EWM21840.1, cds8833 (CDS) Nannochloropsis gaditana

Overview
NameEWM21840.1
Unique Namecds8833
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:337464..337466 -
Alignment locationKK037250.1:337259..337302 -
Alignment locationKK037250.1:337067..337158 -
Alignment locationKK037250.1:336546..336879 -
Alignment locationKK037250.1:335715..336424 -
Alignment locationKK037250.1:335578..335648 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21840.1
Productudp-glucose 4-epimerase
Orig transcript idgnl|cribi|Naga_100051g17.8879.mrna
GeneUGE
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:337464..337466 -
KK037250.1supercontigKK037250.1:337259..337302 -
KK037250.1supercontigKK037250.1:337067..337158 -
KK037250.1supercontigKK037250.1:336546..336879 -
KK037250.1supercontigKK037250.1:335715..336424 -
KK037250.1supercontigKK037250.1:335578..335648 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003978UDP-glucose 4-epimerase activity
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006012galactose metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR025308Epimerase_C
IPR005886GalE
IPR001509Epimerase_deHydtase_N
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|585102182|gb|EWM21840.1| (udp-glucose 4-epimerase [Nannochloropsis gaditana])

HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
Query:    1 MTLLALKKLLSRQNPLMSRSHGACLMAFMLVFFVQSQAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKAPEPDTTLNICREIEETVGFQGLTMHNILY 417
            MTLLALKKLLSRQNPLMSRSHGACLMAFMLVFFVQSQAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKAPEPDTTLNICREIEETVGFQGLTMHNILY
Sbjct:    1 MTLLALKKLLSRQNPLMSRSHGACLMAFMLVFFVQSQAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKAPEPDTTLNICREIEETVGFQGLTMHNILY 417          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|1189383967|gb|OSX71241.1| (hypothetical protein BU14_0574s0012 [Porphyra umbilicalis])

HSP 1 Score: 471.855 bits (1213), Expect = 2.472e-163
Identity = 223/349 (63.90%), Postives = 274/349 (78.51%), Query Frame = 0
Query:   40 AGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKA 388
            A  +LVTGGAGYIGSHT  EL+  G   VVVDNL NS E+S++RV E+TG  S  + FR++DLLN E L+ +FKE++F ACIHFAGLKAVGESV  PL+YYHNN+ GTL LL +++KY CKN VFSSSATVYG  +++P+ ED  + ATNPYGRTKLFIEE LRD   A ++W+ILILRYFNP+GAHESGRIGEDP GIPNNLMP++AQV VGRRE LS+FG DYPT DGTGVRDYIHVVDLA+GHVAA++++ + +      +GC  VNLGTG+G SVL+++  M  A G+E+P KM  RR GDV+ LY DPAFA  FL W+A  GV++MC+ TW+WQS NP GY+ A
Sbjct:    3 AKTVLVTGGAGYIGSHTVLELVNEGFTAVVVDNLDNSSEESLKRVSELTG-KSDQIVFRHVDLLNEEALEAVFKEFTFSACIHFAGLKAVGESVKLPLKYYHNNLTGTLILLNLLDKYGCKNFVFSSSATVYGLVKEMPVLEDAEIGATNPYGRTKLFIEEFLRDLSRAQEEWNILILRYFNPVGAHESGRIGEDPSGIPNNLMPYIAQVAVGRREHLSIFGDDYPTKDGTGVRDYIHVVDLAKGHVAALEKLTDEK------VGCKSVNLGTGKGYSVLDMLNGMSKACGRELPYKMAPRREGDVSVLYADPAFAKSFLGWEAKLGVEEMCESTWKWQSNNPNGYKTA 344          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|544209282|ref|XP_005535044.1| (UDP-glucose 4-epimerase [Cyanidioschyzon merolae strain 10D] >gi|449015356|dbj|BAM78758.1| UDP-glucose 4-epimerase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 470.7 bits (1210), Expect = 9.163e-163
Identity = 223/349 (63.90%), Postives = 273/349 (78.22%), Query Frame = 0
Query:   43 ILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDD-LFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTA---DKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRK 387
            ILVTGGAGYIGSHT  ELL++G  +VV+DNL NS E+++ RV+E+TG +   L+F+ +DL +   LD  + K     ACIHFAGLKAVGESV QPLRYY NN++GTLNLL+ +N++ C+  VFSSSATVYG  EK+PI+E   L ATNPYG+TKLFIEE LRD H +    +DW ILILRYFNP+GAH SGRIGEDP+GIPNNLMPF+AQV VGRRE LSV+G+DYPTPDGTGVRDYIHVVDLA+GHVAA++++ +  +    ++GCV VNLGTGRG SVLE+VKA   ASG+ IP K+  RRPGD A +Y DP+FA  FL W+A  G+ +MC  TW+WQS NP GYRK
Sbjct:    7 ILVTGGAGYIGSHTVVELLESGYDVVVLDNLSNSSEEALRRVRELTGASEQRLQFQAVDLTDGVALDAAVAKSAPISACIHFAGLKAVGESVEQPLRYYRNNLIGTLNLLQSLNRHGCRRFVFSSSATVYGQAEKVPISETSPLGATNPYGKTKLFIEEFLRDLHASPHGGRDWHILILRYFNPVGAHASGRIGEDPVGIPNNLMPFIAQVAVGRREFLSVYGNDYPTPDGTGVRDYIHVVDLAKGHVAALEKLEKDEA----NVGCVAVNLGTGRGYSVLEMVKAFEKASGRRIPYKIVARRPGDAAVVYADPSFAKTFLGWEAKLGIDEMCASTWKWQSENPHGYRK 351          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|460929865|gb|EMI53947.1| (UDP-glucose 4-epimerase [Rhodopirellula sallentina SM41])

HSP 1 Score: 462.225 bits (1188), Expect = 3.842e-159
Identity = 224/347 (64.55%), Postives = 262/347 (75.50%), Query Frame = 0
Query:   39 FAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGY 385
            F   ILVTGGAGYIGSHT  ELL  G  ++VVDNL NS ++S+ RV+E+TG     +EF  +DLL+ + LD +F     D+ IHFAGLKAVGESV  PLRYYHNNI G+LNL EVM K+  KN+VFSSSATVYGDP  +PITED  L ATNPYGRTKL +EE+ RD   +D  W+I +LRYFNP+GAH SGRIGEDP GIPNNLMPF+AQV VGRR  LSVFG+DYPTPDGTGVRDYIHVVDLA GHV AVD++         + G V  NLGTG G SVLE+V +   ASGK++PIK+ DRRPGDVA+ Y DP FA + L W+ATR V DMC DTWRWQS+NP G+
Sbjct:   28 FPMKILVTGGAGYIGSHTVLELLNEGHEVIVVDNLDNSSKESLRRVEELTG---KKVEFHKVDLLDFDALDKVFSGRGVDSVIHFAGLKAVGESVQIPLRYYHNNITGSLNLCEVMIKHDVKNLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLMLEEIFRDLSVSDNSWNIALLRYFNPVGAHSSGRIGEDPSGIPNNLMPFVAQVAVGRRPELSVFGNDYPTPDGTGVRDYIHVVDLAVGHVRAVDKLTS-------NPGVVTYNLGTGNGCSVLEMVASFEKASGKKVPIKIVDRRPGDVASCYADPTFAEKELGWKATRTVDDMCADTWRWQSQNPSGF 364          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|763474252|ref|WP_044303185.1| (UDP-glucose 4-epimerase [Rhodopirellula sallentina])

HSP 1 Score: 460.299 bits (1183), Expect = 5.818e-159
Identity = 223/343 (65.01%), Postives = 261/343 (76.09%), Query Frame = 0
Query:   43 ILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGY 385
            ILVTGGAGYIGSHT  ELL  G  ++VVDNL NS ++S+ RV+E+TG     +EF  +DLL+ + LD +F     D+ IHFAGLKAVGESV  PLRYYHNNI G+LNL EVM K+  KN+VFSSSATVYGDP  +PITED  L ATNPYGRTKL +EE+ RD   +D  W+I +LRYFNP+GAH SGRIGEDP GIPNNLMPF+AQV VGRR  LSVFG+DYPTPDGTGVRDYIHVVDLA GHV AVD++         + G V  NLGTG G SVLE+V +   ASGK++PIK+ DRRPGDVA+ Y DP FA + L W+ATR V DMC DTWRWQS+NP G+
Sbjct:    3 ILVTGGAGYIGSHTVLELLNEGHEVIVVDNLDNSSKESLRRVEELTG---KKVEFHKVDLLDFDALDKVFSGRGVDSVIHFAGLKAVGESVQIPLRYYHNNITGSLNLCEVMIKHDVKNLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLMLEEIFRDLSVSDNSWNIALLRYFNPVGAHSSGRIGEDPSGIPNNLMPFVAQVAVGRRPELSVFGNDYPTPDGTGVRDYIHVVDLAVGHVRAVDKLT-------SNPGVVTYNLGTGNGCSVLEMVASFEKASGKKVPIKIVDRRPGDVASCYADPTFAEKELGWKATRTVDDMCADTWRWQSQNPSGF 335          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|298706642|emb|CBJ29580.1| (galactose-4-epimerase, UDP [Ectocarpus siliculosus])

HSP 1 Score: 459.914 bits (1182), Expect = 3.164e-158
Identity = 222/354 (62.71%), Postives = 268/354 (75.71%), Query Frame = 0
Query:   38 AFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYK-CKNMVFSSSATVYGDPEKLPITEDQRLQA--TNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIK--MTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYR 386
            AFA  +LVTGGAGYIGSHTC EL+KAG ++VVVD+L N+ E+S+ RV+E+T C    L FR ++LL+   L+ +F +Y FD+C+HFAGLKAVGESV++PL YY NNI GTLNL+E M K   C+ +VFSSSATVYG+P+KLP+ E   +    TNPYGRTK  IEE+LRD   +D  W IL+LRYFNPIGAHESGR+GEDP GIPNNLMPF+AQVCVGRRE LSVFG DY TPDGTGVRDYIHV+DLAEGHVAAV ++ E+        GC  VNLGTG G SV+++VK M +A G  IP K  +  RR GDV A+Y DP+ A   L W A RG+KDMC DTWRWQS +P GY+
Sbjct:   31 AFAARVLVTGGAGYIGSHTCVELIKAGEKVVVVDDLSNAVEESLNRVRELTKCDDDQLVFRKVNLLDQPALESVFNDYEFDSCVHFAGLKAVGESVAKPLLYYRNNIEGTLNLVECMQKQPGCRKLVFSSSATVYGEPDKLPLDESSSVGVGITNPYGRTKYMIEEILRDMSKSDPSWDILLLRYFNPIGAHESGRMGEDPEGIPNNLMPFVAQVCVGRREFLSVFGDDYGTPDGTGVRDYIHVMDLAEGHVAAVRKLRES------CTGCAAVNLGTGSGYSVMDVVKGMEEACGNPIPYKEQVMPRRAGDVEAMYADPSLAKSMLGWTAKRGLKDMCTDTWRWQSAHPNGYK 378          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|1210516010|dbj|GAX25095.1| (UDP-glucose 4-epimerase [Fistulifera solaris])

HSP 1 Score: 458.759 bits (1179), Expect = 2.031e-157
Identity = 228/377 (60.48%), Postives = 281/377 (74.54%), Query Frame = 0
Query:   24 CLMAFMLVFFVQSQAFAG---HILVTGGAGYIGSHTCCELLK---AGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEY-SFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKAPEPDT 393
            CL+ F+   F  + A A     +LVTGGAGYIGSHTC ELL+   A  R+VVVDNL NS ++S+ RV+E+       L FR  D+ +   L  +F+E+    +CIHFAGLKAVGESV++PL YY  NI GT++LLE++ + + +  VFSSSATVYG+PE LP+ E  RLQATNPYGRTKLFIEE+LRD H AD DW +LILRYFNPIGAH SGRIGEDP GIPNNLMP++AQVCVGRRE L+VFG+DY TPDGTGVRDYIHVVDLA+GHVAA+D++       G+ +GC  VNLGTG+GVSVL+LV+ M +A+GK +P ++  RRPGDVA +Y D + A  FL W+A  GVK+MC DTWRWQS NP GY+   E  T
Sbjct:   14 CLLYFIF-GFSWAMALATPQRTVLVTGGAGYIGSHTCLELLQDKDAQYRVVVVDNLENSSKESLRRVQELVQTDPNRLVFRQCDIRDKACLVAVFEEFPQISSCIHFAGLKAVGESVAKPLAYYDANIGGTVHLLELLQERQVRKFVFSSSATVYGEPEMLPLVETARLQATNPYGRTKLFIEEILRDLHAADPDWQVLILRYFNPIGAHPSGRIGEDPQGIPNNLMPYIAQVCVGRREKLTVFGNDYDTPDGTGVRDYIHVVDLAKGHVAALDKLYRVDDNAGEPVGCRAVNLGTGQGVSVLQLVQGMTEATGKPVPYEVGPRRPGDVATVYADASVAETFLGWKAELGVKEMCQDTWRWQSTNPNGYQVQEETIT 389          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|496394674|ref|WP_009103664.1| (UDP-glucose 4-epimerase GalE [Rhodopirellula sp. SWK7] >gi|460843567|gb|EMI41178.1| UDP-glucose 4-epimerase [Rhodopirellula sp. SWK7])

HSP 1 Score: 456.062 bits (1172), Expect = 3.219e-157
Identity = 223/343 (65.01%), Postives = 258/343 (75.22%), Query Frame = 0
Query:   43 ILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGY 385
            ILVTGGAGYIGSHT  ELL  G  +VVVDNL NS E+S+ RV E+TG ++   EF  +DLL+ E LD +F     D+ IHFAGLKAVGESV  PLRYY NNI G+LNL EVM K+  KN+VFSSSATVYGDP  +PITED  L ATNPYGRTKL +EE+ RD   +D  W+I +LRYFNP+GAH SGRIGEDP GIPNNLMPF+AQV VGRR  LSVFG+DYPT DGTGVRDYIHVVDLA GHV AVD++         + G V  NLGTG G SVLE+V +   ASGK++P K+ +RRPGDVAA Y DP +A + L W+ATR V DMC DTWRWQS+NP GY
Sbjct:    3 ILVTGGAGYIGSHTVLELLNEGHEVVVVDNLDNSSEESLRRVAELTGKSA---EFHKIDLLDEEALDKVFSGAGIDSVIHFAGLKAVGESVQIPLRYYQNNITGSLNLCEVMIKHNVKNLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLMLEEIFRDLSVSDSSWNIALLRYFNPVGAHSSGRIGEDPSGIPNNLMPFVAQVAVGRRPELSVFGNDYPTVDGTGVRDYIHVVDLAVGHVRAVDKLT-------SNPGVVTYNLGTGNGCSVLEMVASFEKASGKKVPTKIVERRPGDVAACYADPTYAEKELGWKATRTVDDMCVDTWRWQSQNPTGY 335          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|1054602748|ref|WP_066370998.1| (UDP-glucose 4-epimerase [Bacillus fumarioli])

HSP 1 Score: 453.366 bits (1165), Expect = 3.920e-156
Identity = 222/344 (64.53%), Postives = 261/344 (75.87%), Query Frame = 0
Query:   43 ILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYR 386
            ILVTGGAGYIGSHTC ELL AG  I+V+DN  NS  ++V+R+KEITG      EF   DLLN E LD +F  +S +A IHFAGLKAVGESV+ PLRYYHNNI GTL L EVM KY  KN+VFSSSATVYG PE++PI+ED  L+ATNPYGRTKL IEE+LRD + +D+DWSI +LRYFNPIGAHESGRIGEDP GIPNNLMP++ QV VG+   L VFGSDYPT DGTGVRDYIHVVDLA GH+ AV+++M ++       G    NLGTG G SVLE+VKA   ASG +IP K+ +RRPGDVA  Y +P+ A   L W + RG++DMC D+WRWQ  NP GY 
Sbjct:    3 ILVTGGAGYIGSHTCVELLNAGYEIIVLDNFSNSKLEAVKRIKEITG---KDFEFYEADLLNHEELDKVFANHSIEAVIHFAGLKAVGESVAIPLRYYHNNITGTLILCEVMKKYNVKNIVFSSSATVYGMPEQVPISEDFPLRATNPYGRTKLMIEEILRDVYISDQDWSIALLRYFNPIGAHESGRIGEDPNGIPNNLMPYITQVAVGKLPELQVFGSDYPTVDGTGVRDYIHVVDLALGHLKAVEKVMASK-------GVEAYNLGTGTGYSVLEIVKAFEAASGVKIPYKIVERRPGDVAICYAEPSKAKIELGWTSQRGIEDMCRDSWRWQKNNPHGYE 336          
BLAST of EWM21840.1 vs. NCBI_GenBank
Match: gi|1210522494|dbj|GAX18507.1| (UDP-glucose 4-epimerase [Fistulifera solaris])

HSP 1 Score: 454.521 bits (1168), Expect = 7.444e-156
Identity = 230/375 (61.33%), Postives = 279/375 (74.40%), Query Frame = 0
Query:   24 CLMAFMLVF-FVQSQAFAG---HILVTGGAGYIGSHTCCELLK---AGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEY-SFDACIHFAGLKAVGESVSQPLRYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQATNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARSECGKSLGCVPVNLGTGRGVSVLELVKAMRDASGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGYRKAPE 390
            CL  F L+F F  + A A     +LVTGGAGYIGSHTC ELL+   A  R+VVVDNL NS ++S+ RV+E+       L FR  D+ +   L  +F+E+    +CIHFAGLKAVGESV++PL YY +NI GT+NLLE++ + + +  VFSSSATVYG+PE LP+ E  RLQATNPYGRTKLFIEE+LRD H AD DW ILILRYFNPIGAH SGRIGEDP GIPNNLMP++AQVCVGRRE L+VFG+DY TPDGTGVRDYIHVVDLA+GHVAA+D++        + +GC  VNLGTG GVSVL+LV+ M +A+GK +P  +  RRPGDVA +Y D + A  FL W+A  GVK+MC DTWRWQS NP GY+   E
Sbjct:   14 CL--FYLIFGFSWAMALATPQRTVLVTGGAGYIGSHTCLELLQDKDAQYRVVVVDNLENSSKESLRRVQELVQTDPERLVFRQCDIRDKACLTSVFEEFPQISSCIHFAGLKAVGESVAKPLAYYDSNIGGTVNLLELLQERQVRKFVFSSSATVYGEPEMLPLVETARLQATNPYGRTKLFIEEILRDVHAADPDWQILILRYFNPIGAHPSGRIGEDPQGIPNNLMPYIAQVCVGRREKLTVFGNDYDTPDGTGVRDYIHVVDLAKGHVAALDKLYR------EPVGCKAVNLGTGHGVSVLQLVQGMAEATGKPVPYDVGPRRPGDVATVYADASVAETFLGWKAELGVKEMCQDTWRWQSTNPNGYQVQEE 380          
The following BLAST results are available for this feature:
BLAST of EWM21840.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102182|gb|EWM21840.1|0.000e+0100.00udp-glucose 4-epimerase [Nannochloropsis gaditana][more]
gi|1189383967|gb|OSX71241.1|2.472e-16363.90hypothetical protein BU14_0574s0012 [Porphyra umbi... [more]
gi|544209282|ref|XP_005535044.1|9.163e-16363.90UDP-glucose 4-epimerase [Cyanidioschyzon merolae s... [more]
gi|460929865|gb|EMI53947.1|3.842e-15964.55UDP-glucose 4-epimerase [Rhodopirellula sallentina... [more]
gi|763474252|ref|WP_044303185.1|5.818e-15965.01UDP-glucose 4-epimerase [Rhodopirellula sallentina... [more]
gi|298706642|emb|CBJ29580.1|3.164e-15862.71galactose-4-epimerase, UDP [Ectocarpus siliculosus... [more]
gi|1210516010|dbj|GAX25095.1|2.031e-15760.48UDP-glucose 4-epimerase [Fistulifera solaris][more]
gi|496394674|ref|WP_009103664.1|3.219e-15765.01UDP-glucose 4-epimerase GalE [Rhodopirellula sp. S... [more]
gi|1054602748|ref|WP_066370998.1|3.920e-15664.53UDP-glucose 4-epimerase [Bacillus fumarioli][more]
gi|1210522494|dbj|GAX18507.1|7.444e-15661.33UDP-glucose 4-epimerase [Fistulifera solaris][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8863rna8863Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications