EWM21704.1, cds8969 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|585102011|gb|EWM21704.1| (sodium bile acid cotransporter 7, partial [Nannochloropsis gaditana]) HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MVLRSFSLSLVLLLPLLFHVRHCPHATTVASMHTPTSDASAFSGPPFLPRQRLVNIRSITKARGAHVAPAYRVVSASLSPVHASHLPNCRGGGEATGFRLRPALRRLTSSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKVGREERREGEKRGRE 297
MVLRSFSLSLVLLLPLLFHVRHCPHATTVASMHTPTSDASAFSGPPFLPRQRLVNIRSITKARGAHVAPAYRVVSASLSPVHASHLPNCRGGGEATGFRLRPALRRLTSSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKVGREERREGEKRGRE
Sbjct: 1 MVLRSFSLSLVLLLPLLFHVRHCPHATTVASMHTPTSDASAFSGPPFLPRQRLVNIRSITKARGAHVAPAYRVVSASLSPVHASHLPNCRGGGEATGFRLRPALRRLTSSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKVGREERREGEKRGRE 297
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|223993025|ref|XP_002286196.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977511|gb|EED95837.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 130.183 bits (326), Expect = 3.444e-31 Identity = 85/226 (37.61%), Postives = 128/226 (56.64%), Query Frame = 0
Query: 61 KARGAHVAPAYRVVSASLSPVHASHLPNCRGGGEATGFRLRPALRRLTSSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLL---IFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
A GA PA L+ A L RGG R ++ ++ + +F + GMV+A+ G+ G + PE + GV+VIFLLSG+SL+L+ELT AA + KLN IQ GA PL GLA + + + + L GLLI++CLPTT+NMCI+L+ A+G ++A A+ N V+SN G+F+ PA + G ++I +P++ +++KLV KV
Sbjct: 44 NASGARWKPATLFAVRDLTEGAAVSL---RGGD-----RSYKSIVERANAFVSNNFFLIGMVVAVAGEAVRGVDGKNGSIVRPELFIGKYGVTVIFLLSGISLKLEELTKAASNVKLNGLIQTMTFGAFPLAGLAITTTIERFLPSLLPKSLLDGLLIMTCLPTTINMCILLTSASGGNVATALCNTVISNMAGIFITPALLLQFFG-KSIELPFLDLVRKLVNKV 260
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|1129173809|gb|OLP83069.1| (Sodium/bile acid cotransporter 7 [Symbiodinium microadriaticum]) HSP 1 Score: 123.25 bits (308), Expect = 1.342e-27 Identity = 82/199 (41.21%), Postives = 119/199 (59.80%), Query Frame = 0
Query: 89 CRGGGEATGFRLRPALRRLTSSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFA----GVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
CR G ++ + LR L S + FLV GM++A++LAR P + G L + T + V+VIFLLSG SL+L E+ AA DF+LN Q ++G PLL PL+ A + +L GL+I +CLPTTVNMC++L+ +AGA+ A+A+ NA+L N LGV V PA + +GA+T ++ ++KL KV
Sbjct: 1909 CRSGSPSSDTKTT-WLRSLRSKLNANFFLV-GMLVAVILARLAPSLAKSHGLLHVD-TFSDYAVAVIFLLSGFSLKLSEMQKAALDFRLNLLTQTLSMGLIPLLAY---PLVQLAHRGAWLHGQLLDGLMITACLPTTVNMCVLLAKSAGANTAVALTNAILGNLLGVCVTPALLLITLGART-SIQLGPAVQKLGIKV 2100
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|397638038|gb|EJK72906.1| (hypothetical protein THAOC_05515 [Thalassiosira oceanica]) HSP 1 Score: 119.783 bits (299), Expect = 3.202e-27 Identity = 71/177 (40.11%), Postives = 97/177 (54.80%), Query Frame = 0
Query: 114 KHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLA-------FQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
K+F + GM A+ +AR P G+ G L PE GVS IF LSGLSL EL +A ++ KLNA IQ P +G F P L+ L GL+I+SCLPTT+NMCI+L+ +G S+ A+ N VLSN G+ + PA + G I +P++ ++ KL KV
Sbjct: 121 KNFFLLGMATAVSMARLAPSLGKNGSILRPEIFFGQYGVSAIFALSGLSLAFGELQNAFENIKLNAIIQFVTFAVWPAIGFTTTRIIETFMPQLL----PKSLLEGLVILSCLPTTINMCILLTSTSGGSVPTALCNVVLSNMSGILLTPALLMKLFGTSAIELPFLDLVVKLCKKV 293
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|255072861|ref|XP_002500105.1| (bile Acid:Na+ symporter family [Micromonas commoda] >gi|226515367|gb|ACO61363.1| bile Acid:Na+ symporter family [Micromonas commoda]) HSP 1 Score: 119.013 bits (297), Expect = 5.415e-27 Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0
Query: 111 IIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAF--QPLLIFAGV-DARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINV--PYVAVIK 277
++ +FLV GM+ + LA P G GGP+ PE+TVN V + V+FL+SGL+L L EL A + + NA IQAF G P A+ P L AGV RL GL++++CLPTT+ + L+ AA ++A+++F+AV SN G+FV PA IF +GA +V PY AV K
Sbjct: 109 LVANYFLV-GMLSGVALAYLAPGVGATGGPVRPEFTVNQVMIRVMFLISGLNLPLTELKKAVTNVRANALIQAFIFGF-PAAATAYVLGPALKAAGVLTPRLVDGLVVLACLPTTIGSGVALTNAAEGNVAVSLFHAVFSNLAGIFVTPALIFMYLGADCASVGSPYAAVTK 278
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|957832884|ref|XP_014666475.1| (PREDICTED: sodium/bile acid cotransporter 7-B-like isoform X1 [Priapulus caudatus]) HSP 1 Score: 116.316 bits (290), Expect = 1.262e-26 Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 0
Query: 112 IRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
+R ++ + G++I IV A++NP G+ GG L PE TV V VSVIF SGLSL+ +EL A + KL+ +Q F L P A L + ++ L GLL+V C+P V+ ++L+ A G S A A+FN+ +FLG+FV P I VG T VP VA+ L V
Sbjct: 7 LRANWFLLGIIIVIVSAKFNPEIGKKGGILKPEVTVKYVAVSVIFFNSGLSLKTEELMKALFNGKLHIFVQCFTLMFIPCFMQAIVAALQLSSINNWLLKGLLVVGCMPPPVSSAVILTKAVGGSEASAIFNSAFGSFLGIFVTPLLILHVVGVST-EVPVVAIFSTLAMTV 177
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|260812405|ref|XP_002600911.1| (hypothetical protein BRAFLDRAFT_214910 [Branchiostoma floridae] >gi|229286201|gb|EEN56923.1| hypothetical protein BRAFLDRAFT_214910 [Branchiostoma floridae]) HSP 1 Score: 114.775 bits (286), Expect = 5.207e-26 Identity = 66/172 (38.37%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 112 IRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
I+K + + G+V I +A+ P FG GGPL PE+TV VS IF SGLSL+ ++LTSA KL+ IQ F L P L L ++ ++ L GL++V C+P V+ ++L+ A G + A A+FN+ L +FLG+FV P + +G+ + VPY + +L V
Sbjct: 7 IKKEWFLLGIVFVISMAKVEPSFGIKGGPLKPEYTVKYFAVSFIFFNSGLSLKTEDLTSALFQVKLHGFIQTFTLVFIPCLIRVLIKGLQYSPINPWLLKGLMVVGCMPPPVSSAVILTKAVGGNEAAAIFNSALGSFLGIFVTPVLLLLFLGSPS-AVPYSTIFGQLTMTV 177
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|156398825|ref|XP_001638388.1| (predicted protein [Nematostella vectensis] >gi|156225508|gb|EDO46325.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 114.39 bits (285), Expect = 6.448e-26 Identity = 63/168 (37.50%), Postives = 99/168 (58.93%), Query Frame = 0
Query: 112 IRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKL 279
I+K++ + G+V+ I LA+ P G GG L PE+TV + VSVIF SG+SL+ ++L SA KL+ +Q+F + P+L A L ++A L GLL+VSC+P V+ ++L+ A G + A A+FN+ +FLG+FV P + +G + +VP + L
Sbjct: 5 IKKNWFLIGIVVVISLAKIAPFIGEKGGILKPEYTVKYIAVSVIFFNSGISLRTEDLKSALTHVKLHVFVQSFTMAFVPMLMTAIVQFLSHTSLNAWLLKGLLVVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIFVTPLLLLNLIGTSS-SVPVTKIFATL 171
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|1072236187|gb|OEU20915.1| (hypothetical protein FRACYDRAFT_180844 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.161 bits (287), Expect = 1.109e-25 Identity = 75/188 (39.89%), Postives = 113/188 (60.11%), Query Frame = 0
Query: 103 ALRRLTSSIIR---KHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPL-LGLAFQPLL---IFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKLVYKV 283
+L + S +++ K++ + GM A++LA+ P G GG L PE + GV++IFLLSGLSLQ ++LT A + KLN +Q G P +GL + +L I + LA GLLI++ LPTTVNMCI+L+ AG + A A+ NAV+SN G+ + P + GA +I++P+ ++ KL KV
Sbjct: 82 SLSQRVSKVVKYADKNYFLIGMFAAVILAKIVPSLGINGGILRPELFIGNYGVALIFLLSGLSLQTKDLTQAISNVKLNGLVQLLIFGFWPFCIGLPLRYVLTRIIPNLIPPALADGLLIMTTLPTTVNMCIMLTSTAGGNTASAICNAVISNLGGIVLTPLLLLKFFGA-SIHLPFGKMVLKLCQKV 268
BLAST of EWM21704.1 vs. NCBI_GenBank
Match: gi|196004961|ref|XP_002112347.1| (hypothetical protein TRIADDRAFT_25902 [Trichoplax adhaerens] >gi|190584388|gb|EDV24457.1| hypothetical protein TRIADDRAFT_25902 [Trichoplax adhaerens]) HSP 1 Score: 112.079 bits (279), Expect = 4.470e-25 Identity = 62/171 (36.26%), Postives = 103/171 (60.23%), Query Frame = 0
Query: 109 SSIIRKHFLVTGMVIAIVLARYNPHFGRIGGPLAPEWTVNTVGVSVIFLLSGLSLQLQELTSAAKDFKLNAAIQAFNLGAGPLLGLAFQPLLIFAGVDARLATGLLIVSCLPTTVNMCIVLSGAAGASLALAVFNAVLSNFLGVFVAPATIFACVGAQTINVPYVAVIKKL 279
+S +RK + + G+V++I+LA+ P G+ GG L PE T+ VS+IF SG+SL+ +EL + +++L+A IQ F P+ +L +D L GL++VSC+P V+ ++L+ A+G + A A+FN+ +FLGV V P + A +G+ VP+++V KL
Sbjct: 6 ASKLRKEWFLLGIVLSILLAKLQPTIGKTGGLLKPEITIKYFAVSIIFFNSGISLRSEELLKSFTNYRLHALIQGFTFIVVPIFVNILVAMLKHLAIDEWLLKGLIVVSCMPPPVSSAVILTKASGGNEAGAIFNSAFGSFLGVIVTPLLLLATLGSAA-TVPFLSVFTKL 175 The following BLAST results are available for this feature:
BLAST of EWM21704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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