EWM21789.1, cds8872 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|585102125|gb|EWM21789.1| (hypothetical protein Naga_100065g20 [Nannochloropsis gaditana]) HSP 1 Score: 798.89 bits (2062), Expect = 0.000e+0 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0 Query: 1 MRNISLCLAILLVAGCAVATLPHASPGQSPDRIPLLGVCGGRWGRTAPTPPPAPEVVETPSPAQPLSLASPYANLRALAILSAAAGSWAVLRAPNVREWFDDVRPLQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSAFLQAGLAGAVMVWKVLLKAGVVVPGDAKRLMAVAMGPVKTLLG 406 MRNISLCLAILLVAGCAVATLPHASPGQSPDRIPLLGVCGGRWGRTAPTPPPAPEVVETPSPAQPLSLASPYANLRALAILSAAAGSWAVLRAPNVREWFDDVRPLQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSAFLQAGLAGAVMVWKVLLKAGVVVPGDAKRLMAVAMGPVKTLLG Sbjct: 1 MRNISLCLAILLVAGCAVATLPHASPGQSPDRIPLLGVCGGRWGRTAPTPPPAPEVVETPSPAQPLSLASPYANLRALAILSAAAGSWAVLRAPNVREWFDDVRPLQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSAFLQAGLAGAVMVWKVLLKAGVVVPGDAKRLMAVAMGPVKTLLG 406
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|298709047|emb|CBJ30996.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 174.096 bits (440), Expect = 5.805e-48 Identity = 105/222 (47.30%), Postives = 133/222 (59.91%), Query Frame = 0 Query: 117 QVLILLAWLTNKIAVRIPGRSDG---KSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWV--GRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHD 333 QVL L +W N AV GR DG + KDA VR+F P+ +AF+IW PIFLGE L YQ A +L++L+P L+ A QS WC++FR W + + P+ALL TA L H V+R A+AAG M Y +VHLP+SLHFGW++CATLVN N + ++ P G KL +LASI AV L VT +GDPV A VVAWAL AVA + Sbjct: 51 QVLTLTSWAINTAAVSAGGRLDGPEPEDPKDAKLPLVRYFMPAGWAFSIWGPIFLGEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYISLLPFSDKG-KLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASE 271
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|299470129|emb|CBN78158.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.043 bits (349), Expect = 1.830e-32 Identity = 93/207 (44.93%), Postives = 121/207 (58.45%), Query Frame = 0 Query: 117 QVLILLAWLTNKIAVRIPGRSDGKSWKDAMSS-PVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQP--YLARLAPPLAQALAAQSLWCVAFRPWV--GRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPV 318 QVL AW N A GR DG + + PVRF +P+ +AFAIW PIF GE + +QL P+++ +L+ ++P A A+ Q+LWC +FRPW + ++P+ LL T V L VH +LREA M YL VH+PLSLH GWI+CATLVNLNG+FA L KLGLAL S+ AV LG +TL DP+ Sbjct: 311 QVLAASAWALNMRATFGGGRLDGIGQSGSSGTRPVRFLSPAGWAFAIWGPIFFGEAIYVAFQLMP---LPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPI 514
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|145349756|ref|XP_001419294.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144579525|gb|ABO97587.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 126.331 bits (316), Expect = 4.126e-30 Identity = 99/224 (44.20%), Postives = 121/224 (54.02%), Query Frame = 0 Query: 153 FTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVG--RMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSAFLQAGLAGAVM 374 FTP+ +AFAIW I+ GEF L + LAS A + +AP A A A Q+LWC AFRPW R +V SALL AV L A A+ A + W Y H+PLS+HFGWI+CA LVNLN VA T +L A S A LG+ VTL +GDPV ALV+AWAL AVA D R + + D L L +AR A +A LA V+ Sbjct: 36 FTPAGWAFAIWGAIYAGEFALVAHALASASGGGASEAATRAVAPSWALACAFQALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSA-HRALRAAASAASKAW-YWTTHVPLSMHFGWISCAALVNLNS--HVAKTCAPDTQLATAFLSAFGAGGLGAAVTLTTGDPVYALVIAWALTAVASDGGK-----RTTETLADVPLKALTKAARWGA--RAALASVVV 248
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|551677616|ref|XP_005841561.1| (hypothetical protein GUITHDRAFT_100057 [Guillardia theta CCMP2712] >gi|428185729|gb|EKX54581.1| hypothetical protein GUITHDRAFT_100057 [Guillardia theta CCMP2712]) HSP 1 Score: 114.775 bits (286), Expect = 1.785e-25 Identity = 67/175 (38.29%), Postives = 99/175 (56.57%), Query Frame = 0 Query: 106 LQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGKSWKDAMSSPVRFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGRMQFVPSALLAMTAVGLSRVHTVLREAVA-AGAMRPWDYLIVHLPLSLHFGWITCATLVNLNG 279 ++ F L Q++I + A IPGR D + + +RFFTP+ +AFAIWAPIFLGE L+ F L + L +L +AP A A AQ+LWC+AFRPW + Q++P++LL + A+ L H + + + +GA W +P++LHFGWIT A ++ NG Sbjct: 22 MKRTIFGLQSWQLMISGGYALFFCANLIPGRLDTVLGRPKRTD-LRFFTPAGFAFAIWAPIFLGEMLMMFSVLMPDSLRSPGSGWLEAMAPSYAAASVAQALWCLAFRPWALKYQWIPASLLTIAALALFESHRHVASSYSMSGAASLWSLFACRIPVALHFGWITAAAALSWNG 195
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|1210531929|dbj|GAX09357.1| (hypothetical protein FisN_6Lh272 [Fistulifera solaris]) HSP 1 Score: 113.62 bits (283), Expect = 5.196e-25 Identity = 92/260 (35.38%), Postives = 126/260 (48.46%), Query Frame = 0 Query: 113 LARHQVLILLAWLTNKIAVRIPGRSDGKSWKD-------AMSSPVRFFTP-----------------SAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRP-WVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDL----APSRSLLRK 343 LA Q + A+ N +AV IPGR DG ++ A PV + +P S +AFAIW PI+ GE + T Q L YL ++ P A QSLWC +FRP + G ++ A+L TA LS+VH AVA A P + + LPLS+HFGW T ATLVNL+G A++P + +S +A LG +TL PV L +AWAL A A + AP+ +++K Sbjct: 35 LAFLQGANVAAFCANCLAVSIPGRIDGMQDQEMRPGLLRADDDPVTYESPDYTNVYSPSRGRTMVAPSGWAFAIWGPIYAGEAIFTVAQFFPQS---GLVIYLPSISAPFIAANLFQSLWCASFRPQYQGWASYISVAMLGGTAYSLSQVH-----AVAFTATGPAYWFL--LPLSIHFGWTTAATLVNLSGSVAMSPENSDEAVTAMGHSSAVLATALGVGLTLNHAAPVYGLTLAWALSACADGMKSRDAPAAKIMQK 284
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|219110939|ref|XP_002177221.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411756|gb|EEC51684.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.464 bits (280), Expect = 1.517e-24 Identity = 96/278 (34.53%), Postives = 132/278 (47.48%), Query Frame = 0 Query: 106 LQPKYFPLARHQVLILLAWLTNKIAVRIPGRSDGK--------------------SWKDAMSSPV-----------RFFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLA--PSRSLLRKNKLVD 348 LQ F L Q+L A+ TN AV +PGR DG+ S KD S +P+ +AFAIW PI+LGE Q + + P LQ L +++ P A QSLWC +FRP + ++V +A+L TAV LS+VH + +A Y + PL++HFGW T ATLVNLNG A++ T + AS A LG VTL G PV L +AWAL A A+ + +++ L+K +V Sbjct: 26 LQAVGFSLGSLQLLNAAAFATNVAAVSVPGRIDGQQDAEMRKEVLNPAEPGSGNTSSKDNESCSTFSDVYSASRGRTLVSPAGWAFAIWGPIYLGEAAFCLGQFS---VQP-LQTVLPQISAPFIAANLCQSLWCASFRPSYNKGWAKYVSAAMLGGTAVALSQVHAAVPPGLAG-------YFV---PLTMHFGWATAATLVNLNGCVAMSDVSDT-FVIATGHASALAATALGVGVTLTQGSPVYGLTIAWALAACANGMKQRETKTPLQKGMMVQ 288
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|1210519027|dbj|GAX22025.1| (hypothetical protein FisN_6Hh272 [Fistulifera solaris]) HSP 1 Score: 111.694 bits (278), Expect = 2.429e-24 Identity = 88/242 (36.36%), Postives = 120/242 (49.59%), Query Frame = 0 Query: 129 IAVRIPGRSDGKSWKD-------------------AMSSPVRFFT---PSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRP-WVGRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDL----APSRSLLRK 343 +AV IPGR DG ++ + SP R T PS +AFAIW PI+ GE + T Q L YL ++ P A QSLWC +FRP + G ++ A+L TA LS+VH AVA A P + + LPLS+HFGW T ATLVNL+G A++P + +S +A LG +TL+ PV L +AWAL A A + AP+ +++K Sbjct: 52 LAVSIPGRIDGTQDQEMRPGLLRADDDPYEPPDYTNVYSPSRGRTLVAPSGWAFAIWGPIYAGEAIFTVAQFFPQS---GLALYLPAISAPFIAANLFQSLWCASFRPQYQGWASYISVAMLGGTAYSLSQVH-----AVACTATGPAYWFL--LPLSIHFGWTTAATLVNLSGSVAMSPENSDEFVTAIGHSSAVLATALGVGLTLSHAAPVYGLTLAWALSACADGMKTRDAPAAKVMQK 283
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|1199291759|gb|OUS46849.1| (hypothetical protein BE221DRAFT_145303 [Ostreococcus tauri]) HSP 1 Score: 113.235 bits (282), Expect = 2.759e-23 Identity = 108/292 (36.99%), Postives = 141/292 (48.29%), Query Frame = 0 Query: 94 PNVREWFDDVRPLQPKYFPLARH-QVLILLAWLTNKIAVRIPGRSDGKSWKDA----------------MSSPVR-FFTPSAYAFAIWAPIFLGEFLLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVG--RMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLI--VHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDLAPSRSLLRKNKLVDDDALDCLEISARVSA 363 P+++ F ++ L K A+ +V++ LA+ N +V PGR DG+ K A + S R FTP+ +AFAIW I+ GE +T + L +A AP A A QSLWCVAFRPW R +V SALL A L LR AG++ P + L +PLSLHFGWI+CA LVN+N VA T ++ A S A LG+ V++ SGD V VVAWAL AVA D R + V D LD L +A A Sbjct: 319 PSLKSIFAEITSLTAKAIAGAQPWKVVVALAYGVNVASVSAPGRIDGEMQKRAAEAKRAKPEEKAHGVPLDSEFRSLFTPAGWAFAIWGVIYAGEMAMTAHALLGG------DERVAAAAPYWAVACGLQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALR---GAGSISPSEALFWTTRVPLSLHFGWISCAALVNVNS--HVAKTCAIDTQIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGGK-----RTTETVRDHTLDALRTAASWGA 594
BLAST of EWM21789.1 vs. NCBI_GenBank
Match: gi|223994977|ref|XP_002287172.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976288|gb|EED94615.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 109.383 bits (272), Expect = 2.972e-23 Identity = 87/259 (33.59%), Postives = 116/259 (44.79%), Query Frame = 0 Query: 113 LARHQVLILLAWLTNKIAVRIPGRSDGKSWKD----------------------------------AMSSPVRFFTPSAYAFAIWAPIFLGEF-LLTFYQLASNRLAPALQPYLARLAPPLAQALAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHDL 334 LA + L L A+ +N +AV +PGR DG+ + +++ PS +AFAIW PI+LGE +T LAS+ AL L + P A QS WC +FRP G ++V A+L TA LS VH+ A+ A YL+ LPL++HFGW + ATLVNLNG A L +S A LG VT+A P L +AWAL A A + Sbjct: 36 LAILKGLNLAAFASNAVAVSVPGRLDGQQDSEMREGNLNPSKPNTRNTKEDSPLVRGGKEESTSAYSLNRSRTLINPSGWAFAIWGPIYLGEAAFVTSQMLASDTTLTALSALLPHITAPFVAANILQSFWCASFRPSYGEGWKRYVSVAMLGGTAYSLSLVHSAGCAALVADQTLQ-SYLL--LPLTMHFGWTSAATLVNLNGSLASDVNASPRSLTALGHSSALAATLLGVGVTIAHASPAYGLTLAWALAACADGM 291 The following BLAST results are available for this feature:
BLAST of EWM21789.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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