EWM21699.1, cds8973 (CDS) Nannochloropsis gaditana

Overview
NameEWM21699.1
Unique Namecds8973
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:81938..82029 +
Alignment locationKK037251.1:82089..82236 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21699.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101527g1.6831.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:81938..82029 +
KK037251.1supercontigKK037251.1:82089..82236 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21699.1 vs. NCBI_GenBank
Match: gi|585101996|gb|EWM21699.1| (hypothetical protein Naga_101527g1 [Nannochloropsis gaditana])

HSP 1 Score: 161.77 bits (408), Expect = 1.824e-50
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 
Query:    1 MTPSSPSSSKAARGRTKGAKGPRAEFKFKMRGSASYLNACIFQDLEICRRRCCGAARIGTPGAYGARERMLHVRNLTNS 79
            MTPSSPSSSKAARGRTKGAKGPRAEFKFKMRGSASYLNACIFQDLEICRRRCCGAARIGTPGAYGARERMLHVRNLTNS
Sbjct:    1 MTPSSPSSSKAARGRTKGAKGPRAEFKFKMRGSASYLNACIFQDLEICRRRCCGAARIGTPGAYGARERMLHVRNLTNS 79
The following BLAST results are available for this feature:
BLAST of EWM21699.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101996|gb|EWM21699.1|1.824e-50100.00hypothetical protein Naga_101527g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9003rna9003Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications