW 584
            L+P + YLP   +Q ++ TAL+ A+ AH GQ+R+SGEP++ HP+ VA+IL EL +DA+++ AGLLHDTVEDT V   DI+  FG AVRR+VEGETKVSKL K       + QV             AE  P L + +  +L  + +AMA+D R+++VKLADRLHN+RTL FM P KQ +IARETL++Y PLA +LG+ ++K ELEDL+F+ L    +A          +LL  L ++R  + R +      EAL  +L+    L    +G++VT R  +K  Y ++ +      A++   DLL L+V++                          +PR     + KA  ++ +C  VL  +   L  P    RV+DYI+ P  NGYQ+LH  + + G   PLEV + T  M Q+A+YG+ A W
Sbjct:   16 LEPKIAYLPP-AEQGRVRTALEFAFAAHQGQLRKSGEPYIVHPVAVAEILAELGLDAETLMAGLLHDTVEDTEVKPEDIEERFGTAVRRIVEGETKVSKLYK------LAHQV-------------AEERPSLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQTRIARETLEIYAPLAHRLGIGQIKWELEDLSFRYLEPEAYA----------DLLGRLKSHR--AEREAAVERGKEALEAVLQRDSVLGASIQGYEVTGR--TKHLYSIWKKMQREGRALEQIYDLLALRVIL--------------------------EPRPTPNLEEKAMREKQVCYHVLGLVHA-LWQPIP-GRVKDYIAVPKPNGYQSLHTTV-IAGSGLPLEVQIRTREMHQIAEYGIAAHW 375          
BLAST of EWM29759.1 vs. NCBI_GenBank
Match: gi|545706020|ref|XP_005705328.1| (guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria sulphuraria] >gi|452821782|gb|EME28808.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria sulphuraria])

HSP 1 Score: 254.988 bits (650), Expect = 3.079e-68
Identity = 165/438 (37.67%), Postives = 243/438 (55.48%), Query Frame = 0
Query:  159 AFLDKTREELKPLVNYLPGRDDQAK---------IETALQVAYHAHMGQVRRSGEPFVRHPIEVAKILTELRMDADSIAAGLLHDTVEDTPVSVADIQAVFGAAVRRLVEGETKVSKLPKRLSRAGASEQVGASGAGGVGGADAAEVAPPLTDDQLANLLHLLMAMAQDFRVLVVKLADRLHNMRTLGFMSPTKQEKIARETLDVYVPLARKLGVWRLKTELEDLAFKTLHAPEHAAMTRALDTRR-ELLASLHTNRFGSRRLSMTAALTEALPRLLKSRGALKGHDVTVRLESKQPYQLFARDTAVEGAIDTQPDLLTLKVVVSSEHVAGPSSWSEGAPYTSQSPSS-ASQPRRRDRRDLKA-DRALCMMVLEEIQTELRSPSSHSRVRDYISFPLDNGYQALHDELRVPGFPFPLEVHVNTDWMEQVAQYGLLALW 584
            +F+    E+L+P+  Y    + Q           I++ALQ+AY AH  Q R SG+PF+ HP+ VA IL ELRMD D+I AGLLHDTVEDT V+++ I+ +FG  VRR+VEGETKVSKLPK                     AD +       D Q  NL  L +AM +D+R+++VKLADRLHNMRTL FM   K+ KIA+ETLD++ PLA +LG+W++K ELE L F  L+  E+  + + ++ +  + +  L  +R          AL  AL   +  + ++   +V+ R+  K+ Y L+ +       I+   DL+ L+V+++ +            P   +  SS ASQ    +R+ L+  +++LC   L  +   +  P    RV+DYI+FP +NGYQ+LH  +   G   PLEV + T  M  VA+YG+ A W
Sbjct:   72 SFVKLPHEKLQPVEYYWSQLETQLTYHSTSDLRVIKSALQLAYQAHELQKRHSGDPFITHPVAVANILAELRMDRDTIVAGLLHDTVEDTEVTLSTIEQLFGMEVRRIVEGETKVSKLPKM--------------------ADIS------IDKQAENLRQLFIAMTEDWRIIIVKLADRLHNMRTLQFMKQAKRHKIAKETLDIFAPLAHRLGMWQIKAELERLGFMYLYPSEYEEIRQLVEKKLPKYMRVLEESR---------QALKTALQNDVILQQSVAQVEVSARI--KELYSLWKKMQQHGKDIEDIYDLVALRVLITPK------------PMQLECCSSDASQCNEWNRKMLETLEKSLCYYTLGIVHA-MWQPFP-CRVKDYIAFPKENGYQSLHTTVMAGGAQAPLEVQIRTLEMHLVAEYGMAAHW 458          
The following BLAST results are available for this feature:
BLAST of EWM29759.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112339|gb|EWM29759.1|0.000e+0100.00ppgpp synthetase [Nannochloropsis gaditana][more]
gi|299470307|emb|CBN78357.1|3.352e-8036.44Guanosine polyphosphate pyrophosphohydrolases/synt... [more]
gi|676392011|ref|XP_009039283.1|6.816e-7734.41hypothetical protein AURANDRAFT_10270, partial [Au... [more]
gi|223998738|ref|XP_002289042.1|5.308e-7632.06GTP pyrophosphokinase-like protein, partial [Thala... [more]
gi|1210526390|dbj|GAX14878.1|7.911e-7339.44GTP diphosphokinase / guanosine-3',5'-bis(diphosph... [more]
gi|1210519529|dbj|GAX21653.1|1.297e-7139.20GTP diphosphokinase / guanosine-3',5'-bis(diphosph... [more]
gi|219115159|ref|XP_002178375.1|3.145e-7032.78predicted protein, partial [Phaeodactylum tricornu... [more]
gi|397569561|gb|EJK46819.1|9.806e-7037.59hypothetical protein THAOC_34498 [Thalassiosira oc... [more]
gi|502921949|ref|WP_013156925.1|8.391e-6939.24bifunctional (p)ppGpp synthetase/guanosine-3',5'-b... [more]
gi|545706020|ref|XP_005705328.1|3.079e-6837.67guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna902rna902Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications