EWM21900.1, cds8774 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|585102246|gb|EWM21900.1| (Mitochondrial biogenesis protein AIM24, partial [Nannochloropsis gaditana]) HSP 1 Score: 775.007 bits (2000), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 MLVRALLRTGNRGTHCAQRAHGTGHPLITRCVIRRPASPSLAMLAGPAGCASRSIFSMLSGADRTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLGVPIGMGAGGGGGEGEGEGEGEGQAGGEGADASSAAAAGAGLGGTSSGMSSGGVSEGTVPGSSGSEEVWGEERGGPA 396
MLVRALLRTGNRGTHCAQRAHGTGHPLITRCVIRRPASPSLAMLAGPAGCASRSIFSMLSGADRTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLGVPIGMGAGGGGGEGEGEGEGEGQAGGEGADASSAAAAGAGLGGTSSGMSSGGVSEGTVPGSSGSEEVWGEERGGPA
Sbjct: 1 MLVRALLRTGNRGTHCAQRAHGTGHPLITRCVIRRPASPSLAMLAGPAGCASRSIFSMLSGADRTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLGVPIGMGAGGGGGEGEGEGEGEGQAGGEGADASSAAAAGAGLGGTSSGMSSGGVSEGTVPGSSGSEEVWGEERGGPA 396
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|224006938|ref|XP_002292429.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972071|gb|EED90404.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 320.087 bits (819), Expect = 4.720e-104 Identity = 150/243 (61.73%), Postives = 193/243 (79.42%), Query Frame = 0
Query: 82 PIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPR-GGLGLGVPI 323
PIDFD+AS +EG E+QIV + LEP QVLRAE+G+++YMT GV + T+ GGG+SAG +R++TG+N+FISD+ Y G G G VALG++FPSKI+R++L +YGG +ICQKGA LC +H +++EFT+ F GFFGGEGFVLQ LTG GD +KAGG LIR++L EGE+LRV+SG LVGF V+YDV M+ G KNV+FGGEGLF+TTL GPG V+LQ MP R+++ IA RVP GG+GL VPI
Sbjct: 74 PIDFDIASSIEGKESQIVTIRLEPNQVLRAESGAMMYMTSGVSMNTTTGGGMSAGFQRFLTGQNVFISDYTYDGSNGPFGFVALGSDFPSKIVRLSLDEYGGKVICQKGALLCASHTVDIQVEFTKKFSTGFFGGEGFVLQGLTGTGDVLVKAGGTLIRKDLKEGESLRVSSGCLVGFQQGVEYDVAMVPGFKNVLFGGEGLFLTTLKGPGTVWLQGMPPQRMISEIARRVPSGGGIGLAVPI 316
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|568012427|gb|ETL86605.1| (hypothetical protein L917_13997 [Phytophthora parasitica] >gi|570975798|gb|ETP37731.1| hypothetical protein F442_14499 [Phytophthora parasitica P10297]) HSP 1 Score: 322.783 bits (826), Expect = 9.148e-104 Identity = 153/256 (59.77%), Postives = 190/256 (74.22%), Query Frame = 0
Query: 64 RTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADY-GGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLG 318
T + E D PIDFD A +EG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+ GG G+KR MTGEN F+S F YHG E G VALGT FPSKI+ + L+D+ GGS+ICQKGAFLCG+ +EMEF + F GFFGGEGF+LQRLTG GD ++A G LI REL GE LR++SG LV F PSV YD+ M+KG KNV+FGGEGLFVTTLTGPG ++LQS+PF+RVV +A+R+PRGG G
Sbjct: 86 NTATVPHHENTDNEVFV-PIDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPRGGPG 338
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|566016846|gb|ETI39757.1| (hypothetical protein F443_14679 [Phytophthora parasitica P1569] >gi|567954297|gb|ETK79935.1| hypothetical protein L915_14300 [Phytophthora parasitica] >gi|567982919|gb|ETL33321.1| hypothetical protein L916_14205 [Phytophthora parasitica] >gi|568042441|gb|ETM39770.1| hypothetical protein L914_14123 [Phytophthora parasitica] >gi|570320550|gb|ETO68498.1| hypothetical protein F444_14685 [Phytophthora parasitica P1976] >gi|570944407|gb|ETP09664.1| hypothetical protein F441_14539 [Phytophthora parasitica CJ01A1] >gi|970643598|gb|KUF84788.1| hypothetical protein AM587_10007959 [Phytophthora nicotianae] >gi|970653351|gb|KUF91837.1| hypothetical protein AM587_10011490 [Phytophthora nicotianae]) HSP 1 Score: 319.316 bits (817), Expect = 2.186e-102 Identity = 150/252 (59.52%), Postives = 187/252 (74.21%), Query Frame = 0
Query: 64 RTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADY-GGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPR 314
T + E D PIDFD A +EG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+ GG G+KR MTGEN F+S F YHG E G VALGT FPSKI+ + L+D+ GGS+ICQKGAFLCG+ +EMEF + F GFFGGEGF+LQRLTG GD ++A G LI REL GE LR++SG LV F PSV YD+ M+KG KNV+FGGEGLFVTTLTGPG ++LQS+PF+RVV +A+R+PR
Sbjct: 86 NTATVPHHENTDNEVFV-PIDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPR 334
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|675202991|ref|XP_008910380.1| (hypothetical protein PPTG_15112 [Phytophthora parasitica INRA-310] >gi|568089611|gb|ETN04453.1| hypothetical protein PPTG_15112 [Phytophthora parasitica INRA-310]) HSP 1 Score: 316.235 bits (809), Expect = 3.171e-101 Identity = 152/269 (56.51%), Postives = 192/269 (71.38%), Query Frame = 0
Query: 59 LSGADRTRALAKKEAEDQTALAKP------------IDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADY-GGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPR 314
++ A T AKK+ + P IDFD A +EG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+ GG G+KR MTGEN F+S F YHG E G VALGT FPSKI+ + L+D+ GGS+ICQKGAFLCG+ +EMEF + F GFFGGEGF+LQRLTG GD ++A G LI REL GE LR++SG LV F PSV YD+ M+KG KNV+FGGEGLFVTTLTGPG ++LQS+PF+RVV +A+R+PR
Sbjct: 68 VAAAKSTEPEAKKDENEANTATVPHHENTDNEVFVLIDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPR 334
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|1210512886|dbj|GAX28028.1| (hypothetical protein FisN_2Hh154 [Fistulifera solaris]) HSP 1 Score: 307.76 bits (787), Expect = 9.274e-100 Identity = 145/240 (60.42%), Postives = 188/240 (78.33%), Query Frame = 0
Query: 81 KPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLG 320
+PIDFD+A+++EG E+QIV ++L P QVLRAE+G+++Y+T+GVE+ T+ GGGLSAG +R MTG+N FISD+ Y G + G VALGT+FPSKI+R+ + +YGG L+CQKGA LC +H ++MEFT+SF GFFGGEGF+LQ LTG GD F+KAGG LIRR+L +GE LR++SG LV F V YDV+M+KG NV GGEGLF+TTL GPG V+LQ P R+++ IA RVP GG GLG
Sbjct: 44 EPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYSG--NTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFASGFFGGEGFILQALTGQGDVFLKAGGTLIRRDLRDGEELRISSGCLVAFTSQVDYDVQMVKGFANVFAGGEGLFITTLKGPGTVWLQGQPPQRMISEIARRVPAGG-GLG 280
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|1210516066|dbj|GAX24882.1| (hypothetical protein FisN_2Lh154 [Fistulifera solaris]) HSP 1 Score: 305.449 bits (781), Expect = 7.736e-99 Identity = 144/240 (60.00%), Postives = 187/240 (77.92%), Query Frame = 0
Query: 81 KPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLG 320
+PIDFD+A+++EG E+QIV ++L P QVLRAE+G+++Y+T+GVE+ T+ GGGLSAG +R MTG+N FISD+ Y G + G VALGT+FPSKI+R+ + +YGG L+CQKGA LC +H ++MEFT+SF GFFGGEGF+LQ LTG GD F+KAGG LIRR+L GE LR++SG LV F + YDV+M+KG NV GGEGLF+TTL GPG V+LQ P R+++ IA RVP GG GLG
Sbjct: 46 EPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTG--NTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFTSGFFGGEGFILQALTGEGDVFLKAGGTLIRRDLRAGEELRISSGCLVAFTSQIDYDVQMVKGFANVFAGGEGLFITTLKGPGTVWLQGQPPQRMISEIARRVPAGG-GLG 282
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|219129648|ref|XP_002184995.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403490|gb|EEC43442.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 289.656 bits (740), Expect = 7.523e-94 Identity = 134/224 (59.82%), Postives = 176/224 (78.57%), Query Frame = 0
Query: 90 RVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVP 313
+VEG E+QI+ V LEPGQVLRAE+G+++YMTDGV++ T+ GGGLS+G +R +TG+N FISD+ + G G+ G VALGT+FPSKI+R+ L +YGG ++CQKGA LC +H ++ME++++ GFFGGEGFVLQ L+G GD F+KAGG LIRR+L EGE LR++SG LV F V YDV+M+KG NV GGEGLF+TTLTGPG V+LQ P R+++ IA RVP
Sbjct: 1 KVEGNESQILTVALEPGQVLRAESGAMMYMTDGVQMNTTSGGGLSSGFQRMLTGQNFFISDYSFEGEPGTVGHVALGTDFPSKIVRLNLEEYGGKIVCQKGALLCASHTVDIQMEYSKNMSTGFFGGEGFVLQGLSGEGDVFVKAGGTLIRRDLKEGEQLRISSGCLVAFTNGVDYDVQMVKGFANVFAGGEGLFMTTLTGPGVVWLQGQPAQRMISEIARRVP 224
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|698805666|ref|XP_009835862.1| (hypothetical protein H257_10849 [Aphanomyces astaci] >gi|574109271|gb|ETV74775.1| hypothetical protein H257_10849 [Aphanomyces astaci]) HSP 1 Score: 296.204 bits (757), Expect = 1.557e-93 Identity = 150/251 (59.76%), Postives = 195/251 (77.69%), Query Frame = 0
Query: 72 EAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGGLGLGVP 322
A ++ + PIDF A+++ G E+Q+V + LEP Q LRAE+G+++YMTDGV L+T GG+ GLKR MTGEN F++++ Y G +SG V LGT PSKI+ + LAD+GGSLICQKGAF+ G+H G+EMEFT++F GFFGG+GF+LQRLTG GDAF++A GALI R L+ GE LR++SGSLV F P+V +D++ ++GVKN+MF GEGLFVTTLTGPG VFLQ MPFDR+V+ IASRVP GG + VP
Sbjct: 97 NAVEEAVVYTPIDFSKAAQIVGQESQLVHITLEPNQKLRAESGAMIYMTDGVHLDTHTAGGVQQGLKRMMTGENFFVTEYTYTG--TTSGQVCLGTSVPSKIVHMNLADFGGSLICQKGAFVAGSHTVGIEMEFTKNFGAGFFGGQGFILQRLTGPGDAFVRASGALIERTLAPGEVLRISSGSLVAFEPTVHFDIQRMQGVKNIMFAGEGLFVTTLTGPGRVFLQGMPFDRMVSEIASRVPGGGGMMFVP 345
BLAST of EWM21900.1 vs. NCBI_GenBank
Match: gi|1173959430|gb|OQS05667.1| (hypothetical protein THRCLA_02246 [Thraustotheca clavata]) HSP 1 Score: 296.59 bits (758), Expect = 1.977e-93 Identity = 152/258 (58.91%), Postives = 196/258 (75.97%), Query Frame = 0
Query: 76 QTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVP--RGGLGLGVPIGMGAGGGG 331
+T + +PIDF A+R+EG ETQIV +D+ P Q LR+E+G+++YMTDG+E++T GG+S GL R MTG+N F++++ Y G + +GTVA+GT PSKI+ + L YGGSLICQKGAFLCG+H +EMEFT++F GFFGGEGFVLQRL G GDAFI A GALI R L EGE R++SG LV F PSV +D+ + GVKNV+F G GLFVTTLTGPG V+LQ +PFDR+V IASR+P RGG + +P+G+G G G
Sbjct: 95 ETQVWEPIDFKKAARIEGTETQIVHIDIGPNQKLRSESGAMIYMTDGIEMDTHTAGGISQGLTRMMTGQNFFVTEYTYKGTD--TGTVAMGTSVPSKILHMPLEKYGGSLICQKGAFLCGSHTISIEMEFTKNFGAGFFGGEGFVLQRLNGPGDAFISANGALIERTLKEGEVFRISSGCLVAFEPSVHFDITSVSGVKNVLFSGTGLFVTTLTGPGRVYLQGLPFDRMVGEIASRIPGGRGGSPIIMPMGLGGGSSG 350 The following BLAST results are available for this feature:
BLAST of EWM21900.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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