EWM21898.1, cds8779 (CDS) Nannochloropsis gaditana

Overview
NameEWM21898.1
Unique Namecds8779
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:220988..223816 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21898.1
Productlysine-specific demethylase 4c isoform 1
Orig transcript idgnl|cribi|Naga_100231g8.10129.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:220988..223816 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR003347JmjC_dom
IPR003349JmjN
Homology
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|585102243|gb|EWM21898.1| (lysine-specific demethylase 4c isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 1951.02 bits (5053), Expect = 0.000e+0
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0
Query:    1 MSSTTCPVFRPSREEFKNFSAYIDKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAADQARVEALPNKTSKIDRKKILRRLSYIGWMAWREQEEEARRVEEALAVKERQRLQREQTNLRRKEKVRRLNGGTLSLTVGEGEGGGDGQSAEDSEERVGGDEGEDEEDGGPARQGLEVDLAAQKQWDFRCRCGVAATSGAPVQSWPKGAIFQCAGCLAWSHTRCLYSKDHAPRRAFCAGCHQVLQRLEASGADWPTGRRIKLRSKVVVCRGPRGLEEGSVTMIGEGMARVYFKGMKKPRKRDRAGAPGETWPKALKRPMEEWVNVMSSRFLSRERVQAALGQFSLQSIPTQDCAISESIKMQTPQPQKIKLEQGLYHHGDVATSAGHCCRDQVISASSLRGSGAAQPPANTKRGMAPHPAPLLRGVPLPDAQAAVRHAKFQKDLARSKKAFRSLFSPTRNAEAVPGVSYSRYHAAHNASIFDGEWSDDEEGERKVLEEQCRGLPLGNGDLAGGLNGGRGCGSAHDDLSNGGHVLPKCRGTDGATERAQEPPANSCALAQGAHVPSSSACLYPLQQHHEGAQCGALKCPHQPSSTRPSTESSIKNASLDVSGEGSSSVAASRVSTVYECRTGTGNCANIKLTSMDCGQGLRNAGVPAMGPGAVGATAGTVGASRGILGRGR 942
            MSSTTCPVFRPSREEFKNFSAYIDKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAADQARVEALPNKTSKIDRKKILRRLSYIGWMAWREQEEEARRVEEALAVKERQRLQREQTNLRRKEKVRRLNGGTLSLTVGEGEGGGDGQSAEDSEERVGGDEGEDEEDGGPARQGLEVDLAAQKQWDFRCRCGVAATSGAPVQSWPKGAIFQCAGCLAWSHTRCLYSKDHAPRRAFCAGCHQVLQRLEASGADWPTGRRIKLRSKVVVCRGPRGLEEGSVTMIGEGMARVYFKGMKKPRKRDRAGAPGETWPKALKRPMEEWVNVMSSRFLSRERVQAALGQFSLQSIPTQDCAISESIKMQTPQPQKIKLEQGLYHHGDVATSAGHCCRDQVISASSLRGSGAAQPPANTKRGMAPHPAPLLRGVPLPDAQAAVRHAKFQKDLARSKKAFRSLFSPTRNAEAVPGVSYSRYHAAHNASIFDGEWSDDEEGERKVLEEQCRGLPLGNGDLAGGLNGGRGCGSAHDDLSNGGHVLPKCRGTDGATERAQEPPANSCALAQGAHVPSSSACLYPLQQHHEGAQCGALKCPHQPSSTRPSTESSIKNASLDVSGEGSSSVAASRVSTVYECRTGTGNCANIKLTSMDCGQGLRNAGVPAMGPGAVGATAGTVGASRGILGRGR
Sbjct:    1 MSSTTCPVFRPSREEFKNFSAYIDKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAADQARVEALPNKTSKIDRKKILRRLSYIGWMAWREQEEEARRVEEALAVKERQRLQREQTNLRRKEKVRRLNGGTLSLTVGEGEGGGDGQSAEDSEERVGGDEGEDEEDGGPARQGLEVDLAAQKQWDFRCRCGVAATSGAPVQSWPKGAIFQCAGCLAWSHTRCLYSKDHAPRRAFCAGCHQVLQRLEASGADWPTGRRIKLRSKVVVCRGPRGLEEGSVTMIGEGMARVYFKGMKKPRKRDRAGAPGETWPKALKRPMEEWVNVMSSRFLSRERVQAALGQFSLQSIPTQDCAISESIKMQTPQPQKIKLEQGLYHHGDVATSAGHCCRDQVISASSLRGSGAAQPPANTKRGMAPHPAPLLRGVPLPDAQAAVRHAKFQKDLARSKKAFRSLFSPTRNAEAVPGVSYSRYHAAHNASIFDGEWSDDEEGERKVLEEQCRGLPLGNGDLAGGLNGGRGCGSAHDDLSNGGHVLPKCRGTDGATERAQEPPANSCALAQGAHVPSSSACLYPLQQHHEGAQCGALKCPHQPSSTRPSTESSIKNASLDVSGEGSSSVAASRVSTVYECRTGTGNCANIKLTSMDCGQGLRNAGVPAMGPGAVGATAGTVGASRGILGRGR 942          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|635368841|emb|CCI43005.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 333.183 bits (853), Expect = 1.709e-100
Identity = 159/326 (48.77%), Postives = 217/326 (66.56%), Query Frame = 0
Query:    3 STTCPVFRPSREEFKNFSAYI-DKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVP-PIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKT---EPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRA-SGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAA 322
            +T CPVF PS+E+F +FS+YI ++I+ +  + G+CKI+PP+GW        F   + +   VV  P+ Q V+G +GV+ + L++ K +  ++F+ +A +    EP       EIER FW++M     PP+YGAD+ GSLF   + S WNL+EL  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPPHA   FE  AQ++ P+ + +C +FLRHK S+ SP  L+  GIP +  +Q  GEFV+TFP +YH+GFN GFNIAEA NF+T RW+  G  A+VC+C P SV I+MDDF   L +   A
Sbjct:    9 ATICPVFYPSQEQFTSFSSYIREEIEPKCSHIGICKIVPPKGW--------FIRNYDDIDYVVEHPVSQHVAGKKGVFNIDLVERKSLTAQEFKEIAAQCTDGEPQDLSKMDEIERAFWKNMRSTMDPPIYGADIEGSLFDSSSNSTWNLNELKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASTFERAAQAIYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKTLQSEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWIPFGLRARVCKCSPESVRIDMDDFLTSLFSSEIA 324          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|325184198|emb|CCA18657.1| (hypothetical protein TRIADDRAFT_27796 [Albugo laibachii Nc14])

HSP 1 Score: 327.405 bits (838), Expect = 1.875e-98
Identity = 155/321 (48.29%), Postives = 214/321 (66.67%), Query Frame = 0
Query:    2 SSTTCPVFRPSREEFKNFSAYI-DKIDSRVGNAGLCKIIPPEGWY-DTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKT---EPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRA-SGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            ++T CPVF PS+E+F +FS+YI  +++ +  + G+CKI+PP+GW+     + +F        +V  P+ Q V+G +GV+ + L++ K +  ++F+ +A +    EP       EIER FW+SM      P+YGAD+ GSLF     S WNL++L  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPPHA   FE  AQ++ P+ + +C +FLRHK S+ SP  L+  GIP +  +Q  GEFV+TFP +YH+GFN GFNIAEA NF+T RW+  G  A+VC+C P SV I+MDDF   L
Sbjct:    8 NATNCPVFYPSQEQFTSFSSYIRQEVEPKCSDIGICKIVPPKGWFIRNYDDVDF--------VVEHPVSQHVAGKKGVFNIDLVEKKSLTAQEFKEIAAQCSDGEPRDLFKMDEIERAFWKSMRSTMDAPIYGADIEGSLFDSSCNSTWNLNDLKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASAFERAAQAMYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKTLQSEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWVPFGLRARVCKCSPESVRIDMDDFLISL 318          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|953492749|emb|CEG44695.1| (DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Plasmopara halstedii])

HSP 1 Score: 326.25 bits (835), Expect = 2.884e-97
Identity = 149/316 (47.15%), Postives = 212/316 (67.09%), Query Frame = 0
Query:    6 CPVFRPSREEFKNFSAYIDKI-DSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAK---KTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRD-RASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            CPV+ P+  EF++F+ YI  + + +  N G+CK+IPP GW+    +         +  V  P+ Q V+G +G++ + L++ K M+ ++F A+A      EP       ++ER FW+ +     PP+YGAD+  SLF D  A  WNL++L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY +PPHA  + E  AQS+ P+ +  C++FLRHKTS+ SP  L+E G+PF    Q+PGEFV+TFPA+YH GFN GFNIAEA NF+T  W+  G +AK+C+C P SV I+MD F  +L
Sbjct:   17 CPVYYPTHTEFQSFATYIRTVVEPQCANIGICKVIPPSGWFSRSYDIS-----QLKCQVKAPVCQHVAGKKGIFNVDLVERKSMSPEEFHAVANVANNQEPKDNDDLLDVERRFWKGLRGTMDPPIYGADIVASLFGDADALSWNLNDLNTILRTI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYLHTGKPKFWYGVPPHAATQLERAAQSMFPEKYHECTQFLRHKTSLISPARLKEFGVPFFRACQKPGEFVITFPATYHQGFNFGFNIAEAVNFATLHWIPYGLKAKICKCHPDSVRIDMDSFLMRL 325          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|325184199|emb|CCA18660.1| (hypothetical protein TRIADDRAFT_27796 [Albugo laibachii Nc14])

HSP 1 Score: 321.627 bits (823), Expect = 3.477e-96
Identity = 154/327 (47.09%), Postives = 215/327 (65.75%), Query Frame = 0
Query:    2 SSTTCPVFRPSREEFKNFSAYI-DKIDSRVGNAGLCKIIPPEGWY-DTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKT---EPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRA-SGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFH------TLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            ++T CPVF PS+E+F +FS+YI  +++ +  + G+CKI+PP+GW+     + +F        +V  P+ Q V+G +GV+ + L++ K +  ++F+ +A +    EP       EIER FW+SM      P+YGAD+ GSLF     S WNL++L  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPPHA   FE  AQ++ P+ + +C +FLRHK S+ SP  L+  GIP +      + ++  GEFV+TFP +YH+GFN GFNIAEA NF+T RW+  G  A+VC+C P SV I+MDDF   L
Sbjct:    8 NATNCPVFYPSQEQFTSFSSYIRQEVEPKCSDIGICKIVPPKGWFIRNYDDVDF--------VVEHPVSQHVAGKKGVFNIDLVEKKSLTAQEFKEIAAQCSDGEPRDLFKMDEIERAFWKSMRSTMDAPIYGADIEGSLFDSSCNSTWNLNDLKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASAFERAAQAMYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKVGNALSFIESEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWVPFGLRARVCKCSPESVRIDMDDFLISL 324          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|669144752|ref|XP_008607938.1| (hypothetical protein SDRG_04063 [Saprolegnia diclina VS20] >gi|530740104|gb|EQC38346.1| hypothetical protein SDRG_04063 [Saprolegnia diclina VS20])

HSP 1 Score: 318.931 bits (816), Expect = 3.075e-95
Identity = 157/332 (47.29%), Postives = 212/332 (63.86%), Query Frame = 0
Query:    2 SSTTCPVFRPSREEFKNFSAYI-DKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALA-KKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRA--SGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAADQARVEA 329
            S    PVFRP+  EF +F  YI   ++ +    GLCKI+PP GW      A   G       +  P+ Q V+G +GV+ + L++ K M +  F+ALA  K      +    IER FW+ + P   PP+YGAD+ GSLF+D A  + WN++ LD +++ +  +LPG+T AMLYFGMWRAMFA HTEDM+LYSIN+LH GRPK WY IPP +  + E +AQSL P+   TC +FLRHKTS+ +P  LRE  +PF+ +VQ PGEFV+TFP SYH GFN GFNIAE+ NF+T RW+  GR AK+C C P  V I++D F   + +   +D+   +A
Sbjct:   18 SMVDAPVFRPTPSEFASFPRYIRTVVEPQCQTIGLCKIVPPLGWV-----ARASGYDNVAFDIHTPLSQHVAGKKGVFNVDLVERKSMTLDAFKALAVAKDTVTHLLDDDAIERAFWKGLRPTMEPPVYGADLVGSLFQDDALSNPWNVNNLDTILRSV--DLPGVTQAMLYFGMWRAMFALHTEDMDLYSINFLHTGRPKFWYGIPPQSAAKLERVAQSLFPEKDMTCHQFLRHKTSLIAPTKLREHSVPFYKVVQRPGEFVITFPGSYHQGFNMGFNIAESVNFATLRWVGLGRAAKLCHCVPGQVRIDLDAFVHSIFSSPGSDRLDADA 342          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|568048247|gb|ETM45306.1| (hypothetical protein L914_09600 [Phytophthora parasitica])

HSP 1 Score: 319.316 bits (817), Expect = 1.482e-94
Identity = 149/316 (47.15%), Postives = 209/316 (66.14%), Query Frame = 0
Query:    6 CPVFRPSREEFKNFSAYIDKI-DSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQAL---AKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRD-RASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            CP F P+R EF++F+ YI  + + +  N G+CK+IPP GW+    +            V  P+ Q V+G +G++ + L++ K M+  +FQA+   A   EP+      E+ER FW+ +     PP YGAD+  +LF D  A  WNL++L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP A  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGEF++TFPA+YH GFN GFNIAEA NF+T  W+  G +AKVC+C P SV I+MD F  K+
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDIS-----QLDCQVRAPVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFSDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKVCKCLPDSVRIDMDSFLTKI 330          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|570983608|gb|ETP43407.1| (hypothetical protein F442_09836 [Phytophthora parasitica P10297])

HSP 1 Score: 318.931 bits (816), Expect = 1.982e-94
Identity = 149/316 (47.15%), Postives = 209/316 (66.14%), Query Frame = 0
Query:    6 CPVFRPSREEFKNFSAYIDKI-DSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQAL---AKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRD-RASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            CP F P+R EF++F+ YI  + + +  N G+CK+IPP GW+    +            V  P+ Q V+G +G++ + L++ K M+  +FQA+   A   EP+      E+ER FW+ +     PP YGAD+  +LF D  A  WNL++L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP A  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGEF++TFPA+YH GFN GFNIAEA NF+T  W+  G +AK+C+C P SV I+MD F  KL
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDIS-----QLDCQVRAPVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFGDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKICKCLPDSVRIDMDSFLTKL 330          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|566022596|gb|ETI45507.1| (hypothetical protein F443_09933 [Phytophthora parasitica P1569])

HSP 1 Score: 318.161 bits (814), Expect = 3.230e-94
Identity = 149/316 (47.15%), Postives = 209/316 (66.14%), Query Frame = 0
Query:    6 CPVFRPSREEFKNFSAYIDKI-DSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQAL---AKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRD-RASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            CP F P+R EF++F+ YI  + + +  N G+CK+IPP GW+    +            V  P+ Q V+G +G++ + L++ K M+  +FQA+   A   EP+      E+ER FW+ +     PP YGAD+  +LF D  A  WNL++L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP A  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGEF++TFPA+YH GFN GFNIAEA NF+T  W+  G +AKVC+C P SV I+MD F  K+
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDIS-----QLDCQVRAPVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFGDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKVCKCLPDSVRIDMDSFLTKI 330          
BLAST of EWM21898.1 vs. NCBI_GenBank
Match: gi|570326220|gb|ETO74168.1| (hypothetical protein F444_10028 [Phytophthora parasitica P1976])

HSP 1 Score: 317.775 bits (813), Expect = 4.745e-94
Identity = 148/316 (46.84%), Postives = 209/316 (66.14%), Query Frame = 0
Query:    6 CPVFRPSREEFKNFSAYIDKI-DSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQAL---AKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRD-RASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 316
            CP F P+R EF++F+ YI  + + +  N G+CK+IPP GW+    +            V  P+ Q V+G +G++ + L++ K M+  +FQA+   A   EP+      E+ER FW+ +     PP YGAD+  +LF D  A  WNL++L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP A  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGEF++TFPA+YH GFN GFNIAEA NF+T  W+  G +AK+C+C P SV I+MD F  K+
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDIS-----QLDCQVRAPVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFGDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKICKCLPDSVRIDMDSFLTKI 330          
The following BLAST results are available for this feature:
BLAST of EWM21898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102243|gb|EWM21898.1|0.000e+0100.00lysine-specific demethylase 4c isoform 1 [Nannochl... [more]
gi|635368841|emb|CCI43005.1|1.709e-10048.77unnamed protein product [Albugo candida][more]
gi|325184198|emb|CCA18657.1|1.875e-9848.29hypothetical protein TRIADDRAFT_27796 [Albugo laib... [more]
gi|953492749|emb|CEG44695.1|2.884e-9747.15DNA damage-responsive repressor GIS1/RPH1, jumonji... [more]
gi|325184199|emb|CCA18660.1|3.477e-9647.09hypothetical protein TRIADDRAFT_27796 [Albugo laib... [more]
gi|669144752|ref|XP_008607938.1|3.075e-9547.29hypothetical protein SDRG_04063 [Saprolegnia dicli... [more]
gi|568048247|gb|ETM45306.1|1.482e-9447.15hypothetical protein L914_09600 [Phytophthora para... [more]
gi|570983608|gb|ETP43407.1|1.982e-9447.15hypothetical protein F442_09836 [Phytophthora para... [more]
gi|566022596|gb|ETI45507.1|3.230e-9447.15hypothetical protein F443_09933 [Phytophthora para... [more]
gi|570326220|gb|ETO74168.1|4.745e-9446.84hypothetical protein F444_10028 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8809rna8809Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications