EWM21857.1, cds8818 (CDS) Nannochloropsis gaditana

Overview
NameEWM21857.1
Unique Namecds8818
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:300312..300707 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21857.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100169g19.548.mrna
GbkeyCDS
End range.
End range300707
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:300312..300707 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21857.1 vs. NCBI_GenBank
Match: gi|585102200|gb|EWM21857.1| (hypothetical protein Naga_100169g19, partial [Nannochloropsis gaditana])

HSP 1 Score: 251.521 bits (641), Expect = 1.968e-84
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 YGDYYSSAGYSQHPHYGSYPSQHGSAYSDYPPSGVAGGLLLLLRAWGVRPERQRPCGGGSASALHGRGGVWRLQWEPRLALSGPRRAFIGLCSGWGGRIRATPRPACAPGASRAESPPLLGMGGGGEGISR 131
            YGDYYSSAGYSQHPHYGSYPSQHGSAYSDYPPSGVAGGLLLLLRAWGVRPERQRPCGGGSASALHGRGGVWRLQWEPRLALSGPRRAFIGLCSGWGGRIRATPRPACAPGASRAESPPLLGMGGGGEGISR
Sbjct:    1 YGDYYSSAGYSQHPHYGSYPSQHGSAYSDYPPSGVAGGLLLLLRAWGVRPERQRPCGGGSASALHGRGGVWRLQWEPRLALSGPRRAFIGLCSGWGGRIRATPRPACAPGASRAESPPLLGMGGGGEGISR 131
The following BLAST results are available for this feature:
BLAST of EWM21857.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102200|gb|EWM21857.1|1.968e-84100.00hypothetical protein Naga_100169g19, partial [Nann... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8848rna8848Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications