EWM21810.1, cds8859 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585102147|gb|EWM21810.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 721.85 bits (1862), Expect = 0.000e+0 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGAARGLSGGKAGRTGGGGGGGEGGGRCRRRGKGGGDSGPRRGKRSR 353
MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGAARGLSGGKAGRTGGGGGGGEGGGRCRRRGKGGGDSGPRRGKRSR
Sbjct: 1 MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGAARGLSGGKAGRTGGGGGGGEGGGRCRRRGKGGGDSGPRRGKRSR 353
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585112414|gb|EWM29833.1| (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 446.047 bits (1146), Expect = 1.736e-154 Identity = 217/277 (78.34%), Postives = 249/277 (89.89%), Query Frame = 0
Query: 12 DPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLY 288
DP PLY +S+Y T DP PVRFVQVFQ++P LEPFY EWEK+FDVS+ F+ IRD++ +PI+A ILYLSFL+EGKKYIERR++EGKGP+NLG FPA WN FLA FS+ GA RVVPHFLFLFTHKDFK TVCEAPD AGYGDGAAG+WVMLFTVSK+FEL+DTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPG+YF+AMNY+VHA+MYSYYFLMELRLWPKW +P++IT+ QI QMLVGVG+T +A+ + DPSCA+VR LIPWCAAMYATYLY
Sbjct: 6 DPAPLYETSQYITRDPVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQADPSCAVVRDLIPWCAAMYATYLY 282
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|553178743|ref|XP_005852597.1| (fatty-acyl elongase [Nannochloropsis gaditana CCMP526] >gi|422295935|gb|EKU23234.1| fatty-acyl elongase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 353.984 bits (907), Expect = 1.302e-120 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVI 174
MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDN+ALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAG+WVMLFTVSKLFELVDTV+
Sbjct: 1 MQSALPAWLWRDPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNQALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGLWVMLFTVSKLFELVDTVL 174
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585107618|gb|EWM25755.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 280.411 bits (716), Expect = 4.000e-89 Identity = 142/301 (47.18%), Postives = 195/301 (64.78%), Query Frame = 0
Query: 33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPS-CALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGAARGLSGGKAGRTGGGGGGGEGGG 332
F+Q +Q PW EPFY EK FDV + + N LP+V+ ILY + ++ +R P+ A+WN LAAFS+LGA R+VPH L+ T FK TVC P++ GDGA+G+W +LFT+SKL ELVDT+ + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YF+AMNY+VHA+MYSYYFLM ++ PKW NP++IT QI QM+ GV ITV F ++RDPS C +V ++ + + +Y +YLY F+ F ++RFF + + P A+R + GR G G
Sbjct: 37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKR------PVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMN-GDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFFCPPQ-SVPPASRPVGKEDQGREEGWKTAMTNGA 329
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585107617|gb|EWM25754.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 251.521 bits (641), Expect = 3.806e-78 Identity = 134/320 (41.88%), Postives = 196/320 (61.25%), Query Frame = 0
Query: 13 PRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSR-DPSCALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKPAAPGAARGLSGGKAGRTGGGGGGGEGG 331
P L A++R TA + F+Q +Q PWLE FY +EKNF+ F+ + N + ++ +Y+S +I +++R + NL A WN FLA +S +GA RVVPH L+ + FK TVC AP GDGA G+WV LFT+SK+ EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YF+AMNY+VH++MY+YYFLM ++ PKW NP++IT QI QMLVGV I+ F++S D SCA+ ++ A +YA+YLY F+ F ++RFF + +AG+ G +
Sbjct: 20 PETLTATTRVYTAR-NTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYIN-GDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF-------------VKNARAGQEGKVAASAKKN 319
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585110649|gb|EWM28304.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 249.595 bits (636), Expect = 2.721e-77 Identity = 137/301 (45.51%), Postives = 182/301 (60.47%), Query Frame = 0
Query: 26 DPESP----VRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSR---DPSCALVRGLIPWCAAMYATYLYFFVLFFLERFFPA-FKPAAPGAARGLSGGKA 318
PE P F Q+FQ +P +EPFYMEWEK +D S ++ ++ +PI ILY+ + G+ ++ R+ P +L A+WN L+ FS++G RVVPH ++L K C AP+ YG+ A G WV F +SKL EL+DT +VL+ K FLHWYHHVTVLL+TWF Y+ NPGI FVAMNYSVHA+MY YYFLM +R+ P W P +IT+ QI QM+VGV +AF+ + CA+ + L+ C MY+TYLY F F + RF K APG A G+S KA
Sbjct: 30 QPEGPNSRGSTFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRK-----PFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVA--TAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKA-GVSKMKA 321
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|256750562|gb|ACV21066.1| (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 227.639 bits (579), Expect = 7.414e-69 Identity = 131/288 (45.49%), Postives = 170/288 (59.03%), Query Frame = 0
Query: 22 YKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDN-EALPIVATILYLSFLIEGKKY-IERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFF-SRDPS-CALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKP 304
YK+ + P F Q+FQ P L+P Y ++EKNF S+ + +D LP+ +Y +I G K + R + E K + A WN L+ FS G R VPH L FK T+C P + YG+GA GMWVMLF SK+ ELVDTV +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHA+MY+YY+L + WPKW P IT+AQI QM+VGVGI S+F+F DP C + R + A MY +YLY F FF+ RF KP
Sbjct: 24 YKSIPDKVP--FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTAL------ACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAET-YGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKP 302
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|585111978|gb|EWM29442.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 228.794 bits (582), Expect = 1.444e-68 Identity = 129/279 (46.24%), Postives = 168/279 (60.22%), Query Frame = 0
Query: 31 VRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDN-EALPIVATILYLSFLIEGKKYIERR-RREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFF-SRDPS-CALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKP 304
V F Q+FQ P L PFY E+EKNF SS ++ ALP+ +Y ++ G K +E R + E K + A WN L+ FS G R VPH L T FK T+C P + YG+GA G+WVMLF SK+ ELVDTV +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHA+MY+YY+L ++ WP W P IT+AQI QM+VGVGI V++F++ DP C + + A MY +YLY F FF+ RF KP
Sbjct: 29 VPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTAL------ACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAET-YGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKP 300
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|553192576|ref|XP_005855601.1| (fatty-acyl [Nannochloropsis gaditana CCMP526] >gi|422293464|gb|EKU20764.1| fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 226.868 bits (577), Expect = 1.656e-68 Identity = 129/279 (46.24%), Postives = 168/279 (60.22%), Query Frame = 0
Query: 31 VRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDN-EALPIVATILYLSFLIEGKKYIERR-RREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYS-ARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFF-SRDPS-CALVRGLIPWCAAMYATYLYFFVLFFLERFFPAFKP 304
V F Q+FQ P L PFY E+EKNF SS ++ ALP+ +Y ++ G K +E R + E K + A WN L+ FS G R VPH L T FK T+C P + YG+GA G+WVMLF SK+ ELVDTV +V + FLHWYHH+TVLL+ W SY+ + G+YFVAMNYSVHA+MY+YY+L ++ WP W P IT+AQI QM+VGVGI V++F++ DP C + + A MY +YLY F FF+ RF KP
Sbjct: 29 VPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTAL------ACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAET-YGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKP 300
BLAST of EWM21810.1 vs. NCBI_GenBank
Match: gi|1210521613|dbj|GAX19603.1| (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 211.075 bits (536), Expect = 7.995e-63 Identity = 117/261 (44.83%), Postives = 150/261 (57.47%), Query Frame = 0
Query: 41 PWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGIT-VSAFFFSRDPSCALVRGLIPWCAAMYATYLYFFVLFFLERFF 299
P +E Y +EK +D ++ +P+ A I+Y + G+ Y +R R N A WN FL+ FS +G R PH TH F+ +C P + YG G+ G+WV LF +SK EL+DT +V+ K +FLHWYHH+TVLLY W SY +P GI F AMNY+VHA MY YYFLM LR+ PKWFNPM IT QI QM+VGV T VS ++F D CAL RG MY +YL+ F FF R+F
Sbjct: 24 PQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRW-----NWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDP-RTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 278 The following BLAST results are available for this feature:
BLAST of EWM21810.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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