EWM21781.1, cds8898 (CDS) Nannochloropsis gaditana

Overview
NameEWM21781.1
Unique Namecds8898
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:504782..504810 +
Alignment locationKK037250.1:506012..506169 +
Alignment locationKK037250.1:506289..506710 +
Alignment locationKK037250.1:506898..507079 +
Alignment locationKK037250.1:507184..507316 +
Alignment locationKK037250.1:507466..507619 +
Alignment locationKK037250.1:507763..507996 +
Alignment locationKK037250.1:508038..508171 +
Alignment locationKK037250.1:508224..508307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21781.1
Productcysteine dioxygenase
Orig transcript idgnl|cribi|Naga_100188g9.2464.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:504782..504810 +
KK037250.1supercontigKK037250.1:506012..506169 +
KK037250.1supercontigKK037250.1:506289..506710 +
KK037250.1supercontigKK037250.1:506898..507079 +
KK037250.1supercontigKK037250.1:507184..507316 +
KK037250.1supercontigKK037250.1:507466..507619 +
KK037250.1supercontigKK037250.1:507763..507996 +
KK037250.1supercontigKK037250.1:508038..508171 +
KK037250.1supercontigKK037250.1:508224..508307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0046439L-cysteine metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0017172cysteine dioxygenase activity
GO:0005506iron ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin
IPR010300Cys_dOase_I
IPR014710RmlC-like_jellyroll
Homology
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|585102116|gb|EWM21781.1| (cysteine dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 1053.12 bits (2722), Expect = 0.000e+0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0
Query:    1 MTRHGQSCNFGRPGAQDDTRLSESPRTLLCLKPAYTSLTTHHINMPPSIFERLINILGSSPPDSDHHRPYDQESYKVRRALSDCTIPDDLREEGAEPPAVKAGRLEFSRASDVLDNTSKDSRNPLPKGGDGGQKSGRRQHISSYASKMAPLEDEGAREKDMKREASSSSCSSTGPCSSTPKEFFFSDQDGKILRGDSRASSLDVAIPPLNGHDHPHHVRVISWMKDLGEGALSLEEFSMILPTVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVKEGGREMGKEGPTITDLRAVEEQRKDKSRREGGCIALCHRPPPPRRKEYVGHAIKYVEDIEIIGKVGKEILTSTSTHSECLKIRRWLDQAGA 509
            MTRHGQSCNFGRPGAQDDTRLSESPRTLLCLKPAYTSLTTHHINMPPSIFERLINILGSSPPDSDHHRPYDQESYKVRRALSDCTIPDDLREEGAEPPAVKAGRLEFSRASDVLDNTSKDSRNPLPKGGDGGQKSGRRQHISSYASKMAPLEDEGAREKDMKREASSSSCSSTGPCSSTPKEFFFSDQDGKILRGDSRASSLDVAIPPLNGHDHPHHVRVISWMKDLGEGALSLEEFSMILPTVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVKEGGREMGKEGPTITDLRAVEEQRKDKSRREGGCIALCHRPPPPRRKEYVGHAIKYVEDIEIIGKVGKEILTSTSTHSECLKIRRWLDQAGA
Sbjct:    1 MTRHGQSCNFGRPGAQDDTRLSESPRTLLCLKPAYTSLTTHHINMPPSIFERLINILGSSPPDSDHHRPYDQESYKVRRALSDCTIPDDLREEGAEPPAVKAGRLEFSRASDVLDNTSKDSRNPLPKGGDGGQKSGRRQHISSYASKMAPLEDEGAREKDMKREASSSSCSSTGPCSSTPKEFFFSDQDGKILRGDSRASSLDVAIPPLNGHDHPHHVRVISWMKDLGEGALSLEEFSMILPTVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVKEGGREMGKEGPTITDLRAVEEQRKDKSRREGGCIALCHRPPPPRRKEYVGHAIKYVEDIEIIGKVGKEILTSTSTHSECLKIRRWLDQAGA 509          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|1210527640|dbj|GAX13626.1| (cysteine dioxygenase [Fistulifera solaris])

HSP 1 Score: 155.992 bits (393), Expect = 6.212e-41
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 0
Query:  234 LEEFSMILP-TVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKET--IYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRV 417
            L EF   LP  + +R    +    +P+  L  +L L + DW  Y  WD  + YTRNLVATD +T+TLLLLCWNPG+ SPIHDHPCDGCW++  QG V E   +  +   R++     + +  GEL Y+EDS+G+H+VGNP     AVTLH Y PP    ++W       S+ M      Y+ +G++V
Sbjct:   29 LNEFLRDLPFAICQRKKELSRGFKDPISELFRKLHLHQSDWIKYCHWDSSRPYTRNLVATDHETYTLLLLCWNPGQASPIHDHPCDGCWMRVLQGCVHEERFVKSVVDHRTMHCTRNELYSAGELLYMEDSMGYHRVGNPSADELAVTLHLYCPPYHQCKIWADIEQ--SEPMIGQISHYTEYGRKV 213          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|675176935|ref|XP_008897352.1| (hypothetical protein PPTG_05526 [Phytophthora parasitica INRA-310] >gi|566011055|gb|ETI33966.1| hypothetical protein F443_19449 [Phytophthora parasitica P1569] >gi|567948585|gb|ETK74329.1| hypothetical protein L915_18868 [Phytophthora parasitica] >gi|567977254|gb|ETL27759.1| hypothetical protein L916_18763 [Phytophthora parasitica] >gi|568006725|gb|ETL80976.1| hypothetical protein L917_18586 [Phytophthora parasitica] >gi|568036563|gb|ETM34169.1| hypothetical protein L914_18682 [Phytophthora parasitica] >gi|568103167|gb|ETN17838.1| hypothetical protein PPTG_05526 [Phytophthora parasitica INRA-310] >gi|570314817|gb|ETO62765.1| hypothetical protein F444_19400 [Phytophthora parasitica P1976] >gi|570938601|gb|ETP03858.1| hypothetical protein F441_19266 [Phytophthora parasitica CJ01A1] >gi|570968891|gb|ETP32010.1| hypothetical protein F442_19218 [Phytophthora parasitica P10297] >gi|970628867|gb|KUF76318.1| Cysteine dioxygenase [Phytophthora nicotianae])

HSP 1 Score: 153.68 bits (387), Expect = 4.135e-40
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 0
Query:  259 VKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVK 418
            +++LL    +  E+   +A +DP + YTRNL++TD +T+ L+LLCWNPGK SP+HDHP DGCWVK  QG V E  Y+   G+  + E     +   ++Y++DS G HKVGNP P I A+++H Y PP     VW  T  A   S++V    Y+ +G +V+
Sbjct:   53 IQQLLEDFPVNMEELQRFAHFDPSRNYTRNLISTDNETYALMLLCWNPGKYSPVHDHPTDGCWVKIIQGHVNEVRYEKQNGK--LVETSNVVFTSGVTYMDDSFGLHKVGNPHPEINAISMHLYSPPYEKCSVWFDTENADKSSVSVAN-YYTEYGDKVE 209          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|673038979|ref|XP_008873450.1| (hypothetical protein H310_09211 [Aphanomyces invadans] >gi|574470880|gb|ETV97889.1| hypothetical protein H310_09211 [Aphanomyces invadans])

HSP 1 Score: 150.214 bits (378), Expect = 5.982e-39
Identity = 74/157 (47.13%), Postives = 96/157 (61.15%), Query Frame = 0
Query:  259 VKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQ 415
            +K+ L  L    ++   YA +DP + YTRNL+ATD +T+ L+LLCWN GK SPIHDHP DGCWV+  QGTV E  Y  + G SL    E +   G ++Y++DSLG HK+GNP     A+TLH Y PP    R+WL    A   S  + T  YS FG+
Sbjct:   46 IKKALASLHADLDELKRYAHFDPSRNYTRNLIATDNQTYALMLLCWNKGKYSPIHDHPSDGCWVRHIQGTVHEVRY-WNNGTSLEQTSETFVSEG-VTYMDDSLGLHKIGNPSDTTDAITLHLYAPPYDKCRLWLNPADATKSSTAMST-FYSEFGE 199          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|301119865|ref|XP_002907660.1| (cysteine dioxygenase, putative [Phytophthora infestans T30-4] >gi|262106172|gb|EEY64224.1| cysteine dioxygenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 149.058 bits (375), Expect = 1.361e-38
Identity = 70/160 (43.75%), Postives = 99/160 (61.88%), Query Frame = 0
Query:  259 VKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVK 418
            +++LL  + +  ED   +A +DP + YTRNL++TD +T+ L+LLCWNPGK SP+HDHP DGCWVK  QG V E  Y+    + LV         G ++Y++DS G HKVGNP P I A+++H Y PP     VW  T  A   S++V    Y+ +G+ V+
Sbjct:   43 LQQLLEDVSINMEDVQRFAHFDPSRNYTRNLISTDNETYALMLLCWNPGKYSPVHDHPTDGCWVKVIQGNVNEVRYEKQNDK-LVQTSNVVLTSG-VTYMDDSFGLHKVGNPHPEIRAISMHLYSPPYEKCCVWFDTENADKSSVSVAN-YYTEYGEEVE 199          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|953500611|emb|CEG38320.1| (cysteine dioxygenase [Plasmopara halstedii])

HSP 1 Score: 147.902 bits (372), Expect = 3.454e-38
Identity = 67/160 (41.88%), Postives = 97/160 (60.62%), Query Frame = 0
Query:  259 VKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVK 418
            +++LL    +   +   +A +DP + YTRNL++TD +T+ L+LLCWNPGK SP+HDHP DGCWVK  QG V E  Y+    R  + E         ++Y++DS GFHKVGNP   + A+++H Y PP    RVW  T      S++V    YS +G++V+
Sbjct:   38 LRQLLEDFPVDMNELQRFAHFDPSRNYTRNLISTDNETYALMLLCWNPGKYSPVHDHPTDGCWVKVIQGNVNEVRYEKQNNR--LVETLNVVLTSGVTYMDDSYGFHKVGNPHTKMNAISMHLYSPPYEKCRVWFDTDNVNKSSVSVAN-YYSEYGKKVE 194          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|698793530|ref|XP_009829797.1| (hypothetical protein H257_06307 [Aphanomyces astaci] >gi|574115364|gb|ETV80850.1| hypothetical protein H257_06307 [Aphanomyces astaci])

HSP 1 Score: 147.517 bits (371), Expect = 6.652e-38
Identity = 76/183 (41.53%), Postives = 101/183 (55.19%), Query Frame = 0
Query:  232 LSLEEFSMILPTVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFG 414
            L+L E   ++ +  +R     +   + +K  L    +   +   YA +DP + YTRNL+ATD  T+ L+LLCWN GK SPIHDHP DGCWV+  QGTV E  Y  + G SL    E     G ++Y++DSLG HK+GNP     A+TLH Y PP    R+W     A   S  + T  YS FG
Sbjct:   21 LTLRELVDVIESEFERQERLPLNKKDDIKNALAAFNVDSNELKRYAHFDPSRNYTRNLIATDNATYALMLLCWNKGKYSPIHDHPSDGCWVRHIQGTVHEVRY-WNNGTSLEQTSELTISEG-VTYMDDSLGLHKIGNPSDSTDAITLHLYAPPYDKCRLWFNPTDATKSSTAIAT-FYSEFG 200          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|673034342|ref|XP_008871132.1| (hypothetical protein H310_07526 [Aphanomyces invadans] >gi|673034344|ref|XP_008871133.1| hypothetical protein, variant [Aphanomyces invadans] >gi|574473103|gb|ETW00107.1| hypothetical protein H310_07526 [Aphanomyces invadans] >gi|574473104|gb|ETW00108.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 147.132 bits (370), Expect = 3.979e-37
Identity = 75/189 (39.68%), Postives = 106/189 (56.08%), Query Frame = 0
Query:  231 ALSLEEFSMILPTVLKRCNLRNMKMCEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVKE 419
            AL+L+E   I+ T     +       + +K+ L   +   +    YA +DP + YTRNL++TD  ++ L+LLCWN GK SPIHDHP DGCWV+  QGT+ E  Y  DG +  + E         +SY++DSLG HK+GNP   + A+TLH Y PP    R+W     A S S T     YS +G+R ++
Sbjct:   69 ALTLQELVAIIDTETHVRDGIPFHKKDDIKQALHDFDGSMDALERYAHFDPSRNYTRNLISTDNTSYALMLLCWNRGKYSPIHDHPSDGCWVRHIQGTLNEVRYWNDGEK--LIETSNTLITSGVSYMDDSLGLHKIGNPSTDVDAITLHLYSPPYNKCRLWFDPADA-SKSSTAVANFYSEYGERTQQ 254          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|695381588|ref|XP_009517135.1| (hypothetical protein PHYSODRAFT_476031 [Phytophthora sojae] >gi|348690046|gb|EGZ29860.1| hypothetical protein PHYSODRAFT_476031 [Phytophthora sojae])

HSP 1 Score: 143.28 bits (360), Expect = 1.365e-36
Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 0
Query:  259 VKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQRVK 418
            +++LL    +  E+   +A +DP + YTRNL++TD +T+ L+LLCWN GK SPIHDHP DGCWVK  QG V E  YQ    +  + E         ++Y++DS G HKVGNP     A+++H Y PP    RVW  T  A   S++V    Y+ +G++V+
Sbjct:   28 LQQLLEDFPVNMEELQRFAHFDPSRNYTRNLISTDNETYALMLLCWNRGKYSPIHDHPTDGCWVKVIQGHVNEVRYQKQDDK--LVETSNIVLTSGVTYMDDSFGLHKVGNPSQECDAISMHLYSPPYEKCRVWFDTEDADKSSVSVAN-YYTEYGEKVE 184          
BLAST of EWM21781.1 vs. NCBI_GenBank
Match: gi|1173949228|gb|OQR97291.1| (cysteine dioxygenase [Achlya hypogyna])

HSP 1 Score: 142.895 bits (359), Expect = 3.118e-36
Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 0
Query:  230 GALSLEEFSMILPTVLKRCNLRNMKM--CEPVKRLLGRLELRREDWSPYAFWDPDKLYTRNLVATDGKTFTLLLLCWNPGKESPIHDHPCDGCWVKCAQGTVKETIYQMDGGRSLVAEEEKYFYPGELSYIEDSLGFHKVGNPDPVIGAVTLHCYIPPPRSARVWLPTRTAVSDSMTVPTCLYSAFGQ 415
            G LSL E    +  V +     ++ +   + +K+ L       ++   +A +D  + YTRNL+ATD +T+ L+LLCWN GK SPIHDHP DGCWV+  QGTV E  Y  + G +LV         G +S++ DSLG HK+GNP   + A+TLH Y PP    R+W     A   S  V +  YS FG+
Sbjct:   16 GVLSLREVVAAIEDVFEEHGTSSIPLEKMDAIKQALEDFSGDMKELERFAHFDASRNYTRNLIATDNETYALMLLCWNKGKYSPIHDHPSDGCWVRLIQGTVNEVRYA-NTGAALVETSNAMVSEG-VSFMHDSLGLHKIGNPSADVDAITLHLYAPPYDKCRLWFDPSDATKVSTAV-SSFYSEFGE 200          
The following BLAST results are available for this feature:
BLAST of EWM21781.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102116|gb|EWM21781.1|0.000e+0100.00cysteine dioxygenase [Nannochloropsis gaditana][more]
gi|1210527640|dbj|GAX13626.1|6.212e-4142.25cysteine dioxygenase [Fistulifera solaris][more]
gi|675176935|ref|XP_008897352.1|4.135e-4042.50hypothetical protein PPTG_05526 [Phytophthora para... [more]
gi|673038979|ref|XP_008873450.1|5.982e-3947.13hypothetical protein H310_09211 [Aphanomyces invad... [more]
gi|301119865|ref|XP_002907660.1|1.361e-3843.75cysteine dioxygenase, putative [Phytophthora infes... [more]
gi|953500611|emb|CEG38320.1|3.454e-3841.88cysteine dioxygenase [Plasmopara halstedii][more]
gi|698793530|ref|XP_009829797.1|6.652e-3841.53hypothetical protein H257_06307 [Aphanomyces astac... [more]
gi|673034342|ref|XP_008871132.1|3.979e-3739.68hypothetical protein H310_07526 [Aphanomyces invad... [more]
gi|695381588|ref|XP_009517135.1|1.365e-3641.88hypothetical protein PHYSODRAFT_476031 [Phytophtho... [more]
gi|1173949228|gb|OQR97291.1|3.118e-3639.89cysteine dioxygenase [Achlya hypogyna][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8928rna8928Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications