EWM21783.1, cds8892 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|585102118|gb|EWM21783.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0 Query: 1 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRILPSTALGTNSETHGMDREPSSARPWCRTVSHLRAILLHLLAQPHSPHVCLCTLPTVGVPSSLRARAIKGVNAQIASMVRSLPPVPSPASHPQAPRPPVTLVDLSQRRVSRPEGRALDGVHFNSTGYKSMATAVLEELAPVMVRHEWAILQGFLSGKKRRDKRRPDGWLGGWLRRGGREGEKEKVG 411 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRILPSTALGTNSETHGMDREPSSARPWCRTVSHLRAILLHLLAQPHSPHVCLCTLPTVGVPSSLRARAIKGVNAQIASMVRSLPPVPSPASHPQAPRPPVTLVDLSQRRVSRPEGRALDGVHFNSTGYKSMATAVLEELAPVMVRHEWAILQGFLSGKKRRDKRRPDGWLGGWLRRGGREGEKEKVG Sbjct: 1 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRILPSTALGTNSETHGMDREPSSARPWCRTVSHLRAILLHLLAQPHSPHVCLCTLPTVGVPSSLRARAIKGVNAQIASMVRSLPPVPSPASHPQAPRPPVTLVDLSQRRVSRPEGRALDGVHFNSTGYKSMATAVLEELAPVMVRHEWAILQGFLSGKKRRDKRRPDGWLGGWLRRGGREGEKEKVG 411
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|553193089|ref|XP_005855707.1| (hypothetical protein NGA_2029600, partial [Nannochloropsis gaditana CCMP526] >gi|422293353|gb|EKU20653.1| hypothetical protein NGA_2029600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0 Identity = 257/259 (99.23%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRILPSTALGTNSETHGMDREPSSARPWCRTVSHLR 259 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGR+LPSTALGTNSET+GMDREPSSARPWCRTVSHLR Sbjct: 6 MSLRSSASATTKGQRNYRSMLRRVWQFLLDRFLVSFNGLITVWRLALHWVNSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRMLPSTALGTNSETYGMDREPSSARPWCRTVSHLR 264
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|299470764|emb|CBN79810.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.339 bits (329), Expect = 2.251e-31 Identity = 98/363 (27.00%), Postives = 152/363 (41.87%), Query Frame = 0 Query: 20 MLRRVWQFLLDRFLVSFNGLITVWRLALHWV--NSYILYYDYGGKPANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESENKGVGTSEAARPEPQGEIRGDHPESEDSSLLQPLPAIKPPRSLLDAVLSSRSGRDACVYIVMVGLQDLLRTKDAGALSALAAGGDGATQTGRILPSTALGTNSETHGMDREPSSARPWCRTVSHLRAILLHLLAQPHSPHVCLCTLPTVGVPSSLRARAIKGVNAQIASMVRSLPPVPSPASHPQAPRPPVTLVDLSQRRVSRPEGRALDGVHFNSTGYKSMATAVLEELAPVMVRHEWAILQGFLS 380 M R + L LV+ +TV W+ N +++ D+ +P DF HK VLIGDG A+G G WV +G T+G R L +E + V+ W RG S + DW+P + P+SL + S + RDA +++V +G D++ +SA+ TAL T E C TV +LR I L A+ V +C + T G + R K +N Q+A ++ + PV +V ++ R +R +GRA DG+H N+ GY++ A+AV E + P+MV EW + + L+ Sbjct: 1 MATREFWLLTSYLLVALRRALTV-----TWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSD-----------------------------------------PKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAM--------------RKTALDTFEEGE-----------ICDTVKNLREICDALRAE--GKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATATAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLA 290
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|673031360|ref|XP_008869641.1| (hypothetical protein H310_06372 [Aphanomyces invadans] >gi|574474792|gb|ETW01793.1| hypothetical protein H310_06372 [Aphanomyces invadans]) HSP 1 Score: 66.6254 bits (161), Expect = 1.032e-8 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 64 ANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHES 132 AN++ HK V+IGDG A GFG W+++ + G +YL +EV + ++ W RG L + + W P S Sbjct: 37 ANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSS 105
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|698812774|ref|XP_009839416.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|698812780|ref|XP_009839419.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574105649|gb|ETV71172.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574105650|gb|ETV71173.1| hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 63.1586 bits (152), Expect = 4.734e-8 Identity = 22/71 (30.99%), Postives = 41/71 (57.75%), Query Frame = 0 Query: 64 ANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHESEN 134 +N+++HK V+IGDG A GFG W+++ ++ G Y+ E+ + ++ +W RG + + + W P S Sbjct: 33 SNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTK 103
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|698812778|ref|XP_009839418.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574105648|gb|ETV71171.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 63.1586 bits (152), Expect = 4.811e-8 Identity = 22/69 (31.88%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 64 ANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHES 132 +N+++HK V+IGDG A GFG W+++ ++ G Y+ E+ + ++ +W RG + + + W P S Sbjct: 33 SNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSS 101
BLAST of EWM21783.1 vs. NCBI_GenBank
Match: gi|698812776|ref|XP_009839417.1| (hypothetical protein H257_13559 [Aphanomyces astaci] >gi|574105647|gb|ETV71170.1| hypothetical protein H257_13559 [Aphanomyces astaci]) HSP 1 Score: 63.1586 bits (152), Expect = 1.154e-7 Identity = 22/69 (31.88%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 64 ANDFHHKAVLIGDGLAQGFGSWVSLGNTSGPMRYLNEEVRRNAAVKMEWVFFERGALHSTTQDWMPHES 132 +N+++HK V+IGDG A GFG W+++ ++ G Y+ E+ + ++ +W RG + + + W P S Sbjct: 33 SNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSS 101 The following BLAST results are available for this feature:
BLAST of EWM21783.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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