EWM21716.1, cds8961 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|585102033|gb|EWM21716.1| (chalcone isomerase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1239.94 bits (3207), Expect = 0.000e+0 Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 0
Query: 1 MANPEVWTRSGSGGGLRGHSDASPDWAPGARVPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQHCDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQLQQSLEPPHSHRGRGRAPPARVTGGSDSGVLSATGERWGRRRAESDRAAPASVLLTKGNIFKCEKTLFKTENLAEYDFEENLLRTHEADTCLELFVLCGVGKDTQVVRTPGSKPEQVYITIGKRNIMARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN 599
MANPEVWTRSGSGGGLRGHSDASPDWAPGARVPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQHCDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQLQQSLEPPHSHRGRGRAPPARVTGGSDSGVLSATGERWGRRRAESDRAAPASVLLTKGNIFKCEKTLFKTENLAEYDFEENLLRTHEADTCLELFVLCGVGKDTQVVRTPGSKPEQVYITIGKRNIMARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN
Sbjct: 1 MANPEVWTRSGSGGGLRGHSDASPDWAPGARVPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQHCDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQLQQSLEPPHSHRGRGRAPPARVTGGSDSGVLSATGERWGRRRAESDRAAPASVLLTKGNIFKCEKTLFKTENLAEYDFEENLLRTHEADTCLELFVLCGVGKDTQVVRTPGSKPEQVYITIGKRNIMARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN 599
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|553184212|ref|XP_005854050.1| (hypothetical protein NGA_0110802 [Nannochloropsis gaditana CCMP526] >gi|553190573|ref|XP_005855218.1| hypothetical protein NGA_0110801 [Nannochloropsis gaditana CCMP526] >gi|422293840|gb|EKU21140.1| hypothetical protein NGA_0110801 [Nannochloropsis gaditana CCMP526] >gi|422295010|gb|EKU22309.1| hypothetical protein NGA_0110802 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 262/267 (98.13%), Postives = 263/267 (98.50%), Query Frame = 0
Query: 1 MANPEVWTRSGSGGGLRGHSDASPDWAPGARVPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQHCDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQLQQSLEPPHSHRGRGRAPPARVTGGSDSG 267
MANPEVWTRSGSGGGLRGHSDASPDWAPGA VPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQH DQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQ QQSLEPPHSHRGRGRAPPA VTGGS+SG
Sbjct: 1 MANPEVWTRSGSGGGLRGHSDASPDWAPGAPVPFQERIRIPRAWQPGEAKPENDSDNEEDRPAAGTSKGKSGDRRGGYKCGRCGQPKKGHVCTNKPRLRAAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESYGLTFRWAPSAASLYAAQQQQQEEQQQHSDQRQPQMASQQLQQQQQQPLYERAHLLATPSTNFSQQQQTEHLLPMQAGGACAMECLSSSDHSHQVQQVQDHGPVQPQQSLEPPHSHRGRGRAPPAGVTGGSNSG 267
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|553184206|ref|XP_005854048.1| (chalcone isomerase-like protein [Nannochloropsis gaditana CCMP526] >gi|553190564|ref|XP_005855216.1| chalcone isomerase-like protein [Nannochloropsis gaditana CCMP526] >gi|422293838|gb|EKU21138.1| chalcone isomerase-like protein [Nannochloropsis gaditana CCMP526] >gi|422295008|gb|EKU22307.1| chalcone isomerase-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 478.019 bits (1229), Expect = 9.659e-165 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 365 MARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN 599
MARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN
Sbjct: 1 MARSCIFRLALFCAILLCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHIN 235
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|873220908|emb|CEM34595.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 148.673 bits (374), Expect = 8.541e-38 Identity = 81/188 (43.09%), Postives = 120/188 (63.83%), Query Frame = 0
Query: 404 DKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGR-LKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGF 590
DKVTG+ FP P + +TLLG GPRRKNL + +VNVY+VGLY+E + L +F+G+S E+L + ++Y TL+ G + + + L FARTV A K+ +AL+AV GV+ EV+++F L +G+S+K+ ET+ + WT D RL + +R +P T +L + F LYLG+ P+S EAK F
Sbjct: 11 DKVTGIEFPCEATFPGTPK---MTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLL--GKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAF 193
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|298712887|emb|CBJ33403.1| (Similar to Chalcone Isomerase [Ectocarpus siliculosus]) HSP 1 Score: 135.191 bits (339), Expect = 1.173e-32 Identity = 81/219 (36.99%), Postives = 118/219 (53.88%), Query Frame = 0
Query: 381 LCLSDGYGKTSNDTCEVKGKEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGR-LKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHI 598
+CL+ Y K + +V D TGLV P + G L LGVG R K++ V VNVY VGLY+E + LK++ G+ E L+K+ Y L G ++ L+L+FAR+V A K+V+A AV GV ++V+ F + +G S+ +E++TL W DRL + VRDK + + L +FNL+LG P+SP AK FA P +
Sbjct: 12 VCLTTSYAKAAGLAKTPLSPDVRDPATGLVLPRTKQFASSKTG--LVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGD-FSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFL 227
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|1026773431|gb|OAE32652.1| (hypothetical protein AXG93_632s1010 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 81.2629 bits (199), Expect = 3.862e-13 Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 401 EVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPA----GKIVEALAAVDGVKKEVMADFKKSLLAAIGS-----SLKEKETLTLAWTPDDRLSLFVR------DKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAV 593
EVV+ VT + FP I P G +L L G G R K + ++V VYAVG Y++ + L A++ K + L K+ + L+ + ++L ++ AR + G + EALA +K + L + G LKEK ++L WT L + + P + SL+L ++++YLG+ P+SP AK ++
Sbjct: 89 EVVEPVTNIKFPKSTIAP--GASTDLVLAGAGVREKKIAFLKVKVYAVGFYVDPKGISSLDAWKSKGTSELEKDESFSKVLI--DIPVEKSLRIVLARDIEGAQFWGALDEALAP--RLKAAGAGAAGEQALNSFGDVFKNRPLKEKTVISLTWTQPSTLHISITPEGRSPSAPDASIDSLDLVSSLYDVYLGKDPVSPSAKASVVSL 290
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|1052467702|gb|AOC83893.1| (chalcone isomerase 3a, partial [Plagiochasma appendiculatum]) HSP 1 Score: 78.5666 bits (192), Expect = 2.087e-12 Identity = 64/206 (31.07%), Postives = 104/206 (50.49%), Query Frame = 0
Query: 401 EVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPA----GKIVEALA---------AVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDK---PVKTFPSLE---LARGIFNLYLGEKPISPEAK 587
EV++ VTG+ F + I P G +EL L G G R K + ++V VYAVGLY+E S+ L+A++ K++ L K+ + L+ G+ + ++L ++ AR + G + EALA A D K G LKE+ + L WT L + + ++ P + S+E L +F++YLG++P+SP K
Sbjct: 88 EVLEPVTGIKFLRNTIAP--GASKELVLAGAGVREKKIAFLKVKVYAVGLYVEPSVASSLEAWKAKTASELEKDEGFCKALI--GAPIEKSLRIVLARDIEGAQFWGALDEALAPRLRAAGAGAAGEKALAAFGDVFK------GRPLKERTVIFLTWTQPSTLDISISEEGASPSASDASIESEALLFCLFDVYLGKEPVSPTTK 283
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|1026765833|gb|OAE26463.1| (hypothetical protein AXG93_815s1250 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 75.8702 bits (185), Expect = 2.200e-11 Identity = 62/213 (29.11%), Postives = 100/213 (46.95%), Query Frame = 0
Query: 400 KEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFV-VEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSS--------------LKEKETLTLAWTPDDRLSLFVR------DKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFA 591
KEVV+ VTG+ F P G +EL L G G R K +F V+V VYAVGLY++ S + L+A++ K ++ + K+ + TL+ + +++ ++ AR V + AL + +A K+L A LK+K + L WT L + + P + S L ++++YLG+ P+SP AK A
Sbjct: 93 KEVVEPVTGIKFAKSTNAP--GASKELVLAGAGVRIKKVFAAVKVKVYAVGLYVDPSAVSSLQAWKSKGTKEIEKDESFSKTLIDL--PVEKSIRIVLARDVEGAQFWGALG-------DALAPRLKALGAGAAGEQALNTFGDVFKNRPLKDKTVVFLTWTQPSTLHVSIAPEGGSPSAPDASIESAALLSSLYDVYLGKDPVSPSAKASIA 294
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|1210516854|dbj|GAX24343.1| (hypothetical protein FisN_4Lh464 [Fistulifera solaris]) HSP 1 Score: 76.6406 bits (187), Expect = 2.831e-11 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
Query: 50 KPENDSDNEEDRPAAGTSKGKSG-DR-RGGYKCGRCGQPKKGHVCTNKPRLR----AAFVETTEVEIQAERDAEMVLRRLDTKLQGYPESY 134
+P S EED A +S G+SG D+ RG YKCGRCG PKKGHVC + +++ ET +Q ERD M LRRL+ ++QG+PESY
Sbjct: 215 QPSQPSFYEED--GAESSAGESGKDKGRGSYKCGRCGVPKKGHVCPYQAKVKRRPDEPPPETRNAAVQVERDEFMTLRRLNIRIQGFPESY 303
BLAST of EWM21716.1 vs. NCBI_GenBank
Match: gi|1052467704|gb|AOC83894.1| (chalcone isomerase 3a, partial [Conocephalum conicum]) HSP 1 Score: 74.7146 bits (182), Expect = 3.981e-11 Identity = 62/205 (30.24%), Postives = 100/205 (48.78%), Query Frame = 0
Query: 400 KEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGRLKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPA----GKIVEAL-----AAVDGVKKEVMADFKKSLLAAIGSSLK-----EKETLTLAWTPDDRLSLFVR------DKPVKTFPSLELARGIFNLYLGEKPISP 584
EV++ VTG+ F I P G +EL L+G G R K + ++V VYAVGLY+E S+ L+A++ K++ L K+ ++ ++ S + ++L ++ AR + G + EAL AA GV E L A G K ++ + L WT L + V P + S L ++++YLG+ P+SP
Sbjct: 88 NEVLEPVTGIKFLKTTIAP--GASKELVLVGAGVRDKKIAFLKVKVYAVGLYVEPSVASSLEAWKAKAASELEKDESFFKAIID--SPVEKSLRIVLARDIEGAQFWGALDEALAPRLKAAGAGVAGE-------KALVAFGDVFKNRPLTDRTVIFLTWTQPSTLHISVSTDGASPSPPDASIESGALLSCLYDVYLGKDPVSP 281 The following BLAST results are available for this feature:
BLAST of EWM21716.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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