EWM21827.1, cds8845 (CDS) Nannochloropsis gaditana

Overview
NameEWM21827.1
Unique Namecds8845
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:366163..370920 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21827.1
Productquinoprotein amine beta chain-like ric1-like guanyl-nucleotide exchange factor
Orig transcript idgnl|cribi|Naga_100051g31.8866.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:366163..370920 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR009771Ribosome_control_1
IPR001680WD40_repeat
Homology
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|585102169|gb|EWM21827.1| (quinoprotein amine beta chain-like ric1-like guanyl-nucleotide exchange factor [Nannochloropsis gaditana])

HSP 1 Score: 3250.69 bits (8427), Expect = 0.000e+0
Identity = 1585/1585 (100.00%), Postives = 1585/1585 (100.00%), Query Frame = 0
Query:    1 MAADPTGHYIAILTRHDLQIWSAGHHQLLLGWATTIDDGDEEVLLQEDEEVYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDLAPGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDKETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQLPSPPAILLQICYSDVSHMLGAVLADGRVLLSNLPGPRFSVQTLPASHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTFPRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAYSVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRSRSKASRRPGSGSLGTGRGRGVDGATLDGVYWTDSAVLMVGDVHKLLFYRLARDHSPRGVSIALSGHLEIPSNEGRGRDAEATADDPNALHSDGIGVTAVSDVEPSSRASNSAHSMKPMQTLGDGETARRIVLLPEVSPLSVALLSSTDTLYQIQVQDAATFCVGTGVSNLWELSLPTGEASMRPCYVLYCGDRGFSLWLPSFCHKKALQLTREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSSSADRVDIPPRFQVGLQRRPCYQVAFRFLLFLHSMLKAEKKSLSECGASSDESSLEEARSRASASNAPSGLQAGSSMGTKTTSLNNTCMDVSAGSGSAAEAVAKVVAGIFDELYSQPATRIQLADALDFLLRSCIEAVGKAQSRLQKQTRAKLSSQSPSSERGADREAPMPASYFTSLLTSTEQVKEALALCQREAGLGLFYEVIVRVARKIEPSRLKYMFPLPDLNGQGFGDTPVTLFHKCLRTKKLHTALLYLPLIDPPQRMPEDVGPLTPSSDRRTRLLANKEEVEDVQRVHRLALELLWAVLRRGGQEWRMLKQLWRFIQKREEAMTLYAQEADVLNQGGGNSGLVRGNGSGADDLRNDTGNGLLFGALYRATFGMLGAPSGAGCGGSVPQPKVMESAGRVGDGAVPPSPWSERNGQPTTTPPNAYLLHLPRTMPSVPATRGEGAYAWMYEPDEEAAGPHSAMADFDVLQHADSGVEVLTLFASMCLATLRLREVVDALLLLGGGDPRRVPFPTLQPWMKAESSMSTGYNARHKEGGEGSSKWQQHATSSSLWPWARFEAPKDIVLDTFLAICEQFLTSTPSTSATGAFSGKKWSCTPEECLAVFGRVCVELRDYECLLALGTFSKDTTTVTAALKRSTIRVAEYRRTFLDDRMEAGGLSVKEFVQNCTEPFLLVEDMVRDH 1585
            MAADPTGHYIAILTRHDLQIWSAGHHQLLLGWATTIDDGDEEVLLQEDEEVYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDLAPGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDKETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQLPSPPAILLQICYSDVSHMLGAVLADGRVLLSNLPGPRFSVQTLPASHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTFPRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAYSVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRSRSKASRRPGSGSLGTGRGRGVDGATLDGVYWTDSAVLMVGDVHKLLFYRLARDHSPRGVSIALSGHLEIPSNEGRGRDAEATADDPNALHSDGIGVTAVSDVEPSSRASNSAHSMKPMQTLGDGETARRIVLLPEVSPLSVALLSSTDTLYQIQVQDAATFCVGTGVSNLWELSLPTGEASMRPCYVLYCGDRGFSLWLPSFCHKKALQLTREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSSSADRVDIPPRFQVGLQRRPCYQVAFRFLLFLHSMLKAEKKSLSECGASSDESSLEEARSRASASNAPSGLQAGSSMGTKTTSLNNTCMDVSAGSGSAAEAVAKVVAGIFDELYSQPATRIQLADALDFLLRSCIEAVGKAQSRLQKQTRAKLSSQSPSSERGADREAPMPASYFTSLLTSTEQVKEALALCQREAGLGLFYEVIVRVARKIEPSRLKYMFPLPDLNGQGFGDTPVTLFHKCLRTKKLHTALLYLPLIDPPQRMPEDVGPLTPSSDRRTRLLANKEEVEDVQRVHRLALELLWAVLRRGGQEWRMLKQLWRFIQKREEAMTLYAQEADVLNQGGGNSGLVRGNGSGADDLRNDTGNGLLFGALYRATFGMLGAPSGAGCGGSVPQPKVMESAGRVGDGAVPPSPWSERNGQPTTTPPNAYLLHLPRTMPSVPATRGEGAYAWMYEPDEEAAGPHSAMADFDVLQHADSGVEVLTLFASMCLATLRLREVVDALLLLGGGDPRRVPFPTLQPWMKAESSMSTGYNARHKEGGEGSSKWQQHATSSSLWPWARFEAPKDIVLDTFLAICEQFLTSTPSTSATGAFSGKKWSCTPEECLAVFGRVCVELRDYECLLALGTFSKDTTTVTAALKRSTIRVAEYRRTFLDDRMEAGGLSVKEFVQNCTEPFLLVEDMVRDH
Sbjct:    1 MAADPTGHYIAILTRHDLQIWSAGHHQLLLGWATTIDDGDEEVLLQEDEEVYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDLAPGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDKETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQLPSPPAILLQICYSDVSHMLGAVLADGRVLLSNLPGPRFSVQTLPASHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTFPRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAYSVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRSRSKASRRPGSGSLGTGRGRGVDGATLDGVYWTDSAVLMVGDVHKLLFYRLARDHSPRGVSIALSGHLEIPSNEGRGRDAEATADDPNALHSDGIGVTAVSDVEPSSRASNSAHSMKPMQTLGDGETARRIVLLPEVSPLSVALLSSTDTLYQIQVQDAATFCVGTGVSNLWELSLPTGEASMRPCYVLYCGDRGFSLWLPSFCHKKALQLTREACQEPFLDPTFNPDVEGVIMGIHGPTSSLIFLTQSCTQPQSSSEHSSSADRVDIPPRFQVGLQRRPCYQVAFRFLLFLHSMLKAEKKSLSECGASSDESSLEEARSRASASNAPSGLQAGSSMGTKTTSLNNTCMDVSAGSGSAAEAVAKVVAGIFDELYSQPATRIQLADALDFLLRSCIEAVGKAQSRLQKQTRAKLSSQSPSSERGADREAPMPASYFTSLLTSTEQVKEALALCQREAGLGLFYEVIVRVARKIEPSRLKYMFPLPDLNGQGFGDTPVTLFHKCLRTKKLHTALLYLPLIDPPQRMPEDVGPLTPSSDRRTRLLANKEEVEDVQRVHRLALELLWAVLRRGGQEWRMLKQLWRFIQKREEAMTLYAQEADVLNQGGGNSGLVRGNGSGADDLRNDTGNGLLFGALYRATFGMLGAPSGAGCGGSVPQPKVMESAGRVGDGAVPPSPWSERNGQPTTTPPNAYLLHLPRTMPSVPATRGEGAYAWMYEPDEEAAGPHSAMADFDVLQHADSGVEVLTLFASMCLATLRLREVVDALLLLGGGDPRRVPFPTLQPWMKAESSMSTGYNARHKEGGEGSSKWQQHATSSSLWPWARFEAPKDIVLDTFLAICEQFLTSTPSTSATGAFSGKKWSCTPEECLAVFGRVCVELRDYECLLALGTFSKDTTTVTAALKRSTIRVAEYRRTFLDDRMEAGGLSVKEFVQNCTEPFLLVEDMVRDH 1585          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|299469732|emb|CBN76586.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 141.739 bits (356), Expect = 7.584e-30
Identity = 73/162 (45.06%), Postives = 110/162 (67.90%), Query Frame = 0
Query:  470 IVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKD 630
            IV ++ LR AR +  + + L LQG + +A ++ +PW+ ++L W  + V P Y S N P+  V+ S +G  +AVAG RG A+YSRP  RWRLFGN+ QERE++VAGM WWGE A+VV ++   + G  +L++SR HL + +L+  P+ LP G RPLF++ V++
Sbjct:  683 IVAFDFLRRAR-SNLSSSLLSLQGSDRIALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASR--HKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQAVQE 841          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|1025124340|ref|XP_016463683.1| (PREDICTED: RAB6A-GEF complex partner protein 1-like isoform X2 [Nicotiana tabacum])

HSP 1 Score: 101.293 bits (251), Expect = 6.725e-18
Identity = 110/421 (26.13%), Postives = 170/421 (40.38%), Query Frame = 0
Query:  246 SHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCL-QGVNTLAFLEQRPWNP-RLL----------SWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            SH S +   VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S     + G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L                A EE  P R                                       AF+    CL +GV+ + ++ Q  +   RLL             H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD+SSLLC     P  T+P+ ++  +D     +R
Sbjct:  207 SHHSLNNSAVVH-LEFSLPLRLLVVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAVCAAVASEQQLLVVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLY---------------AIEEGSPERII-------------------------------------AFSFGKCCLNRGVSGITYVRQVIYGEDRLLVVQSEDTDELKLLHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDHSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|971515389|dbj|GAQ82818.1| (hypothetical protein KFL_001250140 [Klebsormidium nitens])

HSP 1 Score: 101.293 bits (251), Expect = 1.188e-17
Identity = 165/667 (24.74%), Postives = 252/667 (37.78%), Query Frame = 0
Query:    6 TGHYIAILTRHDLQIWSAGHHQLLLGWATTIDDGDEEVLLQEDEEVYVKPGVMWSRGGQEICALRLDGAVAFFQVHYLSHSPHIDGIPLPEWMDLAPGEGVSSMLDVPHAVDVLPLRRLYLGKGQRATCLSAGLWRQHLLLGKDKETAILDVSWNGYVQNEYSLVIQAEADGEATASATNAGTRSTDPPILPTQLPS---------------PPAILLQICYSDVSHMLGAVLADGRVLL--SNLPGPRFSVQTLPASHESRDPPGVVEAL--AFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRARSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEISIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCS--LNVWDTCQWCRPMTTFPRG--------------PETPATR----VKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRA--GCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKD 630
             G Y+ ++T   +QIW+AG H++ +G     +   E   L++D          ++     +  L  + ++ F+ V                   L P  G  S   VP        R     + + A C +      HLL+G       L VSW G ++    L     A G    S T+    +   PI P Q P+               P   +  + Y     +L AVLADGRV+L  S   G R   + +P         GV +A+  A  P   VLAVG    +V +F +                                          + NA+     + R ++L   G      G V  + ++PD ++ AV   W C   L VW +   CR M T  +G              P TP+ R    +   V  L W Q GY+L+ A               E K   R  Q    +M                C+ R  +         A     +Q  + +  ++    +   L   H+ VP  Y + N PV  VA +  G  LA+AG+RGL LY+   +RWR+FG++ QE+++   G+ W G    +VVA L   A    ++ +Y R+HLD SSLLC  +PLP   RP+ ++  +D
Sbjct:   29 VGEYLVLVTSTVIQIWTAGQHRVKIG-----EVAREAESLEQDG---ANECASFNEAASTLAVLTGNNSLLFYDVITTDKR-------------LPPELGADSQA-VPLVSVRFRSRTAIPLQDEGAGCTALTGDDDHLLVGISNGRLQL-VSWRGQLRGSSDLW----AGGSDNVSGTSFIPEANAFPIAP-QSPAYETPTASAGGANGHAPDIGIADLEYCRELKLLVAVLADGRVVLCSSGGRGLRPVNEIVPERW-----VGVADAVCAAVGPRAEVLAVGSQRATVELFDL------------------------------------------SQNAA-----YLRTIALFDWGYSVEDTGPVSCIRWTPDNAAFAVG--W-CQRGLAVW-SVSGCRLMCTIRQGSVSHALPPVSPGGFPRTPSKRSAEPMAGGVGGLAWGQYGYQLVAA---------------EAKSASRLVQFPFARM----------------CVTRPVV-------GNAQVFQLMQAEDRVLLVQSD--DEEELKLQHLVVPRNYLAANWPVLHVAANEDGSYLAIAGRRGLTLYNIRAKRWRVFGDIAQEKQVACVGLLWLGR---IVVACLHREATNSFELCLYPRYHLDESSLLCR-LPLP--DRPIAMDTWQD 565          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|1025124336|ref|XP_016463682.1| (PREDICTED: RAB6A-GEF complex partner protein 1-like isoform X1 [Nicotiana tabacum])

HSP 1 Score: 99.7525 bits (247), Expect = 1.948e-17
Identity = 110/421 (26.13%), Postives = 170/421 (40.38%), Query Frame = 0
Query:  246 SHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCL-QGVNTLAFLEQRPW-NPRLL----------SWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            SH S +   VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S     + G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L                A EE  P R                                       AF+    CL +GV+ + ++ Q  +   RLL             H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD+SSLLC     P  T+P+ ++  +D     +R
Sbjct:  207 SHHSLNNSAVVH-LEFSLPLRLLVVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAVCAAVASEQQLLVVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLY---------------AIEEGSPERII-------------------------------------AFSFGKCCLNRGVSGITYVRQVIYGEDRLLVVQSEDTDELKLLHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDHSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|1013946510|gb|KYR00185.1| (hypothetical protein DLAC_03341 [Dictyostelium lacteum])

HSP 1 Score: 100.138 bits (248), Expect = 2.306e-17
Identity = 52/133 (39.10%), Postives = 78/133 (58.65%), Query Frame = 0
Query:  510 LSWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRA-GCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFRSRS 640
            + W H+ +P  Y + N P+  +A S    Q AVAG+RG+ LY+   +RW++FG+ +QE+E+E  G+ W+     +VVA L S     + L Y++ HLDNSSLL    PLPP   P+ ++C  D H  V  + S
Sbjct:  448 IRWKHLQIPSGYLNDNWPIRHIALSRDRNQYAVAGRRGVILYNSLSKRWKMFGDRNQEQEIESHGLVWFKH--TIVVANLNSSTKKFEFLFYTKQHLDNSSLLYQGNPLPPNQIPILIDC-NDVHLAVLTNLS 577          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|1025215917|ref|XP_016480822.1| (PREDICTED: RAB6A-GEF complex partner protein 1-like [Nicotiana tabacum])

HSP 1 Score: 99.7525 bits (247), Expect = 3.294e-17
Identity = 112/436 (25.69%), Postives = 172/436 (39.45%), Query Frame = 0
Query:  219 LGAVLADGRVLLSNLPGPRFSVQTLPASHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            L + L +G     +LP   FS       H S   P VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S       G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L        E  I     K               + R   G +Y R                           + G + L  ++    +   L   H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD SSLLC     P  T+P+ ++  +D     +R
Sbjct:  187 LASSLENGLASGGSLPFSNFS-------HHSLKNPAVVH-LEFSLPLRLLFVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAACAAVASEQQLLAVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLYAIEEGTSERIIAFSFGKC-------------CLNRGVSGTTYVRQ-------------------------VIYGEDRLLVVQSEDTDE--LKLLHLSLPVSYVSQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDQSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|698510913|ref|XP_009800597.1| (PREDICTED: protein RIC1 homolog [Nicotiana sylvestris])

HSP 1 Score: 99.3673 bits (246), Expect = 3.678e-17
Identity = 112/436 (25.69%), Postives = 172/436 (39.45%), Query Frame = 0
Query:  219 LGAVLADGRVLLSNLPGPRFSVQTLPASHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCLQGVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            L + L +G     +LP   FS       H S   P VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S       G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L        E  I     K               + R   G +Y R                           + G + L  ++    +   L   H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD SSLLC     P  T+P+ ++  +D     +R
Sbjct:  187 LASSLENGLASGGSLPFSNFS-------HHSLKNPAVVH-LEFSLPLRLLFVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAACAAVASEQQLLAVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLYAIEEGASERIIAFSFGKC-------------CLNRGVSGTTYVRQ-------------------------VIYGEDRLLVVQSEDTDE--LKLLHLSLPVSYVSQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDQSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|697135757|ref|XP_009621942.1| (PREDICTED: RAB6A-GEF complex partner protein 1-like isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 99.3673 bits (246), Expect = 4.282e-17
Identity = 110/421 (26.13%), Postives = 169/421 (40.14%), Query Frame = 0
Query:  246 SHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCL-QGVNTLAFLEQRPW-NPRLL----------SWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            SH S +   VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S       G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L                A EE  P R                                       AF+    CL +GV+ + ++ Q  +   RLL             H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD+SSLLC     P  T+P+ ++  +D     +R
Sbjct:  207 SHHSLNNSAVVH-LEFSLPLRLLVVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAVCAAVASEQQLLAVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLY---------------AIEEGSPERII-------------------------------------AFSFGKCCLNRGVSGITYVRQVIYGEDRLLVVQSEDTDELKLLHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDHSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
BLAST of EWM21827.1 vs. NCBI_GenBank
Match: gi|1083898203|ref|XP_018632285.1| (PREDICTED: RAB6A-GEF complex partner protein 1-like isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 99.3673 bits (246), Expect = 4.287e-17
Identity = 110/421 (26.13%), Postives = 169/421 (40.14%), Query Frame = 0
Query:  246 SHESRDPPGVVEALAFSPVDAVLAVGYDDGSVAVFRILSTSHGCSPRRA-RSQSPVGASPSRAKPTSSASHPSLPGPAYPAANASEI--SIVFFRRLSLASLGLDTRQVGAVMHVEYSPDGSSLAVAHRWSCSLNVWDTCQWCRPMTTF-------------PRGPETPATRVKAAVSCLLWIQEGYRLLVAHNQVREEEIMVHAAKEEKEPRRDTQAHAEQMRRTREGRSYRRARASACIVRYEMLRWARRAAFAHTALCL-QGVNTLAFLEQRPW-NPRLL----------SWAHVTVPPAY-SVNLPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDMLVYSRHHLDNSSLLCDPVPLPPGTRPLFLECVKDRHDTVFR 637
            SH S +   VV  L FS    +L V + DG + +  +  +  G     + +++  +G+  +     +S       G         +I  S    R +SL   G      GAV  V ++PD S+ AV  +    L VW +   CR M+T               R  E     + +  S + W + GY+L                A EE  P R                                       AF+    CL +GV+ + ++ Q  +   RLL             H+++P +Y S N PV  VA S  G  LA AG  GL LY    ++WR+FG+V QE++++  G+ W G+  VVV     S  G ++L Y R+HLD+SSLLC     P  T+P+ ++  +D     +R
Sbjct:  207 SHHSLNNSAVVH-LEFSLPLRLLVVLFSDGQLVLCSV--SKKGLKQMESIKAEKRLGSGDAVCAAVASEQQLLAVGTRRGVVELYDIAESASLMRSVSLYDWGYSVEDTGAVSCVAWTPDNSAFAVGWKLR-GLTVW-SVSGCRLMSTIRQIGLSSASSPVVKRNQECKYEPMMSGTSLMNWDEYGYKLY---------------AIEEGSPERII-------------------------------------AFSFGKCCLNRGVSGITYVRQVIYGEDRLLVVQSEDTDELKLLHLSLPVSYISQNWPVQHVAASKDGMYLAAAGLHGLILYDIRLKKWRVFGDVTQEQKIQCRGLLWLGK-IVVVCNYDDSSDGYELLFYPRYHLDHSSLLCRK---PLLTKPIVMDVYQDYLLVTYR 566          
The following BLAST results are available for this feature:
BLAST of EWM21827.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102169|gb|EWM21827.1|0.000e+0100.00quinoprotein amine beta chain-like ric1-like guany... [more]
gi|299469732|emb|CBN76586.1|7.584e-3045.06conserved unknown protein [Ectocarpus siliculosus][more]
gi|1025124340|ref|XP_016463683.1|6.725e-1826.13PREDICTED: RAB6A-GEF complex partner protein 1-lik... [more]
gi|971515389|dbj|GAQ82818.1|1.188e-1724.74hypothetical protein KFL_001250140 [Klebsormidium ... [more]
gi|1025124336|ref|XP_016463682.1|1.948e-1726.13PREDICTED: RAB6A-GEF complex partner protein 1-lik... [more]
gi|1013946510|gb|KYR00185.1|2.306e-1739.10hypothetical protein DLAC_03341 [Dictyostelium lac... [more]
gi|1025215917|ref|XP_016480822.1|3.294e-1725.69PREDICTED: RAB6A-GEF complex partner protein 1-lik... [more]
gi|698510913|ref|XP_009800597.1|3.678e-1725.69PREDICTED: protein RIC1 homolog [Nicotiana sylvest... [more]
gi|697135757|ref|XP_009621942.1|4.282e-1726.13PREDICTED: RAB6A-GEF complex partner protein 1-lik... [more]
gi|1083898203|ref|XP_018632285.1|4.287e-1726.13PREDICTED: RAB6A-GEF complex partner protein 1-lik... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8875rna8875Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications