EWM21832.1, cds8834 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|585102174|gb|EWM21832.1| (zip zinc transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 889.026 bits (2296), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 MGGGIITKSLGLLYLLSSAEVFAAARRIDSTAAADLYNVHQGHTHHGGCAQDMVPGEAPAASSTEATSPFARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEARGGQGAPGGGAGAACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTEGWEH 441 MGGGIITKSLGLLYLLSSAEVFAAARRIDSTAAADLYNVHQGHTHHGGCAQDMVPGEAPAASSTEATSPFARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEARGGQGAPGGGAGAACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTEGWEH Sbjct: 1 MGGGIITKSLGLLYLLSSAEVFAAARRIDSTAAADLYNVHQGHTHHGGCAQDMVPGEAPAASSTEATSPFARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEARGGQGAPGGGAGAACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTEGWEH 441
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|219120941|ref|XP_002185702.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582551|gb|ACI65172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 289.656 bits (740), Expect = 3.582e-90 Identity = 167/357 (46.78%), Postives = 223/357 (62.46%), Query Frame = 0 Query: 80 RRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEARGGQGAPGGGAGAACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLT 436 +R CA + MD+KT AA Q RGG G G GVT +G+ L +K+ Q +LT +NV+CWLVP++ K+ EN+ +S+ANAFSGGVFLSLAFGH+IP + GFE +++A PF + LAGYLLIFFVEK+AFD H D HE + D +K + + + +SGRSA++LL ALAVHSI E MALGL+DT LL SI+LHQPAESIALLVAFLKSG+ E Q +YLS+FS +G +GV LG+AV+ +A+ + DS+ +A+ AGTFVYVG TE++ EE+E+ THKW+KF AL++G++ + IT T Sbjct: 97 KRLAEDCCAECSNCMDAKT---------AARQCANMPRGGHAGHGHGVVDHLTHAGVTPYGIPLNAWKVIFQAILTAINVICWLVPLRSKKMSENKLALSLANAFSGGVFLSLAFGHLIPECIHGFEASTYAETTPFMLVLAGYLLIFFVEKVAFDAH---DILHE-------MQGDDHHHHKHPDGHKHKDKKSSGGTEAASS------LSSGRSAVILLGALAVHSILEMMALGLADTFGDCALLTMSISLHQPAESIALLVAFLKSGVPEAQIIQYLSIFSCMGPIGVALGMAVNEFAAPIVDSMMLAVVAGTFVYVGATEVIPEEWEDSTHKWKKFAALMSGIVSIFVITQYT 428
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1210513408|dbj|GAX27805.1| (solute carrier family 39 (zinc transporter), member 1/2/3 [Fistulifera solaris]) HSP 1 Score: 270.781 bits (691), Expect = 2.406e-83 Identity = 170/413 (41.16%), Postives = 229/413 (55.45%), Query Frame = 0 Query: 28 IDSTAAADLYNVHQGHTHHGGCAQDMVPGEAPAASSTEATSPFARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEA--RGGQGAPGGGAGAACGAGGVTT-FGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTE 437 + T A ++ H H G ++ G + A S FA + P SC + C + L A+ + + RGG A A A TT G+ L +K+ Q LLT +NV+CWL+P+K K+ +N+ +SMANAFSGGVFLSLAFGH+IP V GF A+ P+ + LAGYLLIFFVEK+AFD H + HE + + V N++ P SGR A++LL ALAVHS+ E MALGL++ LL SI+LHQPAESIALLVAFLKSG+ E Q +YLS+FS +G +GV LG+AVS +A+ + DS+ +A+ AGTFVYVG TE++ EE+E+G HKW KF AL+ G +G I +T+ Sbjct: 10 VTMTNAVSFWSKLHQHGRHQGYYEEETQGHSKMARR-RGVSIFAEALEIGTCLSPFDPSCW----KRQADCCKDCSHCLDTRAKERVCSFPRGGHMHDHSHAHDAASALIATTPLGLPLNSWKVIFQALLTTMNVLCWLIPLKSKKISQNKFALSMANAFSGGVFLSLAFGHLIPECVHGF--ANLPEETPYLLVLAGYLLIFFVEKVAFDAHEIL---HE-------------MQGEGHHHHHHSHNHQVVNTK--DSKQEVTPAGSGRGAVILLGALAVHSVLEMMALGLANNFGDCALLTLSISLHQPAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVSEYAAPIVDSIMLAVVAGTFVYVGATEVIPEEWEDGQHKWAKFAALMGG---IGSILVITQ 394
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1210528752|dbj|GAX12622.1| (solute carrier family 39 (zinc transporter), member 1/2/3 [Fistulifera solaris]) HSP 1 Score: 271.166 bits (692), Expect = 2.588e-83 Identity = 169/410 (41.22%), Postives = 229/410 (55.85%), Query Frame = 0 Query: 38 NVHQGHTHHGGCAQDMVP--------GEAPAASSTEATSPFARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLME-ARGGQGAPGGGAGAACGAGGVTT-FGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTE 437 +HQ HHG ++ G + A + E + + W R+ + C +D++ A +R+ RGG A A A TT G+ L +K+ Q LLT +NV+CWL+P+K K+ +N+ +SMANAFSGGVFLSLAFGH+IP V GF A+ P+ + LAGYLLIFFVEK+AFD H + HE E + + S+ PA SGR A++LL ALAVHS+ E MALGL++ LL SI+LHQPAESIALLVAFLKSG+ E Q +YLS+FS +G +GV LG+AVS +A+ + DS+ +A+ AGTFVYVG TE++ EE+E+G HKW KF AL+ G +G I +T+ Sbjct: 34 KLHQHGRHHGYYEEETQSHSTMARRRGVSIFAEALEIGTCLSPFDPSCWKRQ--TDCCKDCSHCLDTR-----------AKERVCSFPRGGHMHDHSHAHDAASALIATTPLGLPLNSWKVIFQALLTTMNVLCWLIPLKSKKISQNKFALSMANAFSGGVFLSLAFGHLIPECVHGF--ANLPEETPYLLVLAGYLLIFFVEKVAFDAHEIL---HEMQ-----------GEGHHHHHSHNHQVVNTKESKQEVTPA-----GSGRGAVILLGALAVHSVLEMMALGLANNFGDCALLTLSISLHQPAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVSEYAAPIVDSIMLAVVAGTFVYVGATEVIPEEWEDGHHKWAKFAALMGG---IGSILVITQ 406
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1072233272|gb|OEU18003.1| (Zinc/iron permease [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 256.529 bits (654), Expect = 3.610e-79 Identity = 147/306 (48.04%), Postives = 191/306 (62.42%), Query Frame = 0 Query: 139 FGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETAS------FAHN--VPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLT 436 + + L +K+ Q LT LNVVCWLVP+K K F EN+ +S+ANAFSGGVFLSLAFGH+IP V GF + + N P+ + L+GY+LIFFVEK+AFD H HE HA N + + N T SGRSA++LL ALAVHSI E ALGLSDT + LL SIALHQPAESIALLVAFLKSG+ + Q +LS+FS +G +G LG+ V+ +A + DS+ +A+ AGTFVYVG TE++ EEFE+ +KW+KF AL++G++ + IT T Sbjct: 3 YNIPLNGWKIIFQTFLTILNVVCWLVPLKSKSFGENKLALSLANAFSGGVFLSLAFGHLIPECVHGFSSNTGGLVGGLMSNEATPYMLVLSGYMLIFFVEKVAFDAHGAL---HEMEHAQ--------------DNTNKVKGNNKKNGVAHTHSKDAQQQNSGRSAVILLAALAVHSILEMAALGLSDTFSDSALLTVSIALHQPAESIALLVAFLKSGMPKNQIIVFLSIFSLMGPIGCGLGIVVNEFADPIVDSIMLAVVAGTFVYVGATEVIPEEFEDSDNKWKKFTALMSGIISIFAITQYT 291
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|298712432|emb|CBJ33208.1| (ZIP divalent metal transporters [Ectocarpus siliculosus]) HSP 1 Score: 249.595 bits (636), Expect = 9.741e-77 Identity = 144/285 (50.53%), Postives = 189/285 (66.32%), Query Frame = 0 Query: 157 LNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAGVLIVGGITTLTEGWEH 441 LNV+ L ++I+ F E++ ISMANAFSGGVFLSLAFGHM+PHA GFE + NVP+F+TL+GY+LIFFVEK+AFD H + HE ++ S + + SGRSA++LLLAL VH++ ETMALGLS + AGLLA SI LHQPAES+ALLV+FLKSGL+E+Q +YLS+FS +G G+ LG+A+S +A + D+V VA+ AGTF+YVG TE++AEEFE KW+KF AL AG++I+ +T E EH Sbjct: 3 LNVMKIL--LQIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATLGFEESGLPANVPYFLTLSGYMLIFFVEKVAFDAHNIM---HE--------GDGHGQQQHGGGKAVADGSSVAAVAAGGGEGGVAAGGNSGRSAIILLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFSALTAGIVIIAYVTHWAESLEH 274
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|397615726|gb|EJK63601.1| (hypothetical protein THAOC_15729 [Thalassiosira oceanica]) HSP 1 Score: 222.246 bits (565), Expect = 8.337e-63 Identity = 137/322 (42.55%), Postives = 189/322 (58.70%), Query Frame = 0 Query: 70 FARLAQGIWARRPGSASCAGSPSSMDSKTCGKKGNELHAAAQRLMEARGGQGAPGGGAGAACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVAL 391 F+RL++ + +RP C D + C + LM G GGG A G T G+ L +K+ Q+ LT +NVVCWLVP++ K+ EN+ +S+ANAFSGGVFLSLAFGH+IP + GF + A +P+ + L GYLLIFFVEK+AFD H + H + + AE+++ P + SN SGRSA++LL ALAVHSI E ALGL+DT + LL SIALHQPAESIALLVAFLKSG+ + Q ++LS+FS +G +GV +G+AV+S+A+ + D+ +A+ Sbjct: 232 FSRLSKRL-PKRP--VDCCS-----DCQDCMSSDGMIEYGCDALMANIPRGGHLGGGTTDAIGGVIATPCGLPLNAWKVIFQIFLTTINVVCWLVPLRSKKISENKLGLSLANAFSGGVFLSLAFGHLIPECIHGFGEVNEA--LPYMIVLCGYLLIFFVEKVAFDAHDIL-------HEMEGVGALRDAEESS------PAEEDSSNG------------FSGRSAVILLGALAVHSILEMTALGLADTFGDSALLTLSIALHQPAESIALLVAFLKSGMPKHQIVQFLSIFSCMGPIGVAIGMAVNSFATPIVDATMLAV 518
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1134897033|gb|OMJ94204.1| (hypothetical protein SteCoe_2689 [Stentor coeruleus]) HSP 1 Score: 130.954 bits (328), Expect = 5.247e-31 Identity = 84/281 (29.89%), Postives = 145/281 (51.60%), Query Frame = 0 Query: 164 VPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVP--FFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEK---TALTNGA---VPEKSTVSNSRLVTPPASPP------PTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGF-----LGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAG 425 VP+ K FR N+++IS N F+ G+FL + H++ + E F A ++P + V+L GY LI F+E + F+ + TD H H+H + + A T L N + + + N+ + T P + ++L +AL VHSIFE +A GL DT + +I +H ++AL G+ ++ TR LS+ + F LG+ +G+++S + ++F++++AGTF+Y+GCTEI+AEE + +++ KF + G Sbjct: 25 VPIFSKSFRNNKKLISTGNCFAAGIFLLVGIVHLLRDSQEAFVEA-IGEDLPIGYVVSLGGYTLILFIENVMFNHNHETDEHDHHNHDIKKQSENNEANNENVTKLENNVAIMITTGNAIINNDINTDPDRGDIVSVYHEESDNLPGIILTVALVVHSIFEGIAGGLLDTKTSVISVCVAILIHNVPAAVAL-------GIKLEKATRKLSILLMLMFITSSPLGIAIGISLSDLKFPIIKAIFLSISAGTFLYIGCTEIIAEEMHKREYRFLKFFGFVVG 297
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1134888078|gb|OMJ85455.1| (hypothetical protein SteCoe_13215 [Stentor coeruleus]) HSP 1 Score: 124.405 bits (311), Expect = 1.079e-28 Identity = 81/268 (30.22%), Postives = 133/268 (49.63%), Query Frame = 0 Query: 164 VPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVP--FFVTLAGYLLIFFVEKIAFDTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVS----NSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAG 425 +P+ K F +N+++IS N F+ G+FL + H++ + E FE A +P F V L GY LI F+E I F H H+ + + +K ++ VS N L + ++L AL VHSIFE +A GL DT + +I +H +IAL V K+ +++ + + LF LG+ +G+++S A + ++F+ ++AGTF+Y+GCTEI+AEE + ++K KF + G Sbjct: 25 IPIFSKTFHKNKKLISTGNCFAAGIFLIVGIVHLLRESQESFEEA-LKEEMPVGFVVALGGYTLILFIENILFGGH-----DHKISQEEKEMKKDESGQKIVTERNTGENENIVSVERGNENLECSKKELDDQCNNIPGIILTAALVVHSIFEGIAGGLLDTKSNVISVGIAILIHNIPAAIALGVKLDKA--SKKVSILLMFLFVLSSPLGIAIGISLSDLAFPIIKAIFLGISAGTFIYIGCTEILAEEMHDKSNKLLKFSGFIVG 284
BLAST of EWM21832.1 vs. NCBI_GenBank
Match: gi|1134871876|gb|OMJ70137.1| (hypothetical protein SteCoe_31953 [Stentor coeruleus]) HSP 1 Score: 118.627 bits (296), Expect = 1.271e-26 Identity = 77/266 (28.95%), Postives = 134/266 (50.38%), Query Frame = 0 Query: 164 VPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVP--FFVTLAGYLLIFFVEKIAF--DTHALTDNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVSSWASAVWDSVFVALTAGTFVYVGCTEIVAEEFEEGTHKWRKFGALLAG 425 +P+ K F +N+++IS N F+ G+FL + H++ + E FE A +P F V L GY LI F+E I F H +T + + + +I E + + ++ + + + P ++L AL +HSIFE +A GL DT + +I +H ++AL V K+ + + + + LF LG+ +G+++S A + ++F+ ++AGTF+Y+GCTEI+AEE + +K KF + G Sbjct: 25 IPIFSKSFHKNKKLISTGNCFAAGIFLIVGIVHLLRESQESFEEA-LKEEIPVGFVVALGGYTLILFIENILFGGHDHKITHEEKKDENGQKIVTERNIGENENIESVERDGENQECSIKDMDDHYDNIP------GIILTAALVIHSIFEGIAGGLLDTKSSVISVGIAILIHNIPAAVALGVKLEKA--SRKISIVLMFLFVLSSPLGIAIGISLSDLAFPIIRAIFLGISAGTFIYIGCTEILAEEMHDKNNKILKFSGFIFG 281 The following BLAST results are available for this feature:
BLAST of EWM21832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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