EWM21880.1, cds8788 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|585102224|gb|EWM21880.1| (u3 small nucleolar rna-associated protein 18 [Nannochloropsis gaditana]) HSP 1 Score: 1249.57 bits (3232), Expect = 0.000e+0 Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 0 Query: 1 MPSGARRSSRGGAGKPPPGEGERVPDSQPPDAPDKDAAPLFYVDREENEMVGTLDVDNELDQEAGVGPEEANIIAQAGPSKRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGARDTEALLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYESS 618 MPSGARRSSRGGAGKPPPGEGERVPDSQPPDAPDKDAAPLFYVDREENEMVGTLDVDNELDQEAGVGPEEANIIAQAGPSKRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGARDTEALLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYESS Sbjct: 1 MPSGARRSSRGGAGKPPPGEGERVPDSQPPDAPDKDAAPLFYVDREENEMVGTLDVDNELDQEAGVGPEEANIIAQAGPSKRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGARDTEALLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYESS 618
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|219120925|ref|XP_002185694.1| (anthranilate synthase. anthranilate synthetase. chorismate lyase, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582543|gb|ACI65164.1| anthranilate synthase. anthranilate synthetase. chorismate lyase, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 383.259 bits (983), Expect = 3.350e-124 Identity = 206/469 (43.92%), Postives = 297/469 (63.33%), Query Frame = 0 Query: 156 PAWKDEDDETLWVDVARKDRLRKLRRHPDE---RDISGADYQERLRARFAKGHEAA--LDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGG---LLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 PAW DEDD L V++ RLRKLR+ E + G D +ERLR R+ + +A DWARL +++S +++ D+D F+S + + +++ RRL P TL + RC DAN +P+Q+V+QAV FHP++ LL TAGLDKTLRFFQV +++KV G+ F LPI +A+F+ G+ VVVSGRR FFY +D AG +P+++GREE+SLE+ SPDG+ +AF G DGY++L A +KQW + K++G+ RA+ F+ DG +++ASG D +YRWDLR+RRC+ RF N+ GT+TS LAAS+ LAVGAESGVVN++ E ++ A G H S + P K++ +L T+ D + FN DG +LA +S+ +++++++HVPS TVFSNWPT +TP+ + ++ FSP S LAVGND+G+ LLYRL HY+ Sbjct: 5 PAWVDEDDVGLEVNLLATSRLRKLRKSKAEVAALALCGTDLEERLRQRYQRTTQATARTDWARL-----------------------SDSSTLIDKDAGNNDEDSDSDFKSLST-SLLLHSTSTRRLPPNTLNLVRCPDANQSDPNQSVLQAVHFHPASDADQPLLLTAGLDKTLRFFQVGVDKSEKVHGIHFPKLPIYSASFLGSSGN-----VVVSGRRSFFYIYDTVAGKLELIPKILGREERSLEKCFPSPDGRTIAFVGNDGYIILFDAHAKQWIADLKISGSVRAITFTPDGEYILASGSDGEIYRWDLRTRRCVERFTNQDGTITSYLAASSRHLAVGAESGVVNMFSEHSMGYRAVG--HVVVSERN-----PMKSILNLHTSADMVRFNGDGQILAFSSRREKNSMKLLHVPSATVFSNWPTSKTPLGFVWSMDFSPESKYLAVGNDKGKCLLYRLMHYQ 437
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|168041425|ref|XP_001773192.1| (predicted protein [Physcomitrella patens] >gi|162675551|gb|EDQ62045.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 382.104 bits (980), Expect = 2.434e-123 Identity = 219/468 (46.79%), Postives = 290/468 (61.97%), Query Frame = 0 Query: 154 RTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFV-DGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAAS--AGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYESS 618 R PAW+DE D + VD+ RL+KLR DE I ++Y RLRA AK + + WA LP R R+ GAE EEEEE E +++ GL + LVV + RL G +EV+R +DAN+ EPS AVVQ+V FH S G LL TAG DK LRFFQ+DGKRN KV G+F +D PI AAFV DG G VV +GRR FF+ +DL+AG RV ++GREEKSLERF SPDG+ +AFTG +GY++L RS+Q G KMNG L+F+ADG+ L++ GGD VY WDLR+RRC+ + +EG +AL S + + A G+ +GVVNLY E+ LGG P KA +L T+VD L F+ D +LA++S+ +D++R++HVPS+TVFSNWPT +TP++Y ++AFSP G A GN G+ LL+RLRHY+ + Sbjct: 38 RKPAWEDEHDAAVVVDLKAASRLKKLRTTADELVIPASEYAARLRAHHAKLNPSTA-WAELP---WQRKKRRQEGGDDFGLGLGAEEDEEEEEYEGEEEENQRGLLLEHSDLVV----KNKGRLPQGLIEVSRVKDANIVEPSDAVVQSVDFH-SNGQLLLTAGFDKKLRFFQIDGKRNPKVQGIFLEDFPIHKAAFVPDGSG------VVAAGRRNFFFVYDLQAGKVERVNCMVGREEKSLERFEVSPDGKIVAFTGNEGYIILASLRSRQCIGTLKMNGDTSHLSFAADGKELLSIGGDGEVYHWDLRTRRCIHKAPDEGCVKNTALQVSPDSKIFATGSSAGVVNLYNRESFLGGVR---------------KPLKAFMNLTTSVDNLRFSPDSQILAISSRMKKDSVRLIHVPSQTVFSNWPTLKTPLQYVHSMAFSPGGGYFATGNGAGKALLFRLRHYDHA 475
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|502077326|ref|XP_004485620.1| (PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cicer arietinum]) HSP 1 Score: 383.259 bits (983), Expect = 1.113e-122 Identity = 200/465 (43.01%), Postives = 280/465 (60.22%), Query Frame = 0 Query: 154 RTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVE-GDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAAS--AGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHY 615 R P W DE++E + V++A+ +RLRKLR+ DE ISG++Y RLRA+ K + DWA+L + G + D + E +++E + VV G +D + R++ LVV S + +L PG +E +R DAN+Q+PS + +VQFH G LL GLDK LRFFQ+DGKRN K+ +F +D PI+ A+F+ G +V++SGRR FFY DL ++ L+GREEKSLE F SPD Q +AF G +GY++LV +SKQ G KMNGT R+LAF+ DG+ L+++GGD VY WDLR+R C+ + +EG ++AL S A G++SGVVN+Y E LGG P K + +L VD + FNHD +LA+ S + +L+++HVPS TVFSNWP T + YP + FSP G +AVGN G+VLLY+L HY Sbjct: 127 RKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENVISGSEYVSRLRAQHVKLNRGT-DWAQLDS--GSKID----------DSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSS----KLLPGHIEYSRLVDANIQDPSNGPINSVQFH-RNGQLLLATGLDKKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGS-----QVILSGRRKFFYSLDLVKARVDKIGPLLGREEKSLEFFEVSPDSQMIAFVGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAGGDGHVYHWDLRTRTCMHKGVDEGCINSTALCTSPLGTHFAAGSDSGVVNIYNREEFLGGKR---------------KPIKTIDNLTAKVDFMKFNHDSQILAICSSMKKSSLKLIHVPSYTVFSNWPAPNTSLHYPRCIDFSPGGGFMAVGNASGKVLLYKLHHY 553
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|1021533584|ref|XP_016163753.1| (U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1021533586|ref|XP_016163754.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1191765889|ref|XP_020962196.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1191765891|ref|XP_020962197.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1191765894|ref|XP_020962198.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1191765896|ref|XP_020962200.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1191765898|ref|XP_020962201.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis]) HSP 1 Score: 382.874 bits (982), Expect = 1.431e-122 Identity = 211/558 (37.81%), Postives = 312/558 (55.91%), Query Frame = 0 Query: 81 KRQRKQNEQQRRR--------------------KVDDEAEKDDEERTLERLVFGARDTEALLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAG--MLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 KR+R+Q+E Q+ R K D+E E D++ + L F R ++L +V+EG + E + + + R P W D+++E +++A +RLRKLR+ DE ISG++Y RLRA+ K + DWA++ D R R + E+ EE E + +G+ D + R++ LVV S + +L PG +E ++ DAN+Q+PS + +VQFH LL GLD+ LRFFQ+DGKRN K+ +F +D P++ A+F+ G +V++SGRR FFY DL +V L+GREEKSLE F SPD + +AF G +GY++LV ++KQ KMNGT R+LAF+ DG+ L++ GGD VY WDLR+ C+ + +EG ++AL+ S G + A G++SG+VN+Y E LGG P K + +L T VD + FNHD +LA+ S + +L+++H+PS TVFSNWP + YP L FSP G +AVGN G+VLLY+L HY+ Sbjct: 45 KRKREQSEMQQVREMKKLESFLFGSLYSPVEFGKEDNEVETGDKKSS--DLFFTDRSANSVL----------SVYEGDADISEESDDDRAAVQRKPVWVDDEEEKATINIANVNRLRKLRKEEDEDLISGSEYVSRLRAQHVKLNPGT-DWAQI--------DSRSKIDRSSDD----ESDEENEAALNQGNKDVDDILRTNEDLVVKSSS----KLLPGHVEYSKLVDANIQDPSNGPINSVQFH-RNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGS-----QVILSGRRKFFYSFDLVKAKVDKVGPLVGREEKSLENFEVSPDSKLVAFVGNEGYILLVSTKTKQLVSTLKMNGTVRSLAFAEDGQQLLSGGGDGQVYHWDLRTMTCMHKGVDEGCINSTALSTSPGGKLFAAGSDSGIVNIYNREEFLGGKR---------------KPIKTIENLTTKVDFMKFNHDSQILAICSCMKKSSLKLIHIPSYTVFSNWPPPNASLSYPRCLDFSPGGGFMAVGNSAGKVLLYKLHHYQ 552
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|703064155|ref|XP_010087134.1| (U3 small nucleolar RNA-associated protein 18-like protein [Morus notabilis] >gi|587835805|gb|EXB26574.1| U3 small nucleolar RNA-associated protein 18-like protein [Morus notabilis]) HSP 1 Score: 382.874 bits (982), Expect = 2.300e-122 Identity = 221/557 (39.68%), Postives = 313/557 (56.19%), Query Frame = 0 Query: 81 KRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGARDTEALLQGEDGLTPQD-------------------TVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAAS--AGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 KR++ Q EQ + + E++ E +TLE ++FG+ + L +D Q+ +V+E G E E E R P W DE++E +++A+ +RLRKLR+ DE ISG++Y RLRA+ AK + +WARL + G RGD E G ++ E V+ L R++ LVV S R +L PG LE + DAN QEPS A + +VQFH LL TAGLDK L+FFQ+DGKRN K+ +F +D P+ A+F+ G +V+++GRR FFY DL ++ L+GREEKSLE F SPD +AF G +GY++LV +++K+ G KMNGT R+LAF+ DG+ L++SGGD VY WDLR+R CL + +EG ++L S + A G+ESG+VN+Y + LGG P K + +L T V+ + FN+D +LA+ S +D+L+++HVPS TVFSNWP + YP L FSP G +AVGN G+VLLY+L HYE Sbjct: 44 KRKKAQKEQDEKLVL----EQEREMKTLENVLFGSLHSPILFGKDDEDESQNGFDKDSALCFVDRSANTALSVYEDGKELLEETEDEEEKKLRKPVWVDEEEEKARINIAKVNRLRKLRKEEDESLISGSEYVSRLRAQHAKLNPGT-EWARLDS--GIRGDRYSDDEASDEEIGAVLARGYKDVEAVDN------LLRTNEDLVVKS----RAKLLPGHLEYSALVDANAQEPSNATINSVQFH-RNAQLLLTAGLDKRLKFFQIDGKRNTKIQSIFLEDFPVLKASFLPDGS-----QVIIAGRRKFFYAFDLVKAKVDKIGPLVGREEKSLESFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCLHKGVDEGCINGTSLCTSPDGTLFAAGSESGIVNVYNRDDFLGGKR---------------KPLKTIENLTTRVNFMKFNNDAQVLAVCSHMKKDSLKLIHVPSFTVFSNWPPRNRHLSYPRCLDFSPGGGFMAVGNAAGKVLLYKLHHYE 562
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|1021481863|ref|XP_016184036.1| (U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1021481865|ref|XP_016184037.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1021481867|ref|XP_016184038.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis] >gi|1021481869|ref|XP_016184039.1| U3 small nucleolar RNA-associated protein 18 homolog [Arachis ipaensis]) HSP 1 Score: 380.563 bits (976), Expect = 1.117e-121 Identity = 212/556 (38.13%), Postives = 310/556 (55.76%), Query Frame = 0 Query: 81 KRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGARDTEALLQGEDG-----------LTPQD-------TVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAG--MLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 KR+R+Q+E Q+ R E + LE +FG+ + ED L D +V+E + E + + + R P W D+++E +++A +RLRKLR+ DE ISG++Y RLRA+ K + DWA++ D R R + E+ EE E + +G+ D + R++ LVV S + +L PG +E ++ DAN+Q+PS + +VQFH LL GLD+ LRFFQ+DGKRN K+ +F +D PI+ AAF+ G +V++SGRR FFY DL +V L+GREEKSLE F SPD + +AF G +GY++LV +++KQ KMNGT R+LAF+ DG+ L++ GGD VY WDLR+ C+ + +EG ++AL+ S G + A G++SG+VN+Y E LGG P K + +L T VD + FNHD +LA+ S + +L+++H+PS TVFSNWP + YP L FSP G +AVGN G+VLLY+L HY+ Sbjct: 45 KRKREQSEMQQVR----------EMKKLESFLFGSLYSPVEFGKEDNEVEIGDKKSSDLFFTDRSANNVLSVYEEDADISEESDDDRAAVQRKPVWVDDEEEKATINIANVNRLRKLRKEEDEDLISGSEYVSRLRAQHVKLNPGT-DWAQI--------DSRSKIDRSSDD----ESDEENEAALNQGNKDVDDILRTNEDLVVKSSS----KLLPGHVEYSKLVDANIQDPSNGPINSVQFH-RNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPDGS-----QVILSGRRKFFYSFDLVKAKVDKVGPLVGREEKSLENFEVSPDSKLVAFVGNEGYILLVSSKTKQLVSTLKMNGTVRSLAFAEDGQQLLSGGGDGQVYHWDLRTMTCMHKGVDEGCINSTALSTSPGGKLFAAGSDSGIVNIYNREEFLGGKR---------------KPIKTIENLTTKVDFMKFNHDSQILAICSGMKKSSLKLIHIPSYTVFSNWPPPNASLSYPRCLDFSPGGGFMAVGNSAGKVLLYKLHHYQ 552
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|1117544693|ref|XP_019449113.1| (PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Lupinus angustifolius] >gi|1117544695|ref|XP_019449114.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Lupinus angustifolius] >gi|1102709430|gb|OIW08288.1| hypothetical protein TanjilG_21754 [Lupinus angustifolius]) HSP 1 Score: 379.022 bits (972), Expect = 3.117e-121 Identity = 193/463 (41.68%), Postives = 280/463 (60.48%), Query Frame = 0 Query: 156 PAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAG--MLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 P W DE++E V++A+ +RLRKLR+ +E ISG++Y RLRA K + +WA++ + + +G E ++EE E DF + R++ LVV S + +L PG +E ++ DAN+Q+PS + +VQFH G LL TAGLD+ LRFFQVDGKRN K+ +F ++ PI+ A+F+ G +V++SGRR FFY DL ++ L+GREEKSLE F SPD + +AF G +GY++LV ++KQ G KMNGT R+LAF+ DG+HL+++GGD VY WDLR+ CL + +EG +SAL S G A G++SG+VN+Y E LGG P K + +L T VD + FNHD +LA+ S + +L+++H+PS TVFSN+P+ + + YP ++ FSP G +AVGN G+VLLY+L HY+ Sbjct: 121 PVWVDEEEERTTVNIAKLNRLRKLRKEEEESVISGSEYVSRLRAHHIKLNPGT-EWAQVDS------------KSKGDRSSDDELTDEENE-------DFADVLRTNEDLVVKSSS----KLLPGHIEYSKLVDANIQDPSNGPIHSVQFH-RNGQLLLTAGLDRKLRFFQVDGKRNTKIQSIFLEECPIRKASFLPDGS-----QVILSGRRKFFYSFDLVKAKVDKIGPLVGREEKSLEFFEVSPDSKLIAFVGNEGYILLVSTKTKQLVGTLKMNGTIRSLAFAEDGQHLLSAGGDGQVYHWDLRTMTCLHKGVDEGCINSSALCTSPGGTHFAAGSDSGIVNIYNREEFLGGKR---------------KPIKTIANLTTKVDFMKFNHDSQILAICSNMKKSSLKLIHIPSYTVFSNFPSANSSLHYPRSIDFSPGGGFMAVGNAAGKVLLYKLHHYQ 538
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|357446023|ref|XP_003593289.1| (U3 small nucleolar RNA-associated-like protein [Medicago truncatula] >gi|355482337|gb|AES63540.1| U3 small nucleolar RNA-associated-like protein [Medicago truncatula]) HSP 1 Score: 379.407 bits (973), Expect = 4.183e-121 Identity = 197/464 (42.46%), Postives = 277/464 (59.70%), Query Frame = 0 Query: 154 RTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAAS--AGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHY 615 R P W DE++E + V++A+ +RLRKLR+ DE ISG++Y RLRA+ AK + DWA+L + G + DG T +E + V G +D + R++ LVV S + +L PG LE ++ DAN+Q+P+ + +VQFH G LL AGLD+ L+FFQ+DGKRN K+ +F +D PI+ A+F+ G +V++SGRR FFY DL ++ L+GREEKS+E F SPD Q +AF G +GY++LV +SKQ G KMNGT R+LAF+ DG+ L+++GGD +Y WDLR+R C+ + +EG +AL S A G+ SGVVN+Y E LGG P K + +L T VD + FNHD +LA+ S+ +L++VH+PS TVFSNWP + YP + FSP G +AVGN G+VLLY+L HY Sbjct: 126 RKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGT-DWAQLDS--GSKMDGSSDDEL---------TDDENKAAVSRGYEDLDDILRTNEDLVVKSSS----KLLPGHLEYSKLVDANVQDPANGPINSVQFH-RNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCPIRKASFLPDGS-----QVIISGRRKFFYSLDLVKARVDKIGPLLGREEKSIEVFEVSPDSQLIAFVGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAGGDGHIYHWDLRTRTCIHKGVDEGCLNGTALCTSPVGTHFAAGSASGVVNIYNSEEFLGGKR---------------KPIKTIDNLNTEVDFMKFNHDSQILAICSRAKNSSLKLVHIPSYTVFSNWPRSNASLHYPRCIDFSPGGGFMAVGNASGKVLLYKLHHY 552
BLAST of EWM21880.1 vs. NCBI_GenBank
Match: gi|1012024060|ref|XP_015950538.1| (U3 small nucleolar RNA-associated protein 18 homolog [Arachis duranensis]) HSP 1 Score: 379.022 bits (972), Expect = 5.142e-121 Identity = 210/556 (37.77%), Postives = 308/556 (55.40%), Query Frame = 0 Query: 81 KRQRKQNEQQRRRKVDDEAEKDDEERTLERLVFGA---------RDTEA---------LLQGEDGLTPQDTVWEGGLGNNHEDEVEGSGSTRTPAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRRRRGREWGGAETSEEEEEEVVEGDDDFGGLFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLMGREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAG--MLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYE 616 KR+R+Q+E Q+ R E + LE +FG+ D EA L + +++E + E + + + R P W D+++E +++A +RLRKLR+ DE ISG++Y RLRA+ K + DWA++ D R R + E+ EE E + +G+ D + R++ LVV S + +L PG +E ++ DAN+Q+PS + +VQFH LL GLD+ LRFFQ+DGKRN K+ +F +D PI+ AAF+ G +V++SGRR FFY DL +V L+GREEKSLE F SPD + +AF G +GY+ LV ++KQ KMNGT R+LAF+ DG+ L++ GGD VY WDLR+ C+ + +EG ++AL+ S G + A G++SG+VN+Y E LGG P K + +L T VD + FNHD +LA+ S + +L+++H+PS +VFSNWP + YP L FSP G +AVGN G+VLLY+L HY+ Sbjct: 45 KRKREQSEMQQVR----------EMKKLESFLFGSLYSPVEFGKEDNEAEIGDKKSSDLFFTDCSANNVLSIYEEDADISEESDDDRAAVQRKPVWVDDEEEKATINIANVNRLRKLRKEEDEDLISGSEYVSRLRAQHVKLNPGT-DWAQI--------DSRSKIDRSSDD----ESDEENEAALNQGNKDVDDILRTNEDLVVKSSS----KLLPGHVEYSKLVDANIQDPSNGPINSVQFH-RNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPDGS-----QVILSGRRKFFYSFDLVKAKVDKVGPLVGREEKSLENFEVSPDSKLVAFVGNEGYIFLVSTKTKQLVSTLKMNGTVRSLAFAEDGQQLLSGGGDGQVYHWDLRTMTCMHKGVDEGCINSTALSTSPGGKLFAAGSDSGIVNIYNREEFLGGKR---------------KPIKTIENLTTKVDFMKFNHDSQILAICSGMKKSSLKLIHIPSYSVFSNWPPPNASLSYPRCLDFSPGGGFMAVGNSAGKVLLYKLHHYQ 552 The following BLAST results are available for this feature:
BLAST of EWM21880.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|