EWM21683.1, cds8990 (CDS) Nannochloropsis gaditana

Overview
NameEWM21683.1
Unique Namecds8990
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:119716..120026 +
Alignment locationKK037251.1:120248..120374 +
Alignment locationKK037251.1:120727..120804 +
Alignment locationKK037251.1:121106..121459 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21683.1
Productglutamate cysteine ligase
Orig transcript idgnl|cribi|Naga_101017g1.3806.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:119716..120026 +
KK037251.1supercontigKK037251.1:120248..120374 +
KK037251.1supercontigKK037251.1:120727..120804 +
KK037251.1supercontigKK037251.1:121106..121459 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006750glutathione biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004357glutamate-cysteine ligase activity
Vocabulary: INTERPRO
TermDefinition
IPR004308GCS
Homology
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|585101962|gb|EWM21683.1| (glutamate cysteine ligase [Nannochloropsis gaditana])

HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP 289
            MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP
Sbjct:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKGRKDGGPEREGRRGREGRERVSRRIFPLQGVSGGRKVLGYRLEGMKEDSSWRKKGKAEGVGVP 289          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|813128418|ref|XP_012197537.1| (hypothetical protein SPRG_03567 [Saprolegnia parasitica CBS 223.65] >gi|641537803|gb|KDO31647.1| hypothetical protein SPRG_03567 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 172.17 bits (435), Expect = 4.120e-45
Identity = 92/219 (42.01%), Postives = 125/219 (57.08%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAG--FVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
            M  AH  ++  +E F+FR+HLAPP                       +   KAG     S++C D   +    A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD  T R +  YL  I +R +GE  T A WMR+ V  HP+Y  DSVV+PSIA+DLM  C +IGEG LQCP+LLG+V+++PI    AY V L    +   +R ELLR Y +R
Sbjct:  549 MEIAHRVNAATEESFFFRRHLAPP---------------------DVDECHKAGCHVQCSATCVDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHINCDDTTRRLLDKYLALIAKRATGELPTAATWMRRFVCSHPDYHHDSVVSPSIAHDLMDVCAKIGEGALQCPELLGDVRVEPIRGNTAYQVPLKSESVDTTKRCELLRRYVQR 746          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1210515229|dbj|GAX25941.1| (glutamate--cysteine ligase catalytic subunit [Fistulifera solaris])

HSP 1 Score: 172.94 bits (437), Expect = 4.740e-45
Identity = 102/256 (39.84%), Postives = 136/256 (53.12%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAP------------------PLPSAAASEKSEKPEP-------PENPDKAFEGAQ----KAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHKEGGKG 227
            M++AH R++  K KF+FR+HLAP                   L  +A +   E            + P     G +    +A   A  S ++H        YE MS+ EI+ GKGDYF GLIPL H YLD+I CD+ T  R+  YLDF+ RR  GE +T A WMR  V+ HP+Y++DS+VT  IAYDLM+ C+ IG G+L  P+LLG   I+PI    AYDV L   ++ NR+   LLR Y  R+ F   K  G  
Sbjct:  701 MQRAHSRNASAKGKFFFRRHLAPLEEGDDGYGVKYVSMFSSALNGSAVALDDESDNVDGLVTSGTDTPITTLVGKEVSQREAAPCALGSSEEH-------SYEEMSMAEIMCGKGDYFPGLIPLVHAYLDHISCDKVTRERLDKYLDFLERRAKGELVTPATWMRTFVRNHPKYKRDSIVTDEIAYDLMVACRDIGLGKLHVPELLGPYAIEPITTEGAYDVPLQTTRVRNRQLLGLLRRYTSRQSFARSKGDGSS 949          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|219117900|ref|XP_002179736.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408789|gb|EEC48722.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 171.785 bits (434), Expect = 5.891e-45
Identity = 89/221 (40.27%), Postives = 124/221 (56.11%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTH 221
            M++AH R+S  K KF+FR+H+AP                        EG    G                + +E M++ EI+NGKGD+F GLI L   YLD+I CD+ T +R+  YL FI +R +GE +T A WMR  V+ HP Y+QDS+++  IAYDLM+ C+ IG+G+L  P+LLG+  IDPI    AYDV L   ++ N    +LLR Y +R+ F  H
Sbjct:  551 MQRAHSRNSAAKGKFFFRRHMAP----------------------LQEGDDGYGV-----------NSEENSFEEMTMNEIMNGKGDHFPGLIVLILAYLDHINCDKVTLKRLENYLTFIAKRATGELVTPATWMRNFVRNHPAYEQDSILSDEIAYDLMIACRDIGQGKLHVPELLGDNIIDPITSEGAYDVKLDSKRVQNDRILDLLRQYTKRKSFSAH 738          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|669147544|ref|XP_008609334.1| (hypothetical protein SDRG_05398 [Saprolegnia diclina VS20] >gi|530738930|gb|EQC37172.1| hypothetical protein SDRG_05398 [Saprolegnia diclina VS20])

HSP 1 Score: 170.629 bits (431), Expect = 1.307e-44
Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAG--FVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
            M  AH  ++  +E F+FR+HLAPP                       +   KAG     S++C D   +    A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD  T R +  YL  I +R +GE  T A WMR+ V  HP+Y  DSVV+PSIA+DLM  C +IGEG LQCP+LLG+V+++PI    AY V L    +   +R  LLR Y +R
Sbjct:  549 MEIAHRVNAATEESFFFRRHLAPP---------------------DVDECHKAGCHIQCSATCVDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHINCDDTTRRLLDKYLALIAKRATGELPTAATWMRRFVCSHPDYHHDSVVSPSIAHDLMDVCAKIGEGALQCPELLGDVRVEPIRGNTAYQVPLKSESVDTTKRCALLRRYVQR 746          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|635370766|emb|CCI41029.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 170.629 bits (431), Expect = 1.435e-44
Identity = 93/215 (43.26%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
            M  AH  ++VL EKF+FR HLAPP     ASE   +    E+PD+                           YELM++ EI+ GKG YF GLIP+ + YLDYI CD  T + +  YLD I +R +GE  T A WMR+ V+ HPEY++DSVV+ SIAYDL++ C+ IGEG   CPDLLG+ KI+P+     Y V L  + +    R +LL+ Y +R
Sbjct:  541 MEAAHRINAVLNEKFYFRCHLAPPEEGDCASENV-RCAFHEDPDR---------------------------YELMTIAEIMMGKGSYFTGLIPIIYAYLDYIECDDVTRQTILKYLDLIIKRATGELPTIATWMRQFVRGHPEYKKDSVVSSSIAYDLLVNCQDIGEGVKHCPDLLGDFKIEPVRGQAKYQVPLKTDGVQASMRQKLLQRYVQR 727          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|635370765|emb|CCI41028.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 170.244 bits (430), Expect = 1.708e-44
Identity = 93/215 (43.26%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
            M  AH  ++VL EKF+FR HLAPP     ASE   +    E+PD+                           YELM++ EI+ GKG YF GLIP+ + YLDYI CD  T + +  YLD I +R +GE  T A WMR+ V+ HPEY++DSVV+ SIAYDL++ C+ IGEG   CPDLLG+ KI+P+     Y V L  + +    R +LL+ Y +R
Sbjct:  550 MEAAHRINAVLNEKFYFRCHLAPPEEGDCASENV-RCAFHEDPDR---------------------------YELMTIAEIMMGKGSYFTGLIPIIYAYLDYIECDDVTRQTILKYLDLIIKRATGELPTIATWMRQFVRGHPEYKKDSVVSSSIAYDLLVNCQDIGEGVKHCPDLLGDFKIEPVRGQAKYQVPLKTDGVQASMRQKLLQRYVQR 736          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1210512857|dbj|GAX28155.1| (glutamate--cysteine ligase catalytic subunit [Fistulifera solaris])

HSP 1 Score: 170.244 bits (430), Expect = 4.567e-44
Identity = 99/251 (39.44%), Postives = 133/251 (52.99%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAP--------------PLPSAAASEKSEKPEPPENPDKAFEGA---------------QKAGFVASSSCQDHIWQGTADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRREPFQTHK 222
            M++AH R++  K KF+FR+HLAP                 SA         +  +N D                     ++A   A  S ++H        YE MS+ EI+ GKGDYF GLIPL H YLD+I CD+ T  R+  YLDF+ RR  GE +T A WMR  V+ HP+Y++DS+VT  IA+DLM+ C+ IG G+L  P+LLG   I+PI    AYDV L   ++ NR+   LLR Y  R+ F   K
Sbjct:  701 MQRAHSRNASAKGKFFFRRHLAPLEEGDDGYGVKYVSMFSSALNGSAVALDDESDNVDGIVTSGTSTPMTTLVGKEVSQREAAPCALGSSEEH-------SYEEMSMAEIMCGKGDYFPGLIPLVHAYLDHISCDKVTRERLDKYLDFLERRAKGELVTPATWMRTFVRNHPKYKRDSIVTDEIAFDLMVACRDIGLGKLHVPELLGPYAIEPITTEGAYDVPLQTTRVRNRQLLGLLRRYTSRQSFARSK 944          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|1173944732|gb|OQR93434.1| (glutamate-cysteine ligase catalytic subunit [Achlya hypogyna])

HSP 1 Score: 168.703 bits (426), Expect = 5.886e-44
Identity = 90/217 (41.47%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAPPLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGT--ADEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRR 215
            M  AH  ++  +E F+FR+HLAPP                 + D+            S++C D   +    A+ +E M++ EI+ GKG Y+ GLIPL + YLD+I CD  T R +  YL  I +R +GE  T AAWMR+ V+ HP+Y  DSVVTP+IA+DL+  C +IGEG L CP+LLG+V+I+PI    AY V L    +   +RSELL+ Y +R
Sbjct:  542 MEIAHRVNAATEEVFYFRRHLAPP-----------------DVDECHRA--DCHVQCSATCLDDAAKCIHGAESFETMTIAEIMLGKGCYYPGLIPLVNAYLDHIQCDDTTRRLLDKYLALIAKRATGELPTAAAWMRRFVRAHPDYAHDSVVTPAIAHDLLDTCAKIGEGTLPCPELLGDVRIEPIRGNTAYQVPLKSESVDTAKRSELLQRYVQR 739          
BLAST of EWM21683.1 vs. NCBI_GenBank
Match: gi|397596199|gb|EJK56710.1| (hypothetical protein THAOC_23355 [Thalassiosira oceanica])

HSP 1 Score: 168.318 bits (425), Expect = 1.954e-43
Identity = 94/244 (38.52%), Postives = 133/244 (54.51%), Query Frame = 0
Query:    1 MRKAHERDSVLKEKFWFRKHLAP---------------------------PLPSAAASEKSEKPEPPENPDKAFEGAQKAGFVASSSCQDHIWQGTA-DEYELMSVEEILNGKGDYFLGLIPLCHMYLDYIGCDRETFRRVSLYLDFIGRRGSGETMTTAAWMRKVVQQHPEYQQDSVVTPSIAYDLMMECKRIGEGRLQCPDLLGNVKIDPIFPGEAYDVYLSGNKMGNRERSELLRAYRRRE 216
            M++AH RD+ ++ KF+FR+HLAP                           PLP+ ++ E     +       A   ++K     ++S       GT  + YE M++ EI+ GKGDYF GLIPL H YLDYI CD  T  RVS YLDFI +R +G+ +T A W+R  ++ H +Y  DSVV+ SIAYDLM+ C+ IGEG+   P+LLG++KI PI    AY   +   +  N +  +LL  Y  R+
Sbjct:  793 MQRAHGRDAAVRGKFFFRRHLAPLEKGDDGYGEQYASMFSSSGGSSLETGPLPTISSMEDLSATDASSGNSDANGVSEKRRVAPNAS------GGTEENSYEEMTLAEIMVGKGDYFPGLIPLVHAYLDYIQCDSVTLERVSQYLDFIEKRATGQLVTPATWIRNFIRSHEDYNFDSVVSDSIAYDLMVACQEIGEGKRHVPELLGDIKIKPIAASGAYTSKMDSRRANNAQIVDLLARYAERK 1030          
The following BLAST results are available for this feature:
BLAST of EWM21683.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101962|gb|EWM21683.1|0.000e+0100.00glutamate cysteine ligase [Nannochloropsis gaditan... [more]
gi|813128418|ref|XP_012197537.1|4.120e-4542.01hypothetical protein SPRG_03567 [Saprolegnia paras... [more]
gi|1210515229|dbj|GAX25941.1|4.740e-4539.84glutamate--cysteine ligase catalytic subunit [Fist... [more]
gi|219117900|ref|XP_002179736.1|5.891e-4540.27predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|669147544|ref|XP_008609334.1|1.307e-4441.55hypothetical protein SDRG_05398 [Saprolegnia dicli... [more]
gi|635370766|emb|CCI41029.1|1.435e-4443.26unnamed protein product [Albugo candida][more]
gi|635370765|emb|CCI41028.1|1.708e-4443.26unnamed protein product [Albugo candida][more]
gi|1210512857|dbj|GAX28155.1|4.567e-4439.44glutamate--cysteine ligase catalytic subunit [Fist... [more]
gi|1173944732|gb|OQR93434.1|5.886e-4441.47glutamate-cysteine ligase catalytic subunit [Achly... [more]
gi|397596199|gb|EJK56710.1|1.954e-4338.52hypothetical protein THAOC_23355 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9020rna9020Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications