EWM21695.1, cds8978 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|585101985|gb|EWM21695.1| (phytanoyl- dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 434.491 bits (1116), Expect = 3.021e-154 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 Query: 1 MKDLEELPLIPSRDDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRDGG 208 MKDLEELPLIPSRDDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRDGG Sbjct: 1 MKDLEELPLIPSRDDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRDGG 208
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|930019043|ref|WP_054123333.1| (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. AAP93] >gi|929697287|gb|KPF79588.1| hypothetical protein IP83_16635 [Novosphingobium sp. AAP93]) HSP 1 Score: 192.586 bits (488), Expect = 6.726e-58 Identity = 99/184 (53.80%), Postives = 127/184 (69.02%), Query Frame = 0 Query: 20 RQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLA 203 RQG Y ++ E+ + F +GY+ L GVL+EEE A +E F+ F+ G+V G+DFCDMS +G FE + LVNA+LPR Y P ++ DN+ E RA SI++QL+G+ LDYDQFL KRP++ AVF WHQD YWP TP+ T T SLAL++A ENGCLRVVPGSHR K LR HRPL+ Sbjct: 6 RQGDDYILSPEEIEQFHRDGYVTLRGVLSEEELAAIEPEFERFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIR-DNLFERRAASISRQLIGETATLDYDQFLAKRPAK----PDAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHR-KGLRPHRPLMG 183
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|1119408333|ref|WP_072383954.1| (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. NDB2Meth1]) HSP 1 Score: 188.734 bits (478), Expect = 2.144e-56 Identity = 97/184 (52.72%), Postives = 126/184 (68.48%), Query Frame = 0 Query: 20 RQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLA 203 +QG Y ++ ++ + F +GY+ L GVL+E E A +E FD F+ G+V G+DFCDMS +G FE + LVNA+LPR Y P ++ DN+ E RA SI++QL+G+ LDYDQFL KRP++ AVF WHQD YWP TP+ T T SLAL++A ENGCLRVVPGSHR K LR HRPL+ Sbjct: 6 QQGDDYILSPDEIEQFHRDGYVTLRGVLSEGELAAIEPEFDRFIRGEVAGMGRDFCDMSGPYGRKFEDFALVNAVLPRRYRPEIR-DNLFERRAASISRQLIGETATLDYDQFLAKRPAK----PDAVFTWHQDLGYWPTGTPEPLTATCSLALDDADSENGCLRVVPGSHR-KGLRPHRPLMG 183
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|917728215|ref|WP_052242506.1| (phytanoyl-CoA dioxygenase family protein [Novosphingobium subterraneum] >gi|741024641|gb|KHS44940.1| phytanoyl-CoA dioxygenase [Novosphingobium subterraneum]) HSP 1 Score: 184.496 bits (467), Expect = 1.203e-54 Identity = 99/184 (53.80%), Postives = 125/184 (67.93%), Query Frame = 0 Query: 20 RQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLA 203 RQG Y +T E+ F +GYI L GV+TEEE A LE F+ F+ G+V+ GKDFCDMS + FE + LVNA+LPR Y PSL+ DN+ E RA SI++QL+G+ LDYDQFL KRP++ AVF HQD YWP TP+ T T SLAL++A ENGCL+VVPGS ++ LR HRPL+ Sbjct: 7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVRGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLR-DNLYERRAASISRQLIGETATLDYDQFLAKRPAK----PDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQ-GLRPHRPLMG 184
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|1011449840|ref|WP_062346911.1| (phytanoyl-CoA dioxygenase family protein [Novosphingobium sp. CCH12-A3]) HSP 1 Score: 184.496 bits (467), Expect = 1.243e-54 Identity = 99/184 (53.80%), Postives = 124/184 (67.39%), Query Frame = 0 Query: 20 RQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLA 203 RQG Y +T E+ F +GYI L GV+TEEE A LE F+ F+ G+V GKDFCDMS + FE + LVNA+LPR Y PSL+ DN+ E RA SI++QL+G+ LDYDQFL KRP++ AVF HQD YWP TP+ T T SLAL++A ENGCL+VVPGS ++ LR HRPL+ Sbjct: 7 RQGDDYILTPEEIAQFHRDGYITLRGVMTEEELAPLETEFERFIRGEVSGMGKDFCDMSGPYDRAFENFSLVNAVLPRHYEPSLR-DNLYERRAASISRQLIGETATLDYDQFLAKRPAK----PDAVFTMHQDLGYWPTGTPEPLTATCSLALDDADPENGCLKVVPGSQKQ-GLRPHRPLMG 184
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|148910293|gb|ABR18226.1| (unknown [Picea sitchensis]) HSP 1 Score: 182.956 bits (463), Expect = 4.025e-54 Identity = 93/192 (48.44%), Postives = 122/192 (63.54%), Query Frame = 0 Query: 17 AARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRDGG 208 A RR+G Y + E+K+ + NGY+ L GVL+EEE LE+ F AF+ +VQV G+DFCDMS + P E + ++N MLP Y PSL+ +N+ E RA SI++QLLG D+ DYDQ L K P++ A+F WHQD AYWP T D RT + LA++ ++ ENGCL VPGSH E LR H L RD Sbjct: 2 ADRRKGDEYIVAPEEKELYKQNGYVHLKGVLSEEEIDDLEKEFMAFIRREVQVDGRDFCDMSADYSKPIENFSIINIMLPSRYKPSLK-NNIYERRAASISKQLLGHDLTFDYDQLLAKPPNKP----DAIFHWHQDLAYWP-VTKDTRTASFWLAIDNSTLENGCLHFVPGSHLEPDLRDHGSLHGNRDNS 187
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|1180803801|ref|WP_084277566.1| (hypothetical protein [Novosphingobium sp. B1] >gi|1175035933|emb|SMC37392.1| Phytanoyl-CoA dioxygenase (PhyH) [Novosphingobium sp. B1]) HSP 1 Score: 181.03 bits (458), Expect = 2.423e-53 Identity = 98/184 (53.26%), Postives = 123/184 (66.85%), Query Frame = 0 Query: 20 RQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLA 203 R G Y +T E+ F +GYI L GV+TE+E A LE F+ F+ G+V GKDFCDMS + FE + LVNA+LPR Y P+L+ DN+ E RA SI++QLLG+ LDYDQFL KRP++ AVF HQD YWP TP+ T T SLAL++A ENGCL+VVPGS ++ LR HRPLL Sbjct: 7 RNGDDYILTPEEIAQFHRDGYITLRGVMTEDELAPLEPEFERFIRGEVSGMGKDFCDMSGPYDREFENFSLVNAVLPRHYEPTLR-DNLYERRAASISRQLLGETATLDYDQFLAKRPAKP----DAVFTMHQDLGYWPTGTPEPLTATCSLALDDADLENGCLKVVPGSQKQ-GLRPHRPLLG 184
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|1026766374|gb|OAE26890.1| (hypothetical protein AXG93_4762s1000 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 183.726 bits (465), Expect = 2.506e-53 Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = 0 Query: 14 DDGAARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRD 206 DDGA RR+G Y++ E+ + + T GY+ L GVL+E+E LE+ + +F+ +V V G+DFCDMS + P E + +VN MLP +Y P L+ N+ E RA SI++QLLG DM DYDQ L K P G+++G VF WHQD AYWP T D RT + LA++ + ENGC++ VPG+H EK LR H PL RD Sbjct: 3 DDGAGRRKGDRYELMREEIECYKTMGYVHLKGVLSEDELHNLEEEYMSFLRHEVAVEGRDFCDMSADYSKPLEDYSIVNIMLPSKYNPWLK-GNIYEKRAASISEQLLGPDMVFDYDQLLAKPP---GKSDG-VFHWHQDLAYWP-VTDDTRTASFWLAIDNSRVENGCIQFVPGTHLEKNLRYHGPLHGDRD 189
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|168016685|ref|XP_001760879.1| (predicted protein [Physcomitrella patens] >gi|162687888|gb|EDQ74268.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 180.259 bits (456), Expect = 4.863e-53 Identity = 91/189 (48.15%), Postives = 121/189 (64.02%), Query Frame = 0 Query: 18 ARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRD 206 +RRQG Y ++ E+ F +GY+ L GVL+E+E LE+ F AF+ ++ V G+DFCDMS + P E++ ++N MLP +Y P L+ N+ E RA SIA+QLLG DM LDYDQ L K P++ A F WHQD AYWP T D RT + LA++ + ENGC++ VPGSH E LR H PL RD Sbjct: 6 SRRQGDRYVVSEEEIGKFKNDGYVHLKGVLSEDEVCNLEKEFMAFVRREIHVEGRDFCDMSGDYSKPMESFSIINIMLPSKYNPRLK-GNIYEKRAASIAEQLLGSDMVLDYDQLLAKPPNKP----DAEFKWHQDLAYWP-VTKDTRTASFWLAIDNSRVENGCVQFVPGSHLESSLRYHGPLHGDRD 188
BLAST of EWM21695.1 vs. NCBI_GenBank
Match: gi|971516729|dbj|GAQ81477.1| (phytanoyl-CoA hydroxylase [Klebsormidium nitens]) HSP 1 Score: 179.104 bits (453), Expect = 1.344e-52 Identity = 90/189 (47.62%), Postives = 123/189 (65.08%), Query Frame = 0 Query: 18 ARRQGKTYKITTEDKDAFLTNGYIRLPGVLTEEECAKLEQVFDAFMEGKVQVPGKDFCDMSQRFGVPFEAWRLVNAMLPREYYPSLQEDNVLEARAHSIAQQLLGDDMALDYDQFLMKRPSRDGEANGAVFAWHQDQAYWPQQTPDFRTVTVSLALNEASRENGCLRVVPGSHREKKLRAHRPLLAGRD 206 +R G Y ED+ F +GY+ L GVL+ EE A +E+ + F++ ++ V G+DFCDMS + P + +VN MLPR+Y+P+L+ DNV E +A SIA QL G DM LDYDQ L K P G+A+G +F WHQD AYWP TPD T + LA++++ ENGC+R VPG+H E++LR H P RD Sbjct: 2 GKRIGGDYVCDDEDRGKFEADGYVHLSGVLSPEEIADIEKEYMKFIDRQILVEGRDFCDMSGDYSKPLSEFSIVNIMLPRKYHPTLK-DNVYEKKAASIAAQLCGPDMVLDYDQLLAKPP---GKADG-IFGWHQDLAYWP-ITPDTTTASFWLAIDDSRTENGCIRFVPGTHLERELRKHAPPFGDRD 184 The following BLAST results are available for this feature:
BLAST of EWM21695.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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