EWM21800.1, cds8868 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|585102136|gb|EWM21800.1| (Sugar fermentation stimulation protein [Nannochloropsis gaditana]) HSP 1 Score: 1012.29 bits (2616), Expect = 0.000e+0 Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0 Query: 1 MRAAALGPCVFLLATTTPSIGLIFSGRVVASTARVRRSISCMPATPKARVLVTCDRTRRSNAERDASSSEAGNPQTRCRKRDQVKIATVTAPAASDSFIGNDDKSPAVTYRKTRTKVEVADQASTSSKCALTVASSQPTRKAKKGRRQASTASDKGVISKSARSRREVAIGETSIATTEVVEGDDQSRVPAPPSNAFNATSLMRASTDTASAASAVLLHTLPKLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFVVTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIVWDAEGE 497 MRAAALGPCVFLLATTTPSIGLIFSGRVVASTARVRRSISCMPATPKARVLVTCDRTRRSNAERDASSSEAGNPQTRCRKRDQVKIATVTAPAASDSFIGNDDKSPAVTYRKTRTKVEVADQASTSSKCALTVASSQPTRKAKKGRRQASTASDKGVISKSARSRREVAIGETSIATTEVVEGDDQSRVPAPPSNAFNATSLMRASTDTASAASAVLLHTLPKLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFVVTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIVWDAEGE Sbjct: 1 MRAAALGPCVFLLATTTPSIGLIFSGRVVASTARVRRSISCMPATPKARVLVTCDRTRRSNAERDASSSEAGNPQTRCRKRDQVKIATVTAPAASDSFIGNDDKSPAVTYRKTRTKVEVADQASTSSKCALTVASSQPTRKAKKGRRQASTASDKGVISKSARSRREVAIGETSIATTEVVEGDDQSRVPAPPSNAFNATSLMRASTDTASAASAVLLHTLPKLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFVVTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIVWDAEGE 497
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|873231334|emb|CEM08569.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 134.42 bits (337), Expect = 2.298e-31 Identity = 85/279 (30.47%), Postives = 135/279 (48.39%), Query Frame = 0 Query: 229 VMHRTSKEVKSPYLCDIQLAGAETL--TLC---------HTPSLGCSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIARE--GEKRACLLFISQRTDVASF-VVTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIVWD 493 ++ R S +K+PY+ D+++ + + C H PSL C+G++ G+ + ++ S S K+SH + + G VG HP A + + +LE H+ P L + R +VT G +R DFV + +G +E KN AD +G + + + Y AIFP G +K VS RA+KH EL + + + RA +LFI R+D F DM + +++A E GV L A+ + WDG GRA +P+V+D Sbjct: 78 IVKRPSAVIKTPYVADVRILEQDAMGNVTCDESADPLQAHCPSLDCAGMIVPGSQVRMTPSASGKGKTSHTIWLAEEPRPMGEVASVGAHPQLAERMVKTMLER-HMIPELAGYSSFRTQVTHGKARVDFVLDYPNGDELFLEVKNCVCADYPEGQVPSERSSIGVYTSSVQPYRCCAIFPHGAKKPKIKVVSDRAIKHAHELTNMVKRTTSKPRAAILFIVNRSDTLQFRPCHEADMLFAQVLKRAHEAGVQLLAYRIAWDG--GRARSGGSIPVVFD 353
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|159482288|ref|XP_001699203.1| (hypothetical protein CHLREDRAFT_206136 [Chlamydomonas reinhardtii] >gi|158273050|gb|EDO98843.1| hypothetical protein CHLREDRAFT_206136 [Chlamydomonas reinhardtii]) HSP 1 Score: 116.316 bits (290), Expect = 1.808e-24 Identity = 101/335 (30.15%), Postives = 143/335 (42.69%), Query Frame = 0 Query: 229 VMHRTSKEVKSPYLCDIQLAGAET----------------------------LTLCHTPSLGCSGLVTTGATILVSQSTS-----STAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLP--RIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFD---GTKKERAALLAACITPP----DAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEK----------------------------RACLLFISQRTDVASF-VVTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIVW 492 ++ R S VK+PY+ DIQL L L H P++ C+G+VT GAT+ +S+S A +SH + V GT+ VG HP A LA L+ + +L R+ L + T GN+R D+V DGS ++E KNV AD D G R A+ + P D Y A+FP G +K VS RA+KHV EL A+ + G + R +LF+ R+D A+F D + ++ A E GV L A+ V W G G A+ R LP+V+ Sbjct: 69 LIRRPSASVKTPYVADIQLLPPPPPSAHPDGEAGKDAAAAGAGVTEHGRVGELVLAHAPAMDCAGMVTPGATVYMSKSAPRAPGVPPAATSHAIQLVEDQRPSGTAAVVGYHPQLAERLAAELVRRRLLEAALGAGRVVGLESQRTFGNTRVDYVLRMEDGSRMLLEVKNVVCADFPDVPGGVPPGRPAVGVYKVPVPSGCLDDYSPTALFPHGAQKPKIKVVSDRAIKHVTELTALHKHGRELPEAGDDSGSSSGQGKGEGEGSAGEGRLRCAVLFLVNRSDCAAFRPCHEADPLFAQVLKAAEEAGVKLVAYDVVWRG--GAAYAGRHLPVVF 401
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|1210526960|dbj|GAX14287.1| (hypothetical protein FisN_1Hh483 [Fistulifera solaris]) HSP 1 Score: 108.612 bits (270), Expect = 2.166e-22 Identity = 93/326 (28.53%), Postives = 139/326 (42.64%), Query Frame = 0 Query: 199 ATSLMRASTDTASAASAVLLHTLPKLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTSSTAKSSHV-------------LHHVLQAEADGTSH-------WVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNF---DGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDP----VSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFVVTSTDM-QYRTAVRKAGENGVVLKAFSVRW---DGASGRAFLH-RELPIVW 492 A L A DT S L + +L A ++ R SK +SPY+ DI L + + + H P+L G G T+LV +T H L + H WVG HP +A+ + + P +E+++++VT+GN R DF TH DGS +VE K V D + + + L++ + Y + AIFP G K+ VS RA+ HV+EL + E + +A +LF+ R D +F + + +R A + GV + A V W D G F ELPI W Sbjct: 36 AKKLFAADPDTESKELFSLFNEDDELVLAKMVARPSKRNRSPYVADIALIDSGRVAIAHVPNLDMGGKCIPGCTLLVKAATDKKGNKIGADAVSPKYGTPKCEFHAQLLLVDESNLHPKLYPPTWVGAHPNLGERIAECWIRNNVLGP----VESVKRQVTIGNMRSDFEITHKDGSKRLVEVKQVVDTDYYVEAPPSDTMKCRFLSSRV----PYRRTAIFPWGNSKQKGPDGEAVVSARAINHVRELTRLVEERQYKATVLFVVVRGDAEAFRPNADSCPSFAKYLRLAEQAGVQVLAKRVMWGEKDHELGSCFDDPSELPIEW 353
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|1210521288|dbj|GAX20036.1| (hypothetical protein FisN_1Lh483 [Fistulifera solaris]) HSP 1 Score: 100.138 bits (248), Expect = 2.960e-19 Identity = 87/310 (28.06%), Postives = 128/310 (41.29%), Query Frame = 0 Query: 223 KLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTSSTAKSSHV-------------LHHVLQAEADGTSH-------WVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDA-----------YHKIAIFPDGYRKKVSDP----VSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFVVTSTDM-QYRTAVRKAGENGVVLKAFSVRW---DGASGRAFLH-RELPIVW 492 +L A ++ R SK +SPY+ DI L + + H P+L G +G+ +LV +T H L + H WVG HP +A+ + + P +E+++++VT+GN R DF TH DGS +VE K V D + PPD Y + AIFP G K+ VS RA+ HV+EL + E + +A +LF+ R D F + + +R+A + GV + A V W D G F ELPI W Sbjct: 95 ELVLAKMVARPSKRNRSPYVADIALIDSGREAIAHVPNLDMGGKCISGSILLVKAATDKKGNKIGADAVSPKYGTPKCEFHTQLLLVDESNLHPKLYPPTWVGAHPNLGERIAECWIRNNVLGP----VESVKRQVTIGNMRSDFEITHKDGSKRLVEVKQVVDTDYY------------VEAPPPDTMKCRFLSSRVPYRRTAIFPWGNSKQKGPDGEAVVSARAINHVRELTRLVEERQYKATVLFVVVRGDAEVFRPNAHSCPSFAKYLRQAEQAGVQVLAKRVMWGEKDHELGSCFDDPSELPIEW 388
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|551562000|ref|XP_005767809.1| (hypothetical protein EMIHUDRAFT_436816 [Emiliania huxleyi CCMP1516] >gi|485618355|gb|EOD15380.1| hypothetical protein EMIHUDRAFT_436816 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 98.2117 bits (243), Expect = 1.229e-18 Identity = 94/310 (30.32%), Postives = 128/310 (41.29%), Query Frame = 0 Query: 224 LFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLGCSGLVTTGATILVSQSTS---------------STAKSSHVLHHVL-----QAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEV---TMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPD--------------AYHKIAIFPDGY-RKKVSDP---VSPRALKHVQELEAIAREGEK----------------RACLLFISQRTDVASFVVTSTDM-QYRTAVRKAGENGVVLKAFSVRW 475 L V+ R S KSPY+ D+QL+ + + H PS+ G GA +L+ T K +L + A A G WVG HP A AL+ G + L I + +EV + R DF+ TH D S T++E K V V ++D I+PP+ Y + AIFP G +K D VS RA+KHV+EL AIAR GEK RAC+LFI R+D F + +R+A + GV + A VRW Sbjct: 55 LVPGVVLRRPSARNKSPYVGDVQLSDGR-VAIAHMPSMDMGGKCVPGAAVLLKTQIDKATKLPIGPDVVGKYGTPKCEFILKLLRCTEPENASAAGGGCWVGAHPSLGEKAANALIAGGSLESELGEIAKIEREVPNVAGTDMRCDFLLTHRDRSKTILEVKTV-VDTDYD-----------PAISPPERFPNRKCVFLGKGSPYARAAIFPWGNSNQKGPDGEKVVSARAIKHVRELTAIAR-GEKREAPPEGTKAESSPPLRACVLFIVVRSDATYFRPNEEACPSFARYLREAQQAGVRVLARRVRW 350
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|673014464|ref|XP_008861193.1| (sugar fermentation stimulation protein [Aphanomyces invadans] >gi|574482791|gb|ETW09782.1| sugar fermentation stimulation protein [Aphanomyces invadans]) HSP 1 Score: 93.5893 bits (231), Expect = 2.786e-17 Identity = 82/284 (28.87%), Postives = 131/284 (46.13%), Query Frame = 0 Query: 217 LLHTLPKLFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLG-CSGLVTTG-ATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLP------RIETLRKEVT-MGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQEL-EAIAREGEKRACLLFISQRTDVASFVVTST-DMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELP 489 +++ P L + ++ R + +L D+QL ++T+ H P+ G GL+ A + +S S ++ K +H L ++ + WVG H +AN + + L G LP +I +++ EV +SR DFV T DG T VE K+V +A+ + T A + P + A+FPD VS RA KHVQEL I +RA ++F+ QR D +F + D + +A GVV+ A++ D + R L LP Sbjct: 90 IVYEFPTLVSGKLIKRYKR-----FLADVQLDNSDTVVTVHCPNTGPMIGLLDLPLAPVRLSVSDNAKRKYAHTLEYIQVVNDANEATWVGVHSASANRMVETALRNGW----LPEVVGHRQIMSIQAEVKHTKDSRVDFVVTTDDGVDTFVEVKSVTLANASEPT---------ADVMP---QQRCAVFPDT--------VSTRASKHVQELVHLIQNNQRRRAAIVFLVQRGDCTAFAPSEVHDPAFAAHCEEAKAAGVVIHAYACALDSSKPRVMLLGPLP 344
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|322511040|gb|ADX06353.1| (putative sugar fermentation stimulation protein [Organic Lake phycodnavirus 2]) HSP 1 Score: 88.5817 bits (218), Expect = 3.125e-17 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0 Query: 331 IETLRKEVTMGNSRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAR-EGEKRACLLFISQRTDVASFVVTSTDMQYRTAVRKA 461 ++ L +E M NSRFDF+ D ++E K+VP+ + D A FPDGYRKK +D +SPRALKH+QEL+ I + R L F+ QR+D SF ++ D Y+ AV++A Sbjct: 6 LKKLEREKKMLNSRFDFMGIDQDNKRFILEVKSVPLCQDED-----------------------AFFPDGYRKKKTDIISPRALKHIQELQQIKEMHPDYRTILCFVVQRSDATSFRISDNDPIYKDAVKEA 114
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|652445372|ref|WP_026840363.1| (DNA/RNA nuclease SfsA [Geobacter bremensis]) HSP 1 Score: 88.5817 bits (218), Expect = 2.221e-16 Identity = 87/275 (31.64%), Postives = 130/275 (47.27%), Query Frame = 0 Query: 221 LPK-LFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLG-CSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGN-SRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFV-VTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIV 491 LP+ LF T++ R + +L D++L +T HTP+ G G G +L+S+S S T K H V +ADGT WVG + N+LA+ + +G + L + +R EV G+ SR D + + G + VETKNV + + DG +A+FPD VS R KH++EL + R+G RA LFI QR D A+ + D Y +R+A +NGV + A+ R + L R LP++ Sbjct: 3 LPQPLFQGTLIRRYQR-----FLADVELEDGTVVT-AHTPNTGSMMGCACPGNLVLLSKSASLTRKYPHSWELV---QADGT--WVGINTQLPNLLAREAILDGTI-SELSGYQQIRGEVPYGSGSRIDLLLSGEQG-LCYVETKNVTLVE--DG---------------------VALFPDA--------VSARGQKHLRELMEMVRQGH-RAVNLFIVQRADGAALAPADAIDPVYGRLLREAAQNGVEILAY--RAEVTRTEVRLERALPVL 230
BLAST of EWM21800.1 vs. NCBI_GenBank
Match: gi|501522960|ref|WP_012530897.1| (DNA/RNA nuclease SfsA [Geobacter bemidjiensis] >gi|238690885|sp|B5EG09.1|SFSA_GEOBB RecName: Full=Sugar fermentation stimulation protein homolog >gi|197088203|gb|ACH39474.1| DNA-binding protein SfsA [Geobacter bemidjiensis Bem]) HSP 1 Score: 88.1965 bits (217), Expect = 3.202e-16 Identity = 87/275 (31.64%), Postives = 130/275 (47.27%), Query Frame = 0 Query: 221 LPK-LFTATVMHRTSKEVKSPYLCDIQLAGAETLTLCHTPSLG-CSGLVTTGATILVSQSTSSTAKSSHVLHHVLQAEADGTSHWVGTHPMTANVLAQALLEEGHVFPSLPRIETLRKEVTMGN-SRFDFVATHADGSVTVVETKNVPVADNFDGTKKERAALLAACITPPDAYHKIAIFPDGYRKKVSDPVSPRALKHVQELEAIAREGEKRACLLFISQRTDVASFV-VTSTDMQYRTAVRKAGENGVVLKAFSVRWDGASGRAFLHRELPIV 491 LP+ LF T++ R + +L D++L +T HTP+ G G G +L+S+S S T K H V +ADGT WVG + N+LA+ + +G + L + +R EV G+ SR D + + G + VETKNV + + DG +A+FPD VS R KH++EL + R+G RA LFI QR D A+ + D Y +R+A +NGV + A+ R + L R LP++ Sbjct: 3 LPQPLFQGTLIRRYQR-----FLADVELDDGTVVT-AHTPNTGSMMGCACPGNRVLLSKSASLTRKYPHSWELV---QADGT--WVGINTQLPNLLAREAILDGTI-SELSGYQQIRGEVPYGSGSRIDLLLSGEQG-LCYVETKNVTLVE--DG---------------------VALFPDA--------VSARGQKHLRELMEMVRQGH-RAVNLFIVQRADGAALAPADAIDPVYGRLLREAAQNGVEILAY--RAEVTRTEVRLERALPVL 230 The following BLAST results are available for this feature:
BLAST of EWM21800.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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