EWM21893.1, cds8781 (CDS) Nannochloropsis gaditana

Overview
NameEWM21893.1
Unique Namecds8781
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:226364..227038 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21893.1
Productnudix hydrolase
Orig transcript idgnl|cribi|Naga_100231g5.10124.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:226364..227038 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
Homology
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|553187522|ref|XP_005854628.1| (nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|553196359|ref|XP_005856326.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422292727|gb|EKU20029.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422294432|gb|EKU21732.1| nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|585102238|gb|EWM21893.1| nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 457.603 bits (1176), Expect = 6.097e-163
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query:    1 MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT 224
            MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT
Sbjct:    1 MPPLLPTLSRTLISAACLCFTAPSSFVLRPSSSRPASTAVGMAAQGFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVVCDKEGTTVVKERGAQQVLCRLPTASAAQVVRSSKPFT 224          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|299115121|emb|CBN75488.1| (ADP-ribose pyrophosphatase [Ectocarpus siliculosus])

HSP 1 Score: 184.496 bits (467), Expect = 3.242e-54
Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 0
Query:   47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEG--ARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWM--RLVVCDKEGTTVVKERGAQQVLCRLPTAS 212
            F Y++PRP+VTVD L++ LDE +  ILL++R N+PFKG WALPGGFVDQ+EGLD+AA REL EET + + +  Q G YG PGRDPRGHTITVA+ A+  S     ARAGDDA EA+FF    LP +AFDH K+I ++W   R    +  G   V+++ + Q L    T+S
Sbjct:   98 FRYQWPRPAVTVDCLIYALDEGKPWILLIKRKNDPFKGGWALPGGFVDQNEGLDAAARRELEEETGVTNRTMVQTGAYGDPGRDPRGHTITVAFMAWAPSKAACSARAGDDAAEARFFPVERLPSMAFDHLKVITDSWARCRFGATNDGGGVSVEDKASGQALGEYSTSS 267          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1213262105|ref|WP_088655053.1| (NUDIX hydrolase [Geofilum sp. HF401])

HSP 1 Score: 164.851 bits (416), Expect = 2.417e-48
Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 0
Query:   47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRLVV 187
            + Y YPRPSVT D ++         ILL+QR  +P+KG WALPGGFVDQDE L++AA REL EET L+  S  QVG +G+PGRDPRGHT+TVAY     S   ARAGDDAREA++F+  +LP LAFDH  II     RL +
Sbjct:    2 YSYAYPRPSVTADVVLLAGSGEDFFILLIQRAADPYKGCWALPGGFVDQDEDLEAAARRELLEETGLEVDSLVQVGAFGKPGRDPRGHTVTVAYATVWPSVVEARAGDDAREAQWFSLRALPELAFDHDAIIAAALERLAL 142          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1194433941|gb|OUC06915.1| (NUDIX hydrolase [Litorilinea aerophila])

HSP 1 Score: 161.77 bits (408), Expect = 6.039e-46
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 0
Query:   47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGA----RAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
            +CY++PRP+VTVD ++F   + Q+++LL+QR + PF+  WALPGGFV+ DE L++AA RELREET +  +   Q+ T+GQP RDPR   ITVAY A L + + A    R   DAREA++++  +LPPLAFDH++IIE    RL
Sbjct:   13 YCYEFPRPAVTVDIILFTFKDNQLQVLLIQRNHPPFEHMWALPGGFVEMDEDLEAAALRELREETNITDVYLEQLYTFGQPDRDPRTRVITVAYFALLSADQAARLQVRGQSDAREARWWSVYNLPPLAFDHRRIIEYAVQRL 155          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1160697015|ref|WP_079557272.1| (NUDIX hydrolase [Alkalitalea saponilacus] >gi|1154005778|emb|SKB92021.1| 8-oxo-dGTP diphosphatase [Alkalitalea saponilacus] >gi|1208604441|gb|ASB50152.1| NUDIX hydrolase [Alkalitalea saponilacus])

HSP 1 Score: 157.147 bits (396), Expect = 1.854e-45
Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 0
Query:   49 YKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEE 180
            Y YPRPSVT D +VF +   Q K+LL++R  EPFKG WALPGGFVD++E L   A REL EET L  +   Q+G YG+P RDPRGHTITVAY A         AGDDA +A +F    LP LAFDH  II++
Sbjct:    4 YNYPRPSVTCDIVVFSVGIDQSKLLLIKRKFEPFKGLWALPGGFVDENEDLTDTALRELEEETGLSGVKVKQIGAYGKPNRDPRGHTITVAYLALTDVELELNAGDDAHDAAWFKIDELPELAFDHADIIQD 135          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|763250285|ref|WP_044118012.1| (NUDIX hydrolase [Alkaliflexus imshenetskii])

HSP 1 Score: 156.377 bits (394), Expect = 5.098e-45
Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = 0
Query:   47 FCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIE 179
            + Y+YPRPSVT D ++    E    ILL+QR +EP K  WALPGGFVD++E L   A REL EET ++ +   Q+G +G+PGRDPRGHTIT+A+   +     A AGDDA+ A++F    LPPLAFDH +IIE
Sbjct:    3 YRYEYPRPSVTADVVLLAGSEGSQSILLIQRAHEPHKDMWALPGGFVDENEDLPDTAVRELFEETGIERVGLKQIGAFGKPGRDPRGHTITIAFLGIIPDRVLAVAGDDAKHAEWFPINELPPLAFDHHEIIE 135          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|505731608|ref|WP_015693578.1| (NUDIX hydrolase [Saprospira grandis] >gi|378576982|gb|AFC25983.1| NUDIX hydrolase [Saprospira grandis str. Lewin])

HSP 1 Score: 159.073 bits (401), Expect = 6.220e-45
Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 0
Query:   46 GFCYKYPRPSVTVDTLVFCLDET-QMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
             + Y+YPRPSVTVD +VF LD++  ++ILL++R ++PF G WALPGGFVD  E LD AA REL EET +  I   Q+ T+G P RDPRG  I+VAY A + LS    +A  DAR+AK+F    LPPLAFDH K++E    RL
Sbjct:    2 AYTYEYPRPSVTVDCVVFGLDDSADLRILLIERADDPFAGHWALPGGFVDMGEDLDLAAKRELEEETGIKDIFIEQLYTFGAPNRDPRGRVISVAYYALVNLSEHPIKAASDARQAKWFKISELPPLAFDHNKVLEMALERL 143          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|1082367911|gb|OFX26602.1| (NUDIX hydrolase [Bacteroidetes bacterium GWA2_31_9b])

HSP 1 Score: 154.836 bits (390), Expect = 1.537e-44
Identity = 71/136 (52.21%), Postives = 93/136 (68.38%), Query Frame = 0
Query:   46 GFCYKYPRPSVTVDTLVFCLDETQMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEE 180
            GF Y+Y RP+VTVD LVF    + ++ILL++RG+EPFK  WALPGGF++ DE L ++A REL EET + +I   Q  TYG+ GRDPRG T++V Y  F+    E   AGDDA E  +F+   +P LAFDH  IIE+
Sbjct:    2 GFNYEYARPAVTVDILVFSKTNSTIQILLIKRGHEPFKDKWALPGGFIEMDEELITSAYRELEEETGIKNIQLTQFKTYGKIGRDPRGRTVSVIYYGFINQEKEKIHAGDDASEVAWFSINKIPLLAFDHSDIIED 137          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|488733560|ref|WP_002656964.1| (NUDIX hydrolase [Saprospira grandis] >gi|395319261|gb|EJF52182.1| ADP-ribose pyrophosphatase [Saprospira grandis DSM 2844])

HSP 1 Score: 157.918 bits (398), Expect = 1.756e-44
Identity = 76/142 (53.52%), Postives = 98/142 (69.01%), Query Frame = 0
Query:   46 GFCYKYPRPSVTVDTLVFCLDET-QMKILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALDSISFAQVGTYGQPGRDPRGHTITVAYTAFL-LSSEGARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
             + Y+YPRP+VTVD +VF LD++  ++ILL++R ++PF G WALPGGFVD  E LD AA REL EET +  I   Q+ T+G P RDPRG  I+VAY A + LS    +A  DAR+AK+F    LPPLAFDH K++E    RL
Sbjct:    2 AYTYEYPRPAVTVDCVVFGLDDSADLRILLIERADDPFAGHWALPGGFVDMGEDLDLAAKRELEEETGIKDIFIEQLYTFGAPNRDPRGRVISVAYYALVNLSEHPIKAASDARQAKWFKISELPPLAFDHNKVLEMALERL 143          
BLAST of EWM21893.1 vs. NCBI_GenBank
Match: gi|159467369|ref|XP_001691864.1| (ADP-ribose pyrophosphatase [Chlamydomonas reinhardtii] >gi|158278591|gb|EDP04354.1| ADP-ribose pyrophosphatase [Chlamydomonas reinhardtii])

HSP 1 Score: 156.377 bits (394), Expect = 3.159e-44
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 0
Query:   46 GFCYKYPRPSVTVDTLVFCLDETQM--KILLVQRGNEPFKGAWALPGGFVDQDEGLDSAAARELREETALD--SISFAQVGTYGQPGRDPRGHTITVAYTAFLLSSE-GARAGDDAREAKFFAFGSLPPLAFDHKKIIEETWMRL 185
               Y+YPRP+VTVD  +          ++LL++R NEPFK  WALPGGFVD++E LD AA REL+EET++D  S+S  QVG +G PGRDPRG TITVAY A + S+E G +A DDA++A++F   +LP LAFDHK ++  +   L
Sbjct:   26 AHTYQYPRPAVTVDAAIVARPSAAAPPQLLLIKRKNEPFKDCWALPGGFVDENESLDVAAGRELQEETSVDPASVSMTQVGAFGDPGRDPRGWTITVAYAALVPSTELGVKAADDAKDARWFDVSALPQLAFDHKLVVRSSLRHL 170          
The following BLAST results are available for this feature:
BLAST of EWM21893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553187522|ref|XP_005854628.1|6.097e-163100.00nudix hydrolase [Nannochloropsis gaditana CCMP526]... [more]
gi|299115121|emb|CBN75488.1|3.242e-5452.94ADP-ribose pyrophosphatase [Ectocarpus siliculosus... [more]
gi|1213262105|ref|WP_088655053.1|2.417e-4856.74NUDIX hydrolase [Geofilum sp. HF401][more]
gi|1194433941|gb|OUC06915.1|6.039e-4651.05NUDIX hydrolase [Litorilinea aerophila][more]
gi|1160697015|ref|WP_079557272.1|1.854e-4556.06NUDIX hydrolase [Alkalitalea saponilacus] >gi|1154... [more]
gi|763250285|ref|WP_044118012.1|5.098e-4552.63NUDIX hydrolase [Alkaliflexus imshenetskii][more]
gi|505731608|ref|WP_015693578.1|6.220e-4554.23NUDIX hydrolase [Saprospira grandis] >gi|378576982... [more]
gi|1082367911|gb|OFX26602.1|1.537e-4452.21NUDIX hydrolase [Bacteroidetes bacterium GWA2_31_9... [more]
gi|488733560|ref|WP_002656964.1|1.756e-4453.52NUDIX hydrolase [Saprospira grandis] >gi|395319261... [more]
gi|159467369|ref|XP_001691864.1|3.159e-4452.41ADP-ribose pyrophosphatase [Chlamydomonas reinhard... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8811rna8811Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications