EWM21687.1, cds8986 (CDS) Nannochloropsis gaditana

Overview
NameEWM21687.1
Unique Namecds8986
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:113441..113490 -
Alignment locationKK037251.1:113029..113260 -
Alignment locationKK037251.1:112706..112885 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21687.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101740g1.3008.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:113441..113490 -
KK037251.1supercontigKK037251.1:113029..113260 -
KK037251.1supercontigKK037251.1:112706..112885 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21687.1 vs. NCBI_GenBank
Match: gi|585101970|gb|EWM21687.1| (hypothetical protein Naga_101740g1 [Nannochloropsis gaditana])

HSP 1 Score: 312.383 bits (799), Expect = 9.631e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 
Query:    1 MLYYNQKYPEALEQLDRAIDRYETLYEQVATEERVWRAAVLSRYHGRETGLAKIRSSPPSPYGTETRRLMGAVLDLFEGRVEEEEVLAMVEEARSNPYGNYDLYGFFYIGLYRDACGLAGPARAAMEQATRALRARQDDVMYHFPRLHLLWRT 153
            MLYYNQKYPEALEQLDRAIDRYETLYEQVATEERVWRAAVLSRYHGRETGLAKIRSSPPSPYGTETRRLMGAVLDLFEGRVEEEEVLAMVEEARSNPYGNYDLYGFFYIGLYRDACGLAGPARAAMEQATRALRARQDDVMYHFPRLHLLWRT
Sbjct:    1 MLYYNQKYPEALEQLDRAIDRYETLYEQVATEERVWRAAVLSRYHGRETGLAKIRSSPPSPYGTETRRLMGAVLDLFEGRVEEEEVLAMVEEARSNPYGNYDLYGFFYIGLYRDACGLAGPARAAMEQATRALRARQDDVMYHFPRLHLLWRT 153
[Close]
BLAST of EWM21687.1 vs. NCBI_GenBank
Match: gi|299473082|emb|CBN77475.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 65.4698 bits (158), Expect = 7.941e-10
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 0 
Query:    1 MLYYNQKYPEALEQLDRAIDRYETLYEQVATEERVWRAAVLSRYHGRETG--LAKIRSS-PPSPYGTETRRLMGAVLDLFEGRVEEEEVLAMVE-EARSNPYGNYDLYGFFYIGLYRDACGLAGPARAAMEQATRALRARQDDVMYHFPRLH 148
            +LYY  +Y EA  +LD  I  +E  +E+ AT+ER+W+AA   R   RE G  + ++ ++ PP P  +E   L   V ++F G    E+V  + +  A    Y   D +   ++GLY DA G    A   +  A        DD+ YH PR+H
Sbjct:  140 ILYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIR-GAREAGADVEQVAAALPPLPI-SEPNALRRTVYNMFRGGPTPEDVQQVAKVGAGGIDYFGVDFFSEVFLGLYHDAHGNELEAETYILAACGNTYPNPDDLWYHTPRIH 289
The following BLAST results are available for this feature:
BLAST of EWM21687.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101970|gb|EWM21687.1|9.631e-108100.00hypothetical protein Naga_101740g1 [Nannochloropsi... [more]
gi|299473082|emb|CBN77475.1|7.941e-1032.89conserved unknown protein [Ectocarpus siliculosus][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9016rna9016Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications