EWM21721.1, cds8952 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|585102040|gb|EWM21721.1| (ubiquitin carboxyl-terminal hydrolase 22 [Nannochloropsis gaditana]) HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0 Query: 1 MCPGCQHRSPSSTADDDGCKDRCDRAARSPVVRSKESSVVDWVMKEREDMLYCLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQPSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKAATLVWEGDTTGGGKEGGQVGARNLKEPCAVHWPDRGERSNGERPGPTSSSFVTAPCLACELQELFLLVRKKRLAS 282 MCPGCQHRSPSSTADDDGCKDRCDRAARSPVVRSKESSVVDWVMKEREDMLYCLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQPSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKAATLVWEGDTTGGGKEGGQVGARNLKEPCAVHWPDRGERSNGERPGPTSSSFVTAPCLACELQELFLLVRKKRLAS Sbjct: 1 MCPGCQHRSPSSTADDDGCKDRCDRAARSPVVRSKESSVVDWVMKEREDMLYCLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQPSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKAATLVWEGDTTGGGKEGGQVGARNLKEPCAVHWPDRGERSNGERPGPTSSSFVTAPCLACELQELFLLVRKKRLAS 282
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|766941181|ref|XP_011503216.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ceratosolen solmsi marchali]) HSP 1 Score: 98.9821 bits (245), Expect = 7.649e-20 Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 0 Query: 45 KEREDMLY-CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLI-RLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQP----SLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200 K +D L+ CL C + C HI++H HFL V G I CF CGD VYD E ++ + W++ S S R + PSL+ LL + +V ++T GLRG NLGSTCFM+CI+QAL+H P+L+D+FL RH CP+ Sbjct: 50 KSYKDRLHSCLHCIFFGCYVKGHIQEHAKTKKHFLAVDL----------CYGNILCFQCGDYVYDRELLVVAKAQWSETAKSLSLGEFYR--TWEPSLYEVELLKKNPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRDYFLADRHH---CPQ 196
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|929767739|ref|XP_014158850.1| (hypothetical protein, variant [Sphaeroforma arctica JP610] >gi|906956384|gb|KNC84947.1| hypothetical protein, variant [Sphaeroforma arctica JP610]) HSP 1 Score: 98.2117 bits (243), Expect = 1.632e-19 Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = 0 Query: 53 CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPS-LRPSLFT-W-------PLLAQ----PSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKAATLVWE 213 CL C CRR +H+++H+ T H L + ++C +CG+ VYDV+ D R++ + R + L R PS R + F+ W +L Q P L +++ GLRG NLG+TCFMSC+LQA +HNP L++FFL H C + LV E Sbjct: 65 CLTCASYHCRRKEHLKQHYKETKHELAIDV----------ANNAVYCLVCGEYVYDVDID--RVIINEQRQAALSDLKRSDPSNFRRTAFSEWVPDGTEKAILNQHSKRPRLTEYSSLGLRGLNNLGNTCFMSCVLQAFVHNPPLRNFFLSGSHRKDRCMRRLSGDSKVCLVCE 226
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|929767737|ref|XP_014158849.1| (hypothetical protein SARC_02839 [Sphaeroforma arctica JP610] >gi|906956385|gb|KNC84948.1| hypothetical protein SARC_02839 [Sphaeroforma arctica JP610]) HSP 1 Score: 98.2117 bits (243), Expect = 1.669e-19 Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = 0 Query: 53 CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPS-LRPSLFT-W-------PLLAQ----PSLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPKAQGSRKAATLVWE 213 CL C CRR +H+++H+ T H L + ++C +CG+ VYDV+ D R++ + R + L R PS R + F+ W +L Q P L +++ GLRG NLG+TCFMSC+LQA +HNP L++FFL H C + LV E Sbjct: 65 CLTCASYHCRRKEHLKQHYKETKHELAIDV----------ANNAVYCLVCGEYVYDVDID--RVIINEQRQAALSDLKRSDPSNFRRTAFSEWVPDGTEKAILNQHSKRPRLTEYSSLGLRGLNNLGNTCFMSCVLQAFVHNPPLRNFFLSGSHRKDRCMRRLSGDSKVCLVCE 226
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|1078806334|ref|XP_018495456.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Galendromus occidentalis]) HSP 1 Score: 95.9005 bits (237), Expect = 9.517e-19 Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 53 CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQ--ARSSDSRSLLRRPPSLRPSLFTWPLLA-QPSLVR---HATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRH 193 CLQC Y CR Y H ++H +NH + ++ G ++C+LC + V+D EFD+I + Q A D +R P P LL+ QP +R GLRG NLG+TCFM+CI+Q L H P L+++FL ++H Sbjct: 63 CLQCCYVGCRLYNHSQEHHEESNHHVAISL----------SHGVLYCYLCAEYVHDYEFDIIAIKARQRLADFLDLNEFVRSVPLWNPKYGELELLSLQPKRMRVDSKTPIGLRGLYNLGNTCFMNCIIQCLTHTPFLREYFLSQQH 199
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|817066217|ref|XP_012254936.1| (ubiquitin carboxyl-terminal hydrolase 22 [Athalia rosae]) HSP 1 Score: 95.5153 bits (236), Expect = 1.433e-18 Identity = 63/162 (38.89%), Postives = 85/162 (52.47%), Query Frame = 0 Query: 45 KEREDMLY-CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLI-RLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQP----SLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200 K +D L+ CL C + C HI++H HFL V G I CF CGD VYD E + + W+Q S+ S SL + P+ LL + +V ++T GLRG NLGSTCFM+CI+QAL+H P+L+D+FL RH CP+ Sbjct: 50 KTYKDRLHSCLHCIFFGCYLRGHIQEHAKTKKHFLAVDL----------SYGNILCFQCGDYVYDRELTAVAKSQWSQ--SARSLSLGEFYRAWEPTQVEADLLRKNPRRRRIVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRDYFLADRHH---CPQ 196
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|954545112|ref|XP_014615006.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Polistes canadensis]) HSP 1 Score: 95.5153 bits (236), Expect = 1.825e-18 Identity = 59/153 (38.56%), Postives = 78/153 (50.98%), Query Frame = 0 Query: 53 CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEF-DLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQP----SLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200 CL C + C HI++H HFL V G I CF CGD VYD E + + W+Q S S R + P+ LL + +V ++T GLRG NLGSTCFM+CI+QAL+H P+L+D+FL RH CP+ Sbjct: 209 CLHCIFFGCYVKGHIQEHAKTKKHFLAVDL----------SYGNILCFQCGDYVYDRELLSVAKAQWSQLAKSLSFGEFYR--TWEPTQIEAELLRKHPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRDYFLADRHH---CPQ 346
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|939259347|ref|XP_014249494.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cimex lectularius]) HSP 1 Score: 95.1301 bits (235), Expect = 1.860e-18 Identity = 53/148 (35.81%), Postives = 76/148 (51.35%), Query Frame = 0 Query: 50 MLYCLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQ-PSLVR---HATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRH 193 +L C+ C Y C +H HF T H L V G +FCF CGD VYD + ++I RS S + + P RPS F LL + P ++ H+ G+RG N GS+C+++CI+QAL H P+L+D+F +H Sbjct: 56 LLACMHCVYMGCYN-KHATLHFTKTAHALTVEL----------SNGNVFCFSCGDYVYDRDIEIIAT--KHKRSMGINSAIPKSPPWRPSNFENKLLQEHPKRIKLEAHSQIGIRGMINFGSSCYLNCIMQALFHTPILRDYFFTEKH 190
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|998512091|ref|XP_015516605.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 isoform X1 [Neodiprion lecontei]) HSP 1 Score: 94.7449 bits (234), Expect = 2.123e-18 Identity = 63/162 (38.89%), Postives = 85/162 (52.47%), Query Frame = 0 Query: 45 KEREDMLY-CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEFDLI-RLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQP----SLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200 K +D L+ CL C + C HI++H HFL V G I CF CGD VYD E + + W+Q S+ S SL + P+ LL + +V ++T GLRG NLGSTCFM+CI+QAL+H P+L+D+FL RH CP+ Sbjct: 50 KTYKDRLHSCLHCIFFGCYSKGHIQEHAKTKKHFLAVDL----------CYGNILCFQCGDYVYDRELTAVAKSQWSQ--SARSLSLGEFYRAWEPTQVEADLLRKNPRRRRIVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRDYFLADRHH---CPQ 196
BLAST of EWM21721.1 vs. NCBI_GenBank
Match: gi|156549078|ref|XP_001607506.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Nasonia vitripennis]) HSP 1 Score: 95.1301 bits (235), Expect = 2.163e-18 Identity = 62/162 (38.27%), Postives = 84/162 (51.85%), Query Frame = 0 Query: 45 KEREDMLY-CLQCGYRACRRYQHIEKHFLVTNHFLGVAPYAPGGMEGGDGGGGIFCFLCGDNVYDVEF-DLIRLLWAQARSSDSRSLLRRPPSLRPSLFTWPLLAQP----SLVRHATYGLRGFCNLGSTCFMSCILQALLHNPVLKDFFLRRRHSLATCPK 200 K +D L+ CL C + C HI++H HFL V G I CF CGD VYD E + + W++ S S R + PS+ LL + +V ++T GLRG NLGSTCFM+CI+QAL+H P+L+D+FL RH CP+ Sbjct: 50 KTYKDRLHSCLHCIFFGCYVKGHIQEHAKTKKHFLAVDL----------CYGNILCFQCGDYVYDRELLSVAKAQWSETAKSLSLGEFYR--TWEPSVNEVELLRKNPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRDYFLADRHH---CPQ 196 The following BLAST results are available for this feature:
BLAST of EWM21721.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|