EWM21683.1, cds8990 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|585101962|gb|EWM21683.1| (glutamate cysteine ligase [Nannochloropsis gaditana]) HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP 289
MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP
Sbjct: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP 289
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|813128418|ref|XP_012197537.1| (hypothetical protein SPRG_03567 [Saprolegnia parasitica CBS 223.65] >gi|641537803|gb|KDO31647.1| hypothetical protein SPRG_03567 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 172.17 bits (435), Expect = 4.120e-45 Identity = 92/219 (42.01%), Postives = 125/219 (57.08%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAG--FVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
M AH ++ +E F+FR+HLAPP + KAG S++C D + A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD T R + YL I +R +GE T A WMR+ V HP+Y DSVV+PSIA+DLM C +IGEG LQCP+LLG+V+++PI AY V L + +R ELLR Y +R
Sbjct: 549 MEIAHRVNAATEESFFFRRHLAPP---------------------DVDECHKAGCHVQCSATCVDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHINCDDTTRRLLDKYLALIAKRATGELPTAATWMRRFVCSHPDYHHDSVVSPSIAHDLMDVCAKIGEGALQCPELLGDVRVEPIRGNTAYQVPLKSESVDTTKRCELLRRYVQR 746
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1210515229|dbj|GAX25941.1| (glutamate--cysteine ligase catalytic subunit [Fistulifera solaris]) HSP 1 Score: 172.94 bits (437), Expect = 4.740e-45 Identity = 102/256 (39.84%), Postives = 136/256 (53.12%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAP------------------PLPSAAASEKSEKPEP-------PENPDKAFEGAQ----KAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKG 227
M++AH R++ K KF+FR+HLAP L +A + E + P G + +A A S ++H YE MS+ EI+ GKGDYF GLIPL H YLD+I CD+ T R+ YLDF+ RR GE +T A WMR V+ HP+Y++DS+VT IAYDLM+ C+ IG G+L P+LLG I+PI AYDV L ++ NR+ LLR Y R+ F K G
Sbjct: 701 MQRAHSRNASAKGKFFFRRHLAPLEEGDDGYGVKYVSMFSSALNGSAVALDDESDNVDGLVTSGTDTPITTLVGKEVSQREAAPCALGSSEEH-------SYEEMSMAEIMCGKGDYFPGLIPLVHAYLDHISCDKVTRERLDKYLDFLERRAKGELVTPATWMRTFVRNHPKYKRDSIVTDEIAYDLMVACRDIGLGKLHVPELLGPYAIEPITTEGAYDVPLQTTRVRNRQLLGLLRRYTSRQSFARSKGDGSS 949
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|219117900|ref|XP_002179736.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408789|gb|EEC48722.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 171.785 bits (434), Expect = 5.891e-45 Identity = 89/221 (40.27%), Postives = 124/221 (56.11%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTH 221
M++AH R+S K KF+FR+H+AP EG G + +E M++ EI+NGKGD+F GLI L YLD+I CD+ T +R+ YL FI +R +GE +T A WMR V+ HP Y+QDS+++ IAYDLM+ C+ IG+G+L P+LLG+ IDPI AYDV L ++ N +LLR Y +R+ F H
Sbjct: 551 MQRAHSRNSAAKGKFFFRRHMAP----------------------LQEGDDGYGV-----------NSEENSFEEMTMNEIMNGKGDHFPGLIVLILAYLDHINCDKVTLKRLENYLTFIAKRATGELVTPATWMRNFVRNHPAYEQDSILSDEIAYDLMIACRDIGQGKLHVPELLGDNIIDPITSEGAYDVKLDSKRVQNDRILDLLRQYTKRKSFSAH 738
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|669147544|ref|XP_008609334.1| (hypothetical protein SDRG_05398 [Saprolegnia diclina VS20] >gi|530738930|gb|EQC37172.1| hypothetical protein SDRG_05398 [Saprolegnia diclina VS20]) HSP 1 Score: 170.629 bits (431), Expect = 1.307e-44 Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAG--FVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
M AH ++ +E F+FR+HLAPP + KAG S++C D + A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD T R + YL I +R +GE T A WMR+ V HP+Y DSVV+PSIA+DLM C +IGEG LQCP+LLG+V+++PI AY V L + +R LLR Y +R
Sbjct: 549 MEIAHRVNAATEESFFFRRHLAPP---------------------DVDECHKAGCHIQCSATCVDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHINCDDTTRRLLDKYLALIAKRATGELPTAATWMRRFVCSHPDYHHDSVVSPSIAHDLMDVCAKIGEGALQCPELLGDVRVEPIRGNTAYQVPLKSESVDTTKRCALLRRYVQR 746
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|635370766|emb|CCI41029.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 170.629 bits (431), Expect = 1.435e-44 Identity = 93/215 (43.26%), Postives = 124/215 (57.67%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
M AH ++VL EKF+FR HLAPP ASE + E+PD+ YELM++ EI+ GKG YF GLIP+ + YLDYI CD T + + YLD I +R +GE T A WMR+ V+ HPEY++DSVV+ SIAYDL++ C+ IGEG CPDLLG+ KI+P+ Y V L + + R +LL+ Y +R
Sbjct: 541 MEAAHRINAVLNEKFYFRCHLAPPEEGDCASENV-RCAFHEDPDR---------------------------YELMTIAEIMMGKGSYFTGLIPIIYAYLDYIECDDVTRQTILKYLDLIIKRATGELPTIATWMRQFVRGHPEYKKDSVVSSSIAYDLLVNCQDIGEGVKHCPDLLGDFKIEPVRGQAKYQVPLKTDGVQASMRQKLLQRYVQR 727
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|635370765|emb|CCI41028.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 170.244 bits (430), Expect = 1.708e-44 Identity = 93/215 (43.26%), Postives = 124/215 (57.67%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
M AH ++VL EKF+FR HLAPP ASE + E+PD+ YELM++ EI+ GKG YF GLIP+ + YLDYI CD T + + YLD I +R +GE T A WMR+ V+ HPEY++DSVV+ SIAYDL++ C+ IGEG CPDLLG+ KI+P+ Y V L + + R +LL+ Y +R
Sbjct: 550 MEAAHRINAVLNEKFYFRCHLAPPEEGDCASENV-RCAFHEDPDR---------------------------YELMTIAEIMMGKGSYFTGLIPIIYAYLDYIECDDVTRQTILKYLDLIIKRATGELPTIATWMRQFVRGHPEYKKDSVVSSSIAYDLLVNCQDIGEGVKHCPDLLGDFKIEPVRGQAKYQVPLKTDGVQASMRQKLLQRYVQR 736
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1210512857|dbj|GAX28155.1| (glutamate--cysteine ligase catalytic subunit [Fistulifera solaris]) HSP 1 Score: 170.244 bits (430), Expect = 4.567e-44 Identity = 99/251 (39.44%), Postives = 133/251 (52.99%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAP--------------PLPSAAASEKSEKPEPPENPDKAFEGA---------------QKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHK 222
M++AH R++ K KF+FR+HLAP SA + +N D ++A A S ++H YE MS+ EI+ GKGDYF GLIPL H YLD+I CD+ T R+ YLDF+ RR GE +T A WMR V+ HP+Y++DS+VT IA+DLM+ C+ IG G+L P+LLG I+PI AYDV L ++ NR+ LLR Y R+ F K
Sbjct: 701 MQRAHSRNASAKGKFFFRRHLAPLEEGDDGYGVKYVSMFSSALNGSAVALDDESDNVDGIVTSGTSTPMTTLVGKEVSQREAAPCALGSSEEH-------SYEEMSMAEIMCGKGDYFPGLIPLVHAYLDHISCDKVTRERLDKYLDFLERRAKGELVTPATWMRTFVRNHPKYKRDSIVTDEIAFDLMVACRDIGLGKLHVPELLGPYAIEPITTEGAYDVPLQTTRVRNRQLLGLLRRYTSRQSFARSK 944
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1173944732|gb|OQR93434.1| (glutamate-cysteine ligase catalytic subunit [Achlya hypogyna]) HSP 1 Score: 168.703 bits (426), Expect = 5.886e-44 Identity = 90/217 (41.47%), Postives = 126/217 (58.06%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
M AH ++ +E F+FR+HLAPP + D+ S++C D + A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD T R + YL I +R +GE T AAWMR+ V+ HP+Y DSVVTP+IA+DL+ C +IGEG L CP+LLG+V+I+PI AY V L + +RSELL+ Y +R
Sbjct: 542 MEIAHRVNAATEEVFYFRRHLAPP-----------------DVDECHRA--DCHVQCSATCLDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHIQCDDTTRRLLDKYLALIAKRATGELPTAAAWMRRFVRAHPDYAHDSVVTPAIAHDLLDTCAKIGEGTLPCPELLGDVRIEPIRGNTAYQVPLKSESVDTAKRSELLQRYVQR 739
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|397596199|gb|EJK56710.1| (hypothetical protein THAOC_23355 [Thalassiosira oceanica]) HSP 1 Score: 168.318 bits (425), Expect = 1.954e-43 Identity = 94/244 (38.52%), Postives = 133/244 (54.51%), Query Frame = 0
Query: 1 MRKAHERDSVLKEKFWFRKHLAP---------------------------PLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTA-DEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRRE 216
M++AH RD+ ++ KF+FR+HLAP PLP+ ++ E + A ++K ++S GT + YE M++ EI+ GKGDYF GLIPL H YLDYI CD T RVS YLDFI +R +G+ +T A W+R ++ H +Y DSVV+ SIAYDLM+ C+ IGEG+ P+LLG++KI PI AY + + N + +LL Y R+
Sbjct: 793 MQRAHGRDAAVRGKFFFRRHLAPLEKGDDGYGEQYASMFSSSGGSSLETGPLPTISSMEDLSATDASSGNSDANGVSEKRRVAPNAS------GGTEENSYEEMTLAEIMVGKGDYFPGLIPLVHAYLDYIQCDSVTLERVSQYLDFIEKRATGQLVTPATWIRNFIRSHEDYNFDSVVSDSIAYDLMVACQEIGEGKRHVPELLGDIKIKPIAASGAYTSKMDSRRANNAQIVDLLARYAERK 1030 The following BLAST results are available for this feature:
BLAST of EWM21683.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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