EWM21663.1, cds9010 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|585101924|gb|EWM21663.1| (beta-lactamase [Nannochloropsis gaditana]) HSP 1 Score: 483.026 bits (1242), Expect = 1.674e-172 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 Query: 1 MGGGTWTNAVAPFVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVLDLWGQDMDGQEREGGREGGREGGRVGRGRGTEGGAEGRRGRREVTLK 237 MGGGTWTNAVAPFVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVLDLWGQDMDGQEREGGREGGREGGRVGRGRGTEGGAEGRRGRREVTLK Sbjct: 1 MGGGTWTNAVAPFVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVLDLWGQDMDGQEREGGREGGREGGRVGRGRGTEGGAEGRRGRREVTLK 237
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1180611654|ref|WP_084097290.1| (serine hydrolase [Cyclobacterium lianum]) HSP 1 Score: 116.701 bits (291), Expect = 8.117e-27 Identity = 72/190 (37.89%), Postives = 105/190 (55.26%), Query Frame = 0 Query: 13 FVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH-------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETT-PLRREITIRHLLTHTGGFVYG-DGGDTVVDEMYRAAKVLDLW 193 F L++FAI+ A Q +P+ + P+ VG+S++ R+ +L + A+ +PG+V ++ R+GKI+ Q G N IFR+ SQSK IT+ A ++ ++ F L+DPI K+IPEF+ V+VN TT P REITIRHLLTHT G YG GD + +Y A DL+ Sbjct: 10 FWLISFAIIQSNAQTNSQQK--SPF-LTTGNPESVGMSSERLDRVDAMLQEAVADNTIPGAVALIVRNGKIVFHQAYGQANAEGKELRKDAIFRIASQSKAITSTAVMMLWEEGKFQLDDPISKYIPEFKNPEVLVNFRYADTTYTTRPAEREITIRHLLTHTSGLGYGVIDGDERMKMIYHKAGTTDLF 196
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1110437587|emb|SHN12268.1| (CubicO group peptidase, beta-lactamase class C family [Cyclobacterium lianum]) HSP 1 Score: 116.316 bits (290), Expect = 1.186e-26 Identity = 72/190 (37.89%), Postives = 105/190 (55.26%), Query Frame = 0 Query: 13 FVLLAFAILGEGAPHRWTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH-------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETT-PLRREITIRHLLTHTGGFVYG-DGGDTVVDEMYRAAKVLDLW 193 F L++FAI+ A Q +P+ + P+ VG+S++ R+ +L + A+ +PG+V ++ R+GKI+ Q G N IFR+ SQSK IT+ A ++ ++ F L+DPI K+IPEF+ V+VN TT P REITIRHLLTHT G YG GD + +Y A DL+ Sbjct: 27 FWLISFAIIQSNAQTNSQQK--SPF-LTTGNPESVGMSSERLDRVDAMLQEAVADNTIPGAVALIVRNGKIVFHQAYGQANAEGKELRKDAIFRIASQSKAITSTAVMMLWEEGKFQLDDPISKYIPEFKNPEVLVNFRYADTTYTTRPAEREITIRHLLTHTSGLGYGVIDGDERMKMIYHKAGTTDLF 213
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1200484106|gb|OUV98859.1| (hypothetical protein CBD16_09325 [Betaproteobacteria bacterium TMED156]) HSP 1 Score: 115.931 bits (289), Expect = 1.333e-26 Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 0 Query: 34 ATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH--------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVN---ATQGAAIETTPLRREITIRHLLTHTGGFVYG----DGGDTVVDEMYRAAKVLDLWGQDMDGQE 201 A P++ P+ +GVS++ R+ + +K +E+K+PG VV++ R GKII + G +P IFR+FS +KPIT+ TL+ V+ L DP+ K++PE + +RV VN A AAI+T P + I I LL HT GF YG G VV++MY A + D Q++ +E Sbjct: 20 AFPHNFETVKPELLGVSSERLNRITDVFNKKISEKKIPGYVVLVMRSGKIIFHKAEGKQDPQKNSKMSKESIFRIFSMTKPITSIGTLMLVEQGKIKLTDPVAKYLPELKNMRVAVNQNTAKSAAAIKTKPAKNSIRIIDLLRHTAGFTYGYFKAYPGGGVVEQMYIDAGMHD---QNISNKE 199
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|739461511|ref|WP_037321460.1| (serine hydrolase [Salegentibacter sp. Hel_I_6]) HSP 1 Score: 114.775 bits (286), Expect = 3.441e-26 Identity = 64/177 (36.16%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 31 QAPATPYS--MPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH-------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQG-AAIETTPLRREITIRHLLTHTGGFVYGD-GGDTVVDEMYRAAKVLDLWGQD 196 Q P+ S + A P EVG+S++ +++ +L E+++PG+VV++AR GKI+ + G N IFRL SQ+K ITA A ++ ++ F L+DPI K+IPEF+ +++ N + ++ +TP EITIRHLLTHT G YG D + ++Y A + +L+ ++ Sbjct: 23 QTPSVNNSGTLQSAAPAEVGMSSERIQKIEEMLQSAIEEKQIPGAVVLIARDGKIVFHEAYGEANASGKKLAKDAIFRLASQTKAITATAVMMLWEEGKFRLDDPISKYIPEFKDPKILKNFNEADSSFTSTPAENEITIRHLLTHTSGLGYGAIDSDERIKKIYAKAGITELFTEE 199
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1147711509|gb|AQQ75278.1| (hypothetical protein, partial [uncultured bacterium]) HSP 1 Score: 112.079 bits (279), Expect = 8.285e-26 Identity = 57/164 (34.76%), Postives = 97/164 (59.15%), Query Frame = 0 Query: 39 MPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH--------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVN----ATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVL 190 +P P+EVG+++ ++ ++++ AE+++PG++ ++AR GKI ++ G + I R++S SKPIT+ A ++ ++ F L DP+ K++PEF ++V + T ++T P +R IT+R LL HT G YG GDT+VD YR AK+L Sbjct: 35 LPAVAPEEVGMASSRLAHIRSVMNRHVAEKRIPGAIGLIARRGKIAYQETFGMADVEAGKPMRIDTIHRIYSMSKPITSVAVMMLYEEGKFQLNDPVAKYLPEFAKMQVGIEEKDPQTGNLTLKTAPAKRPITVRDLLRHTAGLTYGVFGDTLVDREYRKAKIL 198
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1147711501|gb|AQQ75272.1| (hypothetical protein, partial [uncultured bacterium]) HSP 1 Score: 111.694 bits (278), Expect = 8.638e-26 Identity = 57/164 (34.76%), Postives = 97/164 (59.15%), Query Frame = 0 Query: 39 MPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPHY--------IFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVN----ATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVL 190 +P P+EVG+++ ++ ++++ AE+++PG++ ++AR GKI ++ G + I R++S SKPIT+ A ++ ++ F L DP+ K++PEF ++V + T ++T P +R IT+R LL HT G YG GDT+VD YR AK+L Sbjct: 35 LPAVAPEEVGMASSRLAHIRSVMNRHVAEKRIPGAIGLIARRGKIAYQETFGMADVETGKPMRIDTIHRIYSMSKPITSVAVMMLYEEGKFQLNDPVAKYLPEFAKMQVGIEEKDPQTGNLTLKTAPAKRPITVRDLLRHTAGLTYGVFGDTLVDREYRKAKIL 198
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1073660195|ref|WP_070055319.1| (serine hydrolase [Salegentibacter salarius] >gi|1073504888|gb|OEY71452.1| serine hydrolase [Salegentibacter salarius] >gi|1158454858|emb|SLJ91530.1| CubicO group peptidase, beta-lactamase class C family [Salegentibacter salarius]) HSP 1 Score: 113.235 bits (282), Expect = 1.410e-25 Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = 0 Query: 38 SMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDNPH-------YIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQG-AAIETTPLRREITIRHLLTHTGGFVYGD-GGDTVVDEMYRAAKVLDLWGQD 196 ++ A P EVG+S++ +++ +L E ++PG+V ++AR GKI+ + G N IFRL SQ+K ITA A ++ ++ F L+DP+ K+IPEF+ +++ N + ++ +TP EITIRHLLTHT G YG GD + ++Y A + +L+ ++ Sbjct: 32 TLESATPAEVGMSSERIQKIEEMLQSAIEENQIPGAVALIARDGKIVFHEAYGEANASRKELEKDAIFRLASQTKAITATAVMMLWEEGKFRLDDPVSKYIPEFKDPKILKNFNEADSSFTSTPAENEITIRHLLTHTSGLGYGAIDGDERIKKIYAKAGITELFTEE 199
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|1056719150|ref|WP_068143571.1| (hypothetical protein [Kordiimonas lipolytica]) HSP 1 Score: 112.464 bits (280), Expect = 2.246e-25 Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 29 WTQAPATPYSMPYAYPQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDN----------PHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYRAAKVLD 191 W+ P MP A P++VG+S + + D E K+ G ++ARHGK++ + Y + + IFR++S +KP+T A ++ ++ FSL+DP+ ++PEF RV + + +ET P +REITIR L+ HT G YG DT VD++Y+ VL+ Sbjct: 14 WSVMPTEAADMPTAAPEDVGLSATVLDDMTRHFDAYVREGKLTGLTTLVARHGKVV--HFKAYGDRKLASDVALGKNDIFRIYSMTKPVTGVALMMLYEEGRFSLDDPVGAYLPEFAGARVFKSEREDGTVETVPAKREITIRDLMRHTAGLTYGLFADTPVDKLYQKNGVLE 184
BLAST of EWM21663.1 vs. NCBI_GenBank
Match: gi|760868912|dbj|BAQ46508.1| (beta-lactamase [Methylobacterium aquaticum]) HSP 1 Score: 112.079 bits (279), Expect = 2.592e-25 Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 0 Query: 44 PQEVGVSNDITGRLQPLLDKLTAERKVPGSVVMMARHGKIILEQWSGYDN--------PHYIFRLFSQSKPITAAATLICVDDELFSLEDPIVKFIPEFRTLRVIVNATQGAAIETTPLRREITIRHLLTHTGGFVYGDGGDTVVDEMYR 185 P+ VG+S++ GR+ P + K+PG V +AR G+++ G + I R++S +KP+T+ A L+ ++ LF L+DPI +F+PEFR +RV+V ++G ET P R+IT R LLTHT G YG T+VD MYR Sbjct: 8 PEAVGLSSERLGRIVPWMRGYVEAGKLPGLSVTVARRGQVVFSHQEGLRDLARGLPMEADTIVRIYSMTKPLTSVAILMLYEEGLFQLDDPITRFLPEFRDMRVLVGGSRGKP-ETVPAERDITFRDLLTHTSGLSYGFMDATLVDRMYR 156 The following BLAST results are available for this feature:
BLAST of EWM21663.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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