EWM21879.1, cds8799 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|585102223|gb|EWM21879.1| (regulator of nonsense [Nannochloropsis gaditana]) HSP 1 Score: 2024.21 bits (5243), Expect = 0.000e+0 Identity = 996/996 (100.00%), Postives = 996/996 (100.00%), Query Frame = 0 Query: 1 MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD 996 MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD Sbjct: 1 MRAAHVSLACLSLLLSIFALTATGFSTYPGQLAGFQTLPQSRRHSRLFRQQRGLPITALRAGENSGTSSEAGEAGRGFGASVRRSSKKEGGRSSGLRPRAPNAFSSIGKSVRLRGKFGGGPMDMGLLDGYSKLMEQAEAVQRHYSGRRPVQDGGGRQRGAKKAATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRGDPTGGERFRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAERFDVVASHHNERGGAGLGSGSAGQNHHSLLAMSPYAAAAAANKKAARQQQSLSKKMREDEDAGRGKAGARSSRGHRDNGGRGKAKAGAATKSSWEALASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGELRERLD 996
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|873230613|emb|CEM10847.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 390.193 bits (1001), Expect = 4.768e-112 Identity = 224/522 (42.91%), Postives = 303/522 (58.05%), Query Frame = 0 Query: 513 LNESQERALRMALSRKLSLIQGPPGTGKTRTACHLV-SIAVKLGQRRDAG---------------------KVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH------------------------QSVTTFKKKL--EAVRGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVM 986 +++SQE A+R +L+++++LIQGPPGTGKTRT+C L+ SI + R G KVLA AFSNVAADNLLEG +++G+ AVR GRA V P L+N+T+DA++ QH Q T+ + K +A R ++ A+ D++ AE A I+ ADVVV++ + A + + V P + P VKF TV+IDEASQ TEPA VP+ +GCEQL+LVGD QLP T+ S +A GL +SLF+RL +AG+ P +L QYRMHP IA FPS FY L S P +RP P GFPWP PVAFV+V + P + G+ TS NR+EA L++VL ++ ++ D+G+VTPY+AQV+ + + + L +E++SVD YQGREKE+I+ SAVRSN G VGFL DWRRLNVA+TRA+RGLVV GDPRTL DPH+ +Y++W G V+ Sbjct: 649 VDQSQEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKAARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKAASQAKLDEANRLLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQV----------------PEWDTQRVP---VKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIP-KPEERPTPGGFPWPDDVKPVAFVSVMEPAGYSESRPDETTKWGGSTTSKYNREEALCLVKVLKELVSHGDVSYTDIGVVTPYAAQVRFLQDTLRTELGRDTAALIEVKSVDGYQGREKEVILFSAVRSNPTGSVGFLRDWRRLNVAVTRARRGLVVFGDPRTLTADPHYDSYIQWCKHEGLVV 1150 HSP 2 Score: 93.2041 bits (230), Expect = 1.586e-15 Identity = 72/282 (25.53%), Postives = 119/282 (42.20%), Query Frame = 0 Query: 164 ATFHALSSYSLHFLRLLEEELVYEEAEVMQRLRYWPRSRLMEEGLGVFGVVARPRGRLFKEYILRFTLPARRGGGGRRPGNAPAGALGKKGASMDTPPQTSRKKGDAEPPGPFPRAPPLAYHRLGPGDIISITPDKQNPLGSDQVIEGLVLERGAAHVDVVVKEIPPGVVWRRG------------------------------------------DPTGGER--------------FRLDLYLNRISFQRMVAAVHQVTGLETGYTVSPEIRDILVKSFAE 389 A + L YS HF LLEEE++ ++ ++RLR W +RL EG+ + G+ A+ R+ KE I+R LP RR G + Q + R P L +H+ GD +++T +QNPL + EG+V E+ ++D+ V ++PP +W++ D T G+ +RLD++ NR+S RM+ A+ ++T ++P++RD LV SF + Sbjct: 318 AAYPHLVDYSDHFSSLLEEEVLVKDEMAVERLRNWTNARLESEGILIRGLEAKHTHRILKEKIVRLQLPIE---TVRRNSTDAGGDKDGDVDGEEGDGQQVESRL-------VYRRPYLPFHQFSRGDAVTLTLGEQNPLDAMDRYEGVVHEKHPKYIDIAVMDLPPE-LWKKNRIPNKQQQQQDPDDQDPAERKLFRPADADTADTVEEDELGQDDDTQGQEDIDDNNNNNNRTVSWRLDMFENRVSHDRMITALAELTAPNVSDKMAPDLRDALVYSFIQ 588
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200455913|gb|OUV71610.1| (hypothetical protein CBC92_03865 [Euryarchaeota archaeon TMED132]) HSP 1 Score: 369.392 bits (947), Expect = 1.387e-111 Identity = 215/493 (43.61%), Postives = 289/493 (58.62%), Query Frame = 0 Query: 510 RFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH--QSVTTF--------KKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL---AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985 R LN+SQ+ A+ +A+ R+L+LIQGPPGTGKT TA HL+ GQ G ++A A SNVA DNLLEG L LG+ AVR+GR VR LR+ TLDALL H Q F +K L +RG +D++ +++ E S+L A+VV +T +G+ +++ LG R K+P V+IDEA+QA+EP+ LVP+ +GC QL+LVGDH QLPPT+ S RA GLG SLF RL I +LT QYRMHP I +FPS RFY L+ + +RP P G WP PVAF+ V G EE + +S N EA ++ V+ G+L+ +IQ+ D+GI+TPY+ QV+ +++L A R LEI+SVD YQGREKE+IV S VR+N++G+VGFL D RRLNVA+TRAKRGL+V+G TLR +P W ++L W + GC+ Sbjct: 220 RDSLNDSQQNAVEVAMQRRLTLIQGPPGTGKTHTAVHLLKELADKGQ----GAIMASAESNVAVDNLLEGLLDLGVKAVRIGRPVKVRENLRDATLDALLENHPLQEELNFIRDENDELRKGLSKLRGKEKGLAHKDIKHNFKEMRRIESEMTASVLDEAEVVCATTIGSGHQI----------LGNR----------------------KYPIVLIDEATQASEPSALVPINRGCRQLILVGDHKQLPPTVISDRAESGGLGQSLFERLHKCEIPAQMLTTQYRMHPSIREFPSARFYDNQLED-GCSKEQRPAPAGLLWPDWDHPVAFIPVEGSEE-----------LDEEGSSRSNFSEAAKVLSVIDGLLQIGDIQTTDIGIITPYNGQVRVLSDLFEQAGGRETGEKYSGLEIKSVDGYQGREKEVIVFSTVRANENGEVGFLKDKRRLNVALTRAKRGLIVIGHLSTLRQEPTWKSWLDWVEERGCL 664
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|545703980|ref|XP_005704314.1| (endonuclease [Galdieria sulphuraria] >gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]) HSP 1 Score: 350.903 bits (899), Expect = 3.504e-104 Identity = 191/496 (38.51%), Postives = 277/496 (55.85%), Query Frame = 0 Query: 514 NESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVT----TFKKKLEAVR--------GSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNI---------QSM-DVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMT 987 NESQ+ A + AL R+L+LIQGPPGTGKT+T +++ V+LG+ +LA A++++A DN+L+ R + A+R+G+ A + L ++LD+LL + + KK +E + G RD + L+ E++A IL +V+STCVGA E+ L+ + F V IDEA+Q+ EP L+P+ +GCEQL+L GDHYQLPPTI + AA GL VSLF RL +G+EP LL QYRMHP IA FPSQ FY GLL S P + + FPWP+P P+AF+ V G+E T TSY N +E+ V++E + ++ QS +GI+TPY+ Q++ + + +E+++VD +QGREK++I++S VRSN +GFL DWRRLNVAITR++ GL+V+G+ TL + HW +L+W HGC+ T Sbjct: 266 NESQQTAWKNALERRLTLIQGPPGTGKTKTLAKILASLVQLGR----TPILASAYTHIATDNILDELERYNIPAIRIGKPANIHRNLWKYSLDSLLERDTRIIEKRENLKKAMERLAQPKRGKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEI--------------------------------LKNISFQVVAIDEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVRSGVEPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCT---QSISNYFPWPNPQTPIAFIPVLGEEWVTEQG-----------TSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNVAITRSRSGLIVIGNANTLSRNDHWKRWLEWISHHGCIYT 711
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200378823|gb|OUU97432.1| (hypothetical protein CBC45_08625 [Euryarchaeota archaeon TMED85]) HSP 1 Score: 348.977 bits (894), Expect = 4.952e-104 Identity = 208/499 (41.68%), Postives = 286/499 (57.31%), Query Frame = 0 Query: 512 KLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGK-VLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAV------------------RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDE---EDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGD---LEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985 +LNE Q +A+ A+ ++LSLIQGPPGTGKT TA ++ G +++ +LAVA SNVA DNLLEG L L +NAVR+G+ VR LR T+DA + H+ +K L+ + +G RD++ +D E IL NADV+ +TC+G+ + + L GR +FP V+IDEA+QATEPATLVP+ +GC+QLVLVGDH QLPPT+ S RA + GL +SLF RL G+ ++L QYRMHP IA+FPS + Y GLLK+ KRP P G WP P+AFV V G E D H S N EA ++++ +L+ +I ++GI++PY+ QV+ + +L ++ + G +E++SVD YQGREKE+I++SAVRSN G VGFL D RRLNVA+TRAKRGLVV+GDP+TLR+ W +L W + + Sbjct: 211 QLNEVQNQAVSKAMEQRLSLIQGPPGTGKTYTAVRILE-----GWAKNSNTPILAVAESNVAVDNLLEGLLNLRVNAVRLGQPVKVRESLREATIDAKMEVHR----LRKDLDVILELNEDLSRRISGMKGKDKGLAHRDLKKGWKDARRIEQQMKDDILENADVICATCIGSGHIL----------LDGR----------------------RFPRVLIDEATQATEPATLVPIVRGCKQLVLVGDHKQLPPTVISSRAEKMGLNISLFERLIQLGVNSTMLLEQYRMHPCIAEFPSLQSYEGLLKNAISED-KRPTPVGLIWPDFENPIAFVPVEGGEIVSPDGH--------------SKANPTEAGWVLKMAESILQGEDIFPHEIGIISPYNGQVRAIRDLMESSGGMEDGGKWEGIEVKSVDGYQGREKEVIILSAVRSNPEGNVGFLDDSRRLNVALTRAKRGLVVIGDPKTLRNQRDWDFWLTWVEQKNLI 653
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200478866|gb|OUV93894.1| (hypothetical protein CBD01_07290 [Euryarchaeota archaeon TMED141]) HSP 1 Score: 353.214 bits (905), Expect = 2.622e-103 Identity = 210/492 (42.68%), Postives = 284/492 (57.72%), Query Frame = 0 Query: 513 LNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAV----RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL-----AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCV 985 LN SQ A+ AL+++L+LIQGPPGTGKT TA H+++ G+ G +LA A SNVA DNLLEG L G+NAVR+G+ VR LR TLDA L H + T K+ L + RG +D+ +R+++ E +L +A+VV +T VG+ + + LG R +FP V++DEA+QA+EP+++VP+ +GC LVLVGDH QLPPT+ S RAA GLG SLF RL G+ +LT QYRMHP I +FP RFY G L+ + +RP P GF WP PVAFV V G+EE + +S NR +A ++ +L +++ DVG+VTPY+AQV+ +T+L F+ LE++SVD YQGREKE+IV VRSN G++GFL D RRLNVAITRA+RGLV++G P+TLR D W A+L WA + G + Sbjct: 436 LNASQSEAVEAALNQRLTLIQGPPGTGKTHTAVHVLATMAAQGR----GPILATAESNVAVDNLLEGLLDAGVNAVRIGQPVKVRASLREATLDARLEHHPLQEDLAALREEHATLKRGLSGLKGKERGMAHKDLSMQRREMQRLEQQMVDGLLDDAEVVCATTVGSGHRI----------LGSR----------------------RFPIVLVDEATQASEPSSMVPIVRGCRHLVLVGDHRQLPPTVISDRAAEGGLGRSLFERLIDLGLSTHMLTTQYRMHPSIREFPGARFYDGRLEDGCDRS-ERPPPAGFLWPDWDRPVAFVPVDGEEE-----------LDAEGSSKANRDQAAATFSIVRDLLAAGDLEGHDVGVVTPYTAQVRMMTDLFDEGGGLDEGGRFH--GLEVRSVDGYQGREKEVIVFCTVRSNPRGEIGFLADRRRLNVAITRARRGLVMVGHPQTLRRDGTWRAWLDWAEELGLM 877
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|663514497|gb|AIF05006.1| (regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_178_D06]) HSP 1 Score: 346.28 bits (887), Expect = 1.610e-102 Identity = 207/493 (41.99%), Postives = 281/493 (57.00%), Query Frame = 0 Query: 512 KLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH---QSV-------TTFKKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQ-----------ARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWA 979 +LNESQ A+ AL+ +L+L+QGPPGTGKT TA ++ + G G +LA A SNVA DNLLEG L LG+ AVR+G+ VR LR T+ A + H + V +++L +++G RD++ RD+ E I+ A+VV +TC+G + + L +FP ++IDE++QATEPAT VP+ + C +LVLVGDH QLPPT+ S RA GL SLF RL GIEP LL QYRMHP IA+FPS R+Y LL++ A +RP P GF WP PVAF+ V G EE + S +N EA +++V+ +L ++Q D+G+V+PY+ QV+ + ++ A+ R LE++SVD YQGREKE+IV+S VR+N+ G+VGFL D RRLNVAITRAKRGL+V+G P TLRHD W A+L WA Sbjct: 251 QLNESQFAAVEAALAHRLTLVQGPPGTGKTHTAVRILKGWAEEG----TGPILACADSNVAVDNLLEGLLALGVRAVRIGQPVKVRSNLREATVRARMEAHPLQEEVRELLGLQEDLQRRLPSLKGKDKGLGHRDLKNGWRDIRALENEMIEDIIDTAEVVCATCIGVGHPM--------------------------------LDKRRFPNLLIDESTQATEPATWVPIMRACRRLVLVGDHRQLPPTVISKRAEEDGLDRSLFERLVDLGIEPHLLNTQYRMHPTIAEFPSSRYYDNLLENGV-TAEQRPPPAGFLWPDWERPVAFIPVDGAEELAE-----------DGASRLNVAEAGWVVKVVQDLLAPGDLQPNDIGVVSPYNGQVRLLADMLHEAGGLDEDDESAKFR-----GLEVRSVDGYQGREKEVIVLSTVRANETGEVGFLRDHRRLNVAITRAKRGLIVIGSPNTLRHDSDWEAWLDWA 690
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|374723515|gb|EHR75595.1| (putative DNA helicase [uncultured marine group II euryarchaeote]) HSP 1 Score: 342.043 bits (876), Expect = 1.712e-101 Identity = 210/489 (42.94%), Postives = 281/489 (57.46%), Query Frame = 0 Query: 508 VARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAVRGSTA----RDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTEL---AQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWA 979 +A LN SQ A+ AL R+L+LIQGPPGTGKT TA HL+S V +G+ G +LA A SNVA DNLLEG L LG+ AVR+GR VR LR TLDA + +H + ++ L ++G +DV +++ E S+L A+V+ +T +G +++ LR +FP V++DEA+QA+EP+ LVP+T+GC QLVLVGDH QLPPT+ S A + GLG SLF RL G++ +LT QYRMHP I ++PS RFY L A RP GF WP PVAFV + G E + +S N EA ++ ++ G+L ++ D+G++TPYS QV+ + +L A R LEI+SVD YQGREKE+IV SAVR+N+HG++GFL D RRLNVAITRA+RGL+VLG+ +TLRHD W A+L WA Sbjct: 209 LAAMTLNPSQRAAVESALERRLTLIQGPPGTGKTHTAVHLLSALVNIGR----GPILATAESNVAVDNLLEGLLELGVKAVRIGRPVKVREHLRQATLDAQIERHPLQEELRFVREQNDELRRSLSGLKGKEKGMAHKDVNRNFKEMRSIEANMIASVLDGAEVICATTIGVGHKL--------------------------------LRDRRFPVVLMDEATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTECGLDTHMLTTQYRMHPTIREYPSARFYEDRLDDGCTPA-DRPPAAGFLWPDWDHPVAFVPIDGSE-----------IVDEEGSSKSNLDEAAKVLSIVNGLLSAGDLTPADIGVITPYSGQVRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIVLGNTKTLRHDGTWRAWLDWA 649
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|663516390|gb|AIF06842.1| (regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote KM3_196_E05]) HSP 1 Score: 340.117 bits (871), Expect = 5.606e-101 Identity = 206/505 (40.79%), Postives = 281/505 (55.64%), Query Frame = 0 Query: 487 ASAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH----------QSVTTFKKKLEAVRGS----TARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDLEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLK 977 AS +P+ AR + LN++Q A AL R+L+LIQGPPGTGKT T ++ K +D G +LAVA SNVA DNLLEG L LG+ AVR+G+ VR LR T+DA + +H +S ++++ ++G T R++ +++ E IL + V+ TC+G+ +E+ L GR +F V+IDEA+QATEPA LVPL +G Q+VL+GDH QLPPT+ S RA GL SLF RLA GIEP LL QYRMHP I+ FP+ RFY LL+ + RP P G WP +P+AF+ V G E AP + N + +++ R +L G+L ++ D+GI+TPY+ QV+ + + R +E+++VD YQGREKE+I+ S VRSN G VGFL D RRLNVA+TRAKRGL+V+GDP TLR D WSA+L+ Sbjct: 180 ASLIPELKVARSRPTSLAPD------LNKAQREAALAALERRLTLIQGPPGTGKTHTGVRILEAWAK----QDLGTILAVADSNVAVDNLLEGLLSLGIRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLGRRVKGMKGKEKGLTYRELSRGWKEVRRIESQMRDDILDRSQVLCCTCIGSGHEL----------LDGR----------------------RFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLAEMGIEPLLLRTQYRMHPAISAFPNGRFYDDLLEDGV-TSEDRPTPAGLLWPDWDMPIAFLPVEGGEVK---APDGASKENPTEAAWIAR--------LLEGLLDAGELRQQDIGIITPYAGQVRAIRDSVPERY-----DGVEVRTVDGYQGREKEVILFSCVRSNNEGNVGFLADSRRLNVALTRAKRGLIVIGDPETLRCDEDWSAWLE 625
BLAST of EWM21879.1 vs. NCBI_GenBank
Match: gi|1200445858|gb|OUV61852.1| (hypothetical protein CBC77_01195 [Euryarchaeota archaeon TMED117]) HSP 1 Score: 340.117 bits (871), Expect = 1.223e-100 Identity = 214/521 (41.07%), Postives = 284/521 (54.51%), Query Frame = 0 Query: 484 EALASAVPKTS--FARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQH---QSVTTFKKKLEAV-----------RGSTARDVQAAKRDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGRGGGGGGWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAVGGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGD----LEIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGC 984 E AS+ PK S F R +V LN SQ+ A+ AL RK+++IQGPPGTGKT TA ++ + G+ G +LA A SNVA DNLLEG L G+ AVR GR VR LR TLDA L QH + +++ + V +G RD+Q K+++ E S+L NA V+ ST +G + V L +FP V++DEA+QA EP+++VP+++GC QL+LVGDH QLPPT+ S A GLG SLF RL GI+ +LTVQYRMHP + +FPS RFY L+ +A +RP P G WP P AF+ + + S N EA + ++ +L ++ +GI+TPYS QV+ + ++ + R G LEI SVD YQGREKE+I+ SAVRSN G VGFL D RRLNVAITRAKRGL+VLGDP+TLR+DP W ++L WA + G Sbjct: 204 EESASSPPKISGKFQRVEPSDVV--------LNPSQKEAMDAALKRKVTIIQGPPGTGKTHTAVATLAQLAREGR----GPILATAESNVAVDNLLEGLLEAGIRAVRTGRPVKVRESLREATLDAQLEQHPKQDEIAIIREENDEVQRALSKLKGREKGLAHRDIQYNKKEIRRLEKEMIASVLDNAQVICSTNIGTGHRV--------------------------------LDHRRFPIVLMDEATQAIEPSSMVPISKGCRQLILVGDHRQLPPTVISNDAQEGGLGRSLFERLIDVGIKSHMLTVQYRMHPVLREFPSARFYEDKLED-GCSADQRPAPAGVLWPDWDHPFAFIPIT-----------GSEIEEEEGGSRSNPAEAARIYGLVQELLIPGDVTPNQIGIITPYSGQVRALCDIFDSN-REREQGQRYAGLEINSVDGYQGREKEVIIFSAVRSNPDGIVGFLSDRRRLNVAITRAKRGLIVLGDPQTLRYDPTWRSWLDWAEERGL 667 The following BLAST results are available for this feature:
BLAST of EWM21879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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