EWM21893.1, cds8781 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|553187522|ref|XP_005854628.1| (nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|553196359|ref|XP_005856326.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422292727|gb|EKU20029.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422294432|gb|EKU21732.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|585102238|gb|EWM21893.1| nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 457.603 bits (1176), Expect = 6.097e-163 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT 224
MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT
Sbjct: 1 MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT 224
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|299115121|emb|CBN75488.1| (ADP-ribose pyrophosphatase [Ectocarpus siliculosus]) HSP 1 Score: 184.496 bits (467), Expect = 3.242e-54 Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 0
Query: 47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEG--ARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWM--RLVVCDKEGTTVVKERGAQQVLCRLPTAS 212
F Y++PRP+VTVD L++ LDE + ILL++R N+PFKG WALPGGFVDQ+EGLD+AA REL EET + + + Q G YG PGRDPRGHTITVA+ A+ S ARAGDDA EA+FF LP +AFDH K+I ++W R + G V+++ + Q L T+S
Sbjct: 98 FRYQWPRPAVTVDCLIYALDEGKPWILLIKRKNDPFKGGWALPGGFVDQNEGLDAAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTITVAFMAWAPSKAACSARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSS 267
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1213262105|ref|WP_088655053.1| (NUDIX hydrolase [Geofilum sp. HF401]) HSP 1 Score: 164.851 bits (416), Expect = 2.417e-48 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 0
Query: 47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVV 187
+ Y YPRPSVT D ++ ILL+QR +P+KG WALPGGFVDQDE L++AA REL EET L+ S QVG +G+PGRDPRGHT+TVAY S ARAGDDAREA++F+ +LP LAFDH II RL +
Sbjct: 2 YSYAYPRPSVTADVVLLAGSGEDFFILLIQRAADPYKGCWALPGGFVDQDEDLEAAARRELLEETGLEVDSLVQVGAFGKPGRDPRGHTVTVAYATVWPSVVEARAGDDAREAQWFSLRALPELAFDHDAIIAAALERLAL 142
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1194433941|gb|OUC06915.1| (NUDIX hydrolase [Litorilinea aerophila]) HSP 1 Score: 161.77 bits (408), Expect = 6.039e-46 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 0
Query: 47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGA----RAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
+CY++PRP+VTVD ++F + Q+++LL+QR + PF+ WALPGGFV+ DE L++AA RELREET + + Q+ T+GQP RDPR ITVAY A L + + A R DAREA++++ +LPPLAFDH++IIE RL
Sbjct: 13 YCYEFPRPAVTVDIILFTFKDNQLQVLLIQRNHPPFEHMWALPGGFVEMDEDLEAAALRELREETNITDVYLEQLYTFGQPDRDPRTRVITVAYFALLSADQAARLQVRGQSDAREARWWSVYNLPPLAFDHRRIIEYAVQRL 155
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1160697015|ref|WP_079557272.1| (NUDIX hydrolase [Alkalitalea saponilacus] >gi|1154005778|emb|SKB92021.1| 8-oxo-dGTP diphosphatase [Alkalitalea saponilacus] >gi|1208604441|gb|ASB50152.1| NUDIX hydrolase [Alkalitalea saponilacus]) HSP 1 Score: 157.147 bits (396), Expect = 1.854e-45 Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 0
Query: 49 YKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEE 180
Y YPRPSVT D +VF + Q K+LL++R EPFKG WALPGGFVD++E L A REL EET L + Q+G YG+P RDPRGHTITVAY A AGDDA +A +F LP LAFDH II++
Sbjct: 4 YNYPRPSVTCDIVVFSVGIDQSKLLLIKRKFEPFKGLWALPGGFVDENEDLTDTALRELEEETGLSGVKVKQIGAYGKPNRDPRGHTITVAYLALTDVELELNAGDDAHDAAWFKIDELPELAFDHADIIQD 135
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|763250285|ref|WP_044118012.1| (NUDIX hydrolase [Alkaliflexus imshenetskii]) HSP 1 Score: 156.377 bits (394), Expect = 5.098e-45 Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = 0
Query: 47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIE 179
+ Y+YPRPSVT D ++ E ILL+QR +EP K WALPGGFVD++E L A REL EET ++ + Q+G +G+PGRDPRGHTIT+A+ + A AGDDA+ A++F LPPLAFDH +IIE
Sbjct: 3 YRYEYPRPSVTADVVLLAGSEGSQSILLIQRAHEPHKDMWALPGGFVDENEDLPDTAVRELFEETGIERVGLKQIGAFGKPGRDPRGHTITIAFLGIIPDRVLAVAGDDAKHAEWFPINELPPLAFDHHEIIE 135
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|505731608|ref|WP_015693578.1| (NUDIX hydrolase [Saprospira grandis] >gi|378576982|gb|AFC25983.1| NUDIX hydrolase [Saprospira grandis str. Lewin]) HSP 1 Score: 159.073 bits (401), Expect = 6.220e-45 Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 46 GFCYKYPRPSVTVDTLVFCLDET-QMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
+ Y+YPRPSVTVD +VF LD++ ++ILL++R ++PF G WALPGGFVD E LD AA REL EET + I Q+ T+G P RDPRG I+VAY A + LS +A DAR+AK+F LPPLAFDH K++E RL
Sbjct: 2 AYTYEYPRPSVTVDCVVFGLDDSADLRILLIERADDPFAGHWALPGGFVDMGEDLDLAAKRELEEETGIKDIFIEQLYTFGAPNRDPRGRVISVAYYALVNLSEHPIKAASDARQAKWFKISELPPLAFDHNKVLEMALERL 143
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1082367911|gb|OFX26602.1| (NUDIX hydrolase [Bacteroidetes bacterium GWA2_31_9b]) HSP 1 Score: 154.836 bits (390), Expect = 1.537e-44 Identity = 71/136 (52.21%), Postives = 93/136 (68.38%), Query Frame = 0
Query: 46 GFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEE 180
GF Y+Y RP+VTVD LVF + ++ILL++RG+EPFK WALPGGF++ DE L ++A REL EET + +I Q TYG+ GRDPRG T++V Y F+ E AGDDA E +F+ +P LAFDH IIE+
Sbjct: 2 GFNYEYARPAVTVDILVFSKTNSTIQILLIKRGHEPFKDKWALPGGFIEMDEELITSAYRELEEETGIKNIQLTQFKTYGKIGRDPRGRTVSVIYYGFINQEKEKIHAGDDASEVAWFSINKIPLLAFDHSDIIED 137
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|488733560|ref|WP_002656964.1| (NUDIX hydrolase [Saprospira grandis] >gi|395319261|gb|EJF52182.1| ADP-ribose pyrophosphatase [Saprospira grandis DSM 2844]) HSP 1 Score: 157.918 bits (398), Expect = 1.756e-44 Identity = 76/142 (53.52%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 46 GFCYKYPRPSVTVDTLVFCLDET-QMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
+ Y+YPRP+VTVD +VF LD++ ++ILL++R ++PF G WALPGGFVD E LD AA REL EET + I Q+ T+G P RDPRG I+VAY A + LS +A DAR+AK+F LPPLAFDH K++E RL
Sbjct: 2 AYTYEYPRPAVTVDCVVFGLDDSADLRILLIERADDPFAGHWALPGGFVDMGEDLDLAAKRELEEETGIKDIFIEQLYTFGAPNRDPRGRVISVAYYALVNLSEHPIKAASDARQAKWFKISELPPLAFDHNKVLEMALERL 143
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|159467369|ref|XP_001691864.1| (ADP-ribose pyrophosphatase [Chlamydomonas reinhardtii] >gi|158278591|gb|EDP04354.1| ADP-ribose pyrophosphatase [Chlamydomonas reinhardtii]) HSP 1 Score: 156.377 bits (394), Expect = 3.159e-44 Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 0
Query: 46 GFCYKYPRPSVTVDTLVFCLDETQM--KILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALD--SISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSE-GARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
Y+YPRP+VTVD + ++LL++R NEPFK WALPGGFVD++E LD AA REL+EET++D S+S QVG +G PGRDPRG TITVAY A + S+E G +A DDA++A++F +LP LAFDHK ++ + L
Sbjct: 26 AHTYQYPRPAVTVDAAIVARPSAAAPPQLLLIKRKNEPFKDCWALPGGFVDENESLDVAAGRELQEETSVDPASVSMTQVGAFGDPGRDPRGWTITVAYAALVPSTELGVKAADDAKDARWFDVSALPQLAFDHKLVVRSSLRHL 170 The following BLAST results are available for this feature:
BLAST of EWM21893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|