EWM21879.1, cds8799 (CDS) Nannochloropsis gaditana

Overview
NameEWM21879.1
Unique Namecds8799
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:262747..265737 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21879.1
Productregulator of nonsense
Orig transcript idgnl|cribi|Naga_100159g2.6557.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:262747..265737 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|585102223|gb|EWM21879.1| (regulator of nonsense [Nannochloropsis gaditana])

HSP 1 Score: 2024.21 bits (5243), Expect = 0.000e+0
Identity = 996/996 (100.00%), Postives = 996/996 (100.00%), Query Frame = 0
Query:    1 MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD 996
            MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD
Sbjct:    1 MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD 996          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|873230613|emb|CEM10847.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 390.193 bits (1001), Expect = 4.768e-112
Identity = 224/522 (42.91%), Postives = 303/522 (58.05%), Query Frame = 0
Query:  513 LNESQERALRMALSRKLSLIQGPPGTGKTRTACHLV-SIAVKLGQRRDAG---------------------KVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH------------------------QSVTTFKKKL--EAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVM 986
            +++SQE A+R +L+++++LIQGPPGTGKTRT+C L+ SI   +   R  G                     KVLA AFSNVAADNLLEG +++G+ AVR GRA  V P L+N+T+DA++ QH                        Q  T+ + K   +A      R ++ A+ D++ AE  A   I+  ADVVV++ + A    + +   V                P   +   P   VKF TV+IDEASQ TEPA  VP+ +GCEQL+LVGD  QLP T+ S +A   GL +SLF+RL +AG+ P +L  QYRMHP IA FPS  FY   L S P    +RP P GFPWP    PVAFV+V      +   P    +  G+ TS  NR+EA  L++VL  ++   ++   D+G+VTPY+AQV+ + +  +  L       +E++SVD YQGREKE+I+ SAVRSN  G VGFL DWRRLNVA+TRA+RGLVV GDPRTL  DPH+ +Y++W    G V+
Sbjct:  649 VDQSQEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKAARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKAASQAKLDEANRLLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQV----------------PEWDTQRVP---VKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIP-KPEERPTPGGFPWPDDVKPVAFVSVMEPAGYSESRPDETTKWGGSTTSKYNREEALCLVKVLKELVSHGDVSYTDIGVVTPYAAQVRFLQDTLRTELGRDTAALIEVKSVDGYQGREKEVILFSAVRSNPTGSVGFLRDWRRLNVAVTRARRGLVVFGDPRTLTADPHYDSYIQWCKHEGLVV 1150          

HSP 2 Score: 93.2041 bits (230), Expect = 1.586e-15
Identity = 72/282 (25.53%), Postives = 119/282 (42.20%), Query Frame = 0
Query:  164 ATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRG------------------------------------------DPTGGER--------------FRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAE 389
            A +  L  YS HF  LLEEE++ ++   ++RLR W  +RL  EG+ + G+ A+   R+ KE I+R  LP       RR      G         +   Q    +          R P L +H+   GD +++T  +QNPL +    EG+V E+   ++D+ V ++PP  +W++                                           D T G+               +RLD++ NR+S  RM+ A+ ++T       ++P++RD LV SF +
Sbjct:  318 AAYPHLVDYSDHFSSLLEEEVLVKDEMAVERLRNWTNARLESEGILIRGLEAKHTHRILKEKIVRLQLPIE---TVRRNSTDAGGDKDGDVDGEEGDGQQVESRL-------VYRRPYLPFHQFSRGDAVTLTLGEQNPLDAMDRYEGVVHEKHPKYIDIAVMDLPPE-LWKKNRIPNKQQQQQDPDDQDPAERKLFRPADADTADTVEEDELGQDDDTQGQEDIDDNNNNNNRTVSWRLDMFENRVSHDRMITALAELTAPNVSDKMAPDLRDALVYSFIQ 588          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200455913|gb|OUV71610.1| (hypothetical protein CBC92_03865 [Euryarchaeota archaeon TMED132])

HSP 1 Score: 369.392 bits (947), Expect = 1.387e-111
Identity = 215/493 (43.61%), Postives = 289/493 (58.62%), Query Frame = 0
Query:  510 RFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH--QSVTTF--------KKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL---AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985
            R  LN+SQ+ A+ +A+ R+L+LIQGPPGTGKT TA HL+      GQ    G ++A A SNVA DNLLEG L LG+ AVR+GR   VR  LR+ TLDALL  H  Q    F        +K L  +RG       +D++   +++   E     S+L  A+VV +T +G+ +++          LG R                      K+P V+IDEA+QA+EP+ LVP+ +GC QL+LVGDH QLPPT+ S RA   GLG SLF RL    I   +LT QYRMHP I +FPS RFY   L+    +  +RP P G  WP    PVAF+ V G EE            +   +S  N  EA  ++ V+ G+L+  +IQ+ D+GI+TPY+ QV+ +++L   A  R        LEI+SVD YQGREKE+IV S VR+N++G+VGFL D RRLNVA+TRAKRGL+V+G   TLR +P W ++L W  + GC+
Sbjct:  220 RDSLNDSQQNAVEVAMQRRLTLIQGPPGTGKTHTAVHLLKELADKGQ----GAIMASAESNVAVDNLLEGLLDLGVKAVRIGRPVKVRENLRDATLDALLENHPLQEELNFIRDENDELRKGLSKLRGKEKGLAHKDIKHNFKEMRRIESEMTASVLDEAEVVCATTIGSGHQI----------LGNR----------------------KYPIVLIDEATQASEPSALVPINRGCRQLILVGDHKQLPPTVISDRAESGGLGQSLFERLHKCEIPAQMLTTQYRMHPSIREFPSARFYDNQLED-GCSKEQRPAPAGLLWPDWDHPVAFIPVEGSEE-----------LDEEGSSRSNFSEAAKVLSVIDGLLQIGDIQTTDIGIITPYNGQVRVLSDLFEQAGGRETGEKYSGLEIKSVDGYQGREKEVIVFSTVRANENGEVGFLKDKRRLNVALTRAKRGLIVIGHLSTLRQEPTWKSWLDWVEERGCL 664          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|545703980|ref|XP_005704314.1| (endonuclease [Galdieria sulphuraria] >gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria])

HSP 1 Score: 350.903 bits (899), Expect = 3.504e-104
Identity = 191/496 (38.51%), Postives = 277/496 (55.85%), Query Frame = 0
Query:  514 NESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVT----TFKKKLEAVR--------GSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNI---------QSM-DVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMT 987
            NESQ+ A + AL R+L+LIQGPPGTGKT+T   +++  V+LG+      +LA A++++A DN+L+   R  + A+R+G+ A +   L  ++LD+LL +   +       KK +E +         G   RD   +   L+  E++A   IL    +V+STCVGA  E+                                L+ + F  V IDEA+Q+ EP  L+P+ +GCEQL+L GDHYQLPPTI +  AA  GL VSLF RL  +G+EP LL  QYRMHP IA FPSQ FY GLL S P     +   + FPWP+P  P+AF+ V G+E  T              TSY N +E+ V++E +  ++              QS   +GI+TPY+ Q++ + +             +E+++VD +QGREK++I++S VRSN    +GFL DWRRLNVAITR++ GL+V+G+  TL  + HW  +L+W   HGC+ T
Sbjct:  266 NESQQTAWKNALERRLTLIQGPPGTGKTKTLAKILASLVQLGR----TPILASAYTHIATDNILDELERYNIPAIRIGKPANIHRNLWKYSLDSLLERDTRIIEKRENLKKAMERLAQPKRGKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEI--------------------------------LKNISFQVVAIDEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVRSGVEPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCT---QSISNYFPWPNPQTPIAFIPVLGEEWVTEQG-----------TSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNVAITRSRSGLIVIGNANTLSRNDHWKRWLEWISHHGCIYT 711          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200378823|gb|OUU97432.1| (hypothetical protein CBC45_08625 [Euryarchaeota archaeon TMED85])

HSP 1 Score: 348.977 bits (894), Expect = 4.952e-104
Identity = 208/499 (41.68%), Postives = 286/499 (57.31%), Query Frame = 0
Query:  512 KLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGK-VLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAV------------------RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDE---EDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGD---LEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985
            +LNE Q +A+  A+ ++LSLIQGPPGTGKT TA  ++      G  +++   +LAVA SNVA DNLLEG L L +NAVR+G+   VR  LR  T+DA +  H+     +K L+ +                  +G   RD++   +D    E      IL NADV+ +TC+G+ + +          L GR                      +FP V+IDEA+QATEPATLVP+ +GC+QLVLVGDH QLPPT+ S RA + GL +SLF RL   G+  ++L  QYRMHP IA+FPS + Y GLLK+      KRP P G  WP    P+AFV V G E    D H              S  N  EA  ++++   +L+  +I   ++GI++PY+ QV+ + +L ++     + G    +E++SVD YQGREKE+I++SAVRSN  G VGFL D RRLNVA+TRAKRGLVV+GDP+TLR+   W  +L W  +   +
Sbjct:  211 QLNEVQNQAVSKAMEQRLSLIQGPPGTGKTYTAVRILE-----GWAKNSNTPILAVAESNVAVDNLLEGLLNLRVNAVRLGQPVKVRESLREATIDAKMEVHR----LRKDLDVILELNEDLSRRISGMKGKDKGLAHRDLKKGWKDARRIEQQMKDDILENADVICATCIGSGHIL----------LDGR----------------------RFPRVLIDEATQATEPATLVPIVRGCKQLVLVGDHKQLPPTVISSRAEKMGLNISLFERLIQLGVNSTMLLEQYRMHPCIAEFPSLQSYEGLLKNAISED-KRPTPVGLIWPDFENPIAFVPVEGGEIVSPDGH--------------SKANPTEAGWVLKMAESILQGEDIFPHEIGIISPYNGQVRAIRDLMESSGGMEDGGKWEGIEVKSVDGYQGREKEVIILSAVRSNPEGNVGFLDDSRRLNVALTRAKRGLVVIGDPKTLRNQRDWDFWLTWVEQKNLI 653          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200478866|gb|OUV93894.1| (hypothetical protein CBD01_07290 [Euryarchaeota archaeon TMED141])

HSP 1 Score: 353.214 bits (905), Expect = 2.622e-103
Identity = 210/492 (42.68%), Postives = 284/492 (57.72%), Query Frame = 0
Query:  513 LNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAV----RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL-----AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985
            LN SQ  A+  AL+++L+LIQGPPGTGKT TA H+++     G+    G +LA A SNVA DNLLEG L  G+NAVR+G+   VR  LR  TLDA L  H          +   T K+ L  +    RG   +D+   +R+++  E      +L +A+VV +T VG+ + +          LG R                      +FP V++DEA+QA+EP+++VP+ +GC  LVLVGDH QLPPT+ S RAA  GLG SLF RL   G+   +LT QYRMHP I +FP  RFY G L+     + +RP P GF WP    PVAFV V G+EE            +   +S  NR +A     ++  +L   +++  DVG+VTPY+AQV+ +T+L            F+   LE++SVD YQGREKE+IV   VRSN  G++GFL D RRLNVAITRA+RGLV++G P+TLR D  W A+L WA + G +
Sbjct:  436 LNASQSEAVEAALNQRLTLIQGPPGTGKTHTAVHVLATMAAQGR----GPILATAESNVAVDNLLEGLLDAGVNAVRIGQPVKVRASLREATLDARLEHHPLQEDLAALREEHATLKRGLSGLKGKERGMAHKDLSMQRREMQRLEQQMVDGLLDDAEVVCATTVGSGHRI----------LGSR----------------------RFPIVLVDEATQASEPSSMVPIVRGCRHLVLVGDHRQLPPTVISDRAAEGGLGRSLFERLIDLGLSTHMLTTQYRMHPSIREFPGARFYDGRLEDGCDRS-ERPPPAGFLWPDWDRPVAFVPVDGEEE-----------LDAEGSSKANRDQAAATFSIVRDLLAAGDLEGHDVGVVTPYTAQVRMMTDLFDEGGGLDEGGRFH--GLEVRSVDGYQGREKEVIVFCTVRSNPRGEIGFLADRRRLNVAITRARRGLVMVGHPQTLRRDGTWRAWLDWAEELGLM 877          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|663514497|gb|AIF05006.1| (regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_178_D06])

HSP 1 Score: 346.28 bits (887), Expect = 1.610e-102
Identity = 207/493 (41.99%), Postives = 281/493 (57.00%), Query Frame = 0
Query:  512 KLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH---QSV-------TTFKKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQ-----------ARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWA 979
            +LNESQ  A+  AL+ +L+L+QGPPGTGKT TA  ++    + G     G +LA A SNVA DNLLEG L LG+ AVR+G+   VR  LR  T+ A +  H   + V          +++L +++G       RD++   RD+   E      I+  A+VV +TC+G  + +                                L   +FP ++IDE++QATEPAT VP+ + C +LVLVGDH QLPPT+ S RA   GL  SLF RL   GIEP LL  QYRMHP IA+FPS R+Y  LL++    A +RP P GF WP    PVAF+ V G EE              +  S +N  EA  +++V+  +L   ++Q  D+G+V+PY+ QV+ + ++             A+ R      LE++SVD YQGREKE+IV+S VR+N+ G+VGFL D RRLNVAITRAKRGL+V+G P TLRHD  W A+L WA
Sbjct:  251 QLNESQFAAVEAALAHRLTLVQGPPGTGKTHTAVRILKGWAEEG----TGPILACADSNVAVDNLLEGLLALGVRAVRIGQPVKVRSNLREATVRARMEAHPLQEEVRELLGLQEDLQRRLPSLKGKDKGLGHRDLKNGWRDIRALENEMIEDIIDTAEVVCATCIGVGHPM--------------------------------LDKRRFPNLLIDESTQATEPATWVPIMRACRRLVLVGDHRQLPPTVISKRAEEDGLDRSLFERLVDLGIEPHLLNTQYRMHPTIAEFPSSRYYDNLLENGV-TAEQRPPPAGFLWPDWERPVAFIPVDGAEELAE-----------DGASRLNVAEAGWVVKVVQDLLAPGDLQPNDIGVVSPYNGQVRLLADMLHEAGGLDEDDESAKFR-----GLEVRSVDGYQGREKEVIVLSTVRANETGEVGFLRDHRRLNVAITRAKRGLIVIGSPNTLRHDSDWEAWLDWA 690          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|374723515|gb|EHR75595.1| (putative DNA helicase [uncultured marine group II euryarchaeote])

HSP 1 Score: 342.043 bits (876), Expect = 1.712e-101
Identity = 210/489 (42.94%), Postives = 281/489 (57.46%), Query Frame = 0
Query:  508 VARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL---AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWA 979
            +A   LN SQ  A+  AL R+L+LIQGPPGTGKT TA HL+S  V +G+    G +LA A SNVA DNLLEG L LG+ AVR+GR   VR  LR  TLDA + +H          +     ++ L  ++G       +DV    +++   E     S+L  A+V+ +T +G  +++                                LR  +FP V++DEA+QA+EP+ LVP+T+GC QLVLVGDH QLPPT+ S  A + GLG SLF RL   G++  +LT QYRMHP I ++PS RFY   L      A  RP   GF WP    PVAFV + G E             +   +S  N  EA  ++ ++ G+L   ++   D+G++TPYS QV+ + +L   A  R        LEI+SVD YQGREKE+IV SAVR+N+HG++GFL D RRLNVAITRA+RGL+VLG+ +TLRHD  W A+L WA
Sbjct:  209 LAAMTLNPSQRAAVESALERRLTLIQGPPGTGKTHTAVHLLSALVNIGR----GPILATAESNVAVDNLLEGLLELGVKAVRIGRPVKVREHLRQATLDAQIERHPLQEELRFVREQNDELRRSLSGLKGKEKGMAHKDVNRNFKEMRSIEANMIASVLDGAEVICATTIGVGHKL--------------------------------LRDRRFPVVLMDEATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTECGLDTHMLTTQYRMHPTIREYPSARFYEDRLDDGCTPA-DRPPAAGFLWPDWDHPVAFVPIDGSE-----------IVDEEGSSKSNLDEAAKVLSIVNGLLSAGDLTPADIGVITPYSGQVRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIVLGNTKTLRHDGTWRAWLDWA 649          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|663516390|gb|AIF06842.1| (regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_196_E05])

HSP 1 Score: 340.117 bits (871), Expect = 5.606e-101
Identity = 206/505 (40.79%), Postives = 281/505 (55.64%), Query Frame = 0
Query:  487 ASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAVRGS----TARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLK 977
            AS +P+   AR     +         LN++Q  A   AL R+L+LIQGPPGTGKT T   ++    K    +D G +LAVA SNVA DNLLEG L LG+ AVR+G+   VR  LR  T+DA + +H          +S     ++++ ++G     T R++    +++   E      IL  + V+  TC+G+ +E+          L GR                      +F  V+IDEA+QATEPA LVPL +G  Q+VL+GDH QLPPT+ S RA   GL  SLF RLA  GIEP LL  QYRMHP I+ FP+ RFY  LL+     +  RP P G  WP   +P+AF+ V G E     AP    + N  + +++ R        +L G+L    ++  D+GI+TPY+ QV+ + +    R        +E+++VD YQGREKE+I+ S VRSN  G VGFL D RRLNVA+TRAKRGL+V+GDP TLR D  WSA+L+
Sbjct:  180 ASLIPELKVARSRPTSLAPD------LNKAQREAALAALERRLTLIQGPPGTGKTHTGVRILEAWAK----QDLGTILAVADSNVAVDNLLEGLLSLGIRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLGRRVKGMKGKEKGLTYRELSRGWKEVRRIESQMRDDILDRSQVLCCTCIGSGHEL----------LDGR----------------------RFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLAEMGIEPLLLRTQYRMHPAISAFPNGRFYDDLLEDGV-TSEDRPTPAGLLWPDWDMPIAFLPVEGGEVK---APDGASKENPTEAAWIAR--------LLEGLLDAGELRQQDIGIITPYAGQVRAIRDSVPERY-----DGVEVRTVDGYQGREKEVILFSCVRSNNEGNVGFLADSRRLNVALTRAKRGLIVIGDPETLRCDEDWSAWLE 625          
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200445858|gb|OUV61852.1| (hypothetical protein CBC77_01195 [Euryarchaeota archaeon TMED117])

HSP 1 Score: 340.117 bits (871), Expect = 1.223e-100
Identity = 214/521 (41.07%), Postives = 284/521 (54.51%), Query Frame = 0
Query:  484 EALASAVPKTS--FARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH---QSVTTFKKKLEAV-----------RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGD----LEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGC 984
            E  AS+ PK S  F R     +V        LN SQ+ A+  AL RK+++IQGPPGTGKT TA   ++   + G+    G +LA A SNVA DNLLEG L  G+ AVR GR   VR  LR  TLDA L QH     +   +++ + V           +G   RD+Q  K+++   E     S+L NA V+ ST +G  + V                                L   +FP V++DEA+QA EP+++VP+++GC QL+LVGDH QLPPT+ S  A   GLG SLF RL   GI+  +LTVQYRMHP + +FPS RFY   L+    +A +RP P G  WP    P AF+ +              +       S  N  EA  +  ++  +L   ++    +GI+TPYS QV+ + ++  +  R    G     LEI SVD YQGREKE+I+ SAVRSN  G VGFL D RRLNVAITRAKRGL+VLGDP+TLR+DP W ++L WA + G 
Sbjct:  204 EESASSPPKISGKFQRVEPSDVV--------LNPSQKEAMDAALKRKVTIIQGPPGTGKTHTAVATLAQLAREGR----GPILATAESNVAVDNLLEGLLEAGIRAVRTGRPVKVRESLREATLDAQLEQHPKQDEIAIIREENDEVQRALSKLKGREKGLAHRDIQYNKKEIRRLEKEMIASVLDNAQVICSTNIGTGHRV--------------------------------LDHRRFPIVLMDEATQAIEPSSMVPISKGCRQLILVGDHRQLPPTVISNDAQEGGLGRSLFERLIDVGIKSHMLTVQYRMHPVLREFPSARFYEDKLED-GCSADQRPAPAGVLWPDWDHPFAFIPIT-----------GSEIEEEEGGSRSNPAEAARIYGLVQELLIPGDVTPNQIGIITPYSGQVRALCDIFDSN-REREQGQRYAGLEINSVDGYQGREKEVIIFSAVRSNPDGIVGFLSDRRRLNVAITRAKRGLIVLGDPQTLRYDPTWRSWLDWAEERGL 667          
The following BLAST results are available for this feature:
BLAST of EWM21879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102223|gb|EWM21879.1|0.000e+0100.00regulator of nonsense [Nannochloropsis gaditana][more]
gi|873230613|emb|CEM10847.1|4.768e-11242.91unnamed protein product [Vitrella brassicaformis C... [more]
gi|1200455913|gb|OUV71610.1|1.387e-11143.61hypothetical protein CBC92_03865 [Euryarchaeota ar... [more]
gi|545703980|ref|XP_005704314.1|3.504e-10438.51endonuclease [Galdieria sulphuraria] >gi|452820756... [more]
gi|1200378823|gb|OUU97432.1|4.952e-10441.68hypothetical protein CBC45_08625 [Euryarchaeota ar... [more]
gi|1200478866|gb|OUV93894.1|2.622e-10342.68hypothetical protein CBD01_07290 [Euryarchaeota ar... [more]
gi|663514497|gb|AIF05006.1|1.610e-10241.99regulator of nonsense transcripts 1 (UPF1, RENT1) ... [more]
gi|374723515|gb|EHR75595.1|1.712e-10142.94putative DNA helicase [uncultured marine group II ... [more]
gi|663516390|gb|AIF06842.1|5.606e-10140.79regulator of nonsense transcripts 1 (UPF1, RENT1) ... [more]
gi|1200445858|gb|OUV61852.1|1.223e-10041.07hypothetical protein CBC77_01195 [Euryarchaeota ar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8829rna8829Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications